RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 KIF13BQ9NQT8 1826 aa7.71□□□□□ -1.18
CLK1-207ENST00000461981 RGL3Q3MIN7 710 aa7.71□□□□□ -1.18
CLK1-207ENST00000461981 MTFR1LQ9H019 292 aa7.71□□□□□ -1.18
CLK1-207ENST00000461981 STK32BQ9NY57 414 aa7.71□□□□□ -1.18
CLK1-207ENST00000461981 APBA3O96018 575 aa7.7□□□□□ -1.18
CLK1-207ENST00000461981 EVA1CP58658 441 aa7.7□□□□□ -1.18
CLK1-207ENST00000461981 ARXQ96QS3 562 aa7.7□□□□□ -1.18
CLK1-207ENST00000461981 RGPD5Q99666 1765 aa7.7□□□□□ -1.18
CLK1-207ENST00000461981 C5P01031 1676 aa7.7□□□□□ -1.18
CLK1-207ENST00000461981 KIF20BQ96Q89 1820 aa7.7□□□□□ -1.18
CLK1-207ENST00000461981 CALD1Q05682 793 aaKnown RBP7.7□□□□□ -1.18
CLK1-207ENST00000461981 EN1Q05925 392 aaPredicted RBP7.7□□□□□ -1.18
CLK1-207ENST00000461981 EZH2Q15910 746 aaKnown RBP7.7□□□□□ -1.18
CLK1-207ENST00000461981 PLCD3Q8N3E9 789 aa7.7□□□□□ -1.18
CLK1-207ENST00000461981 CHMP4AQ9BY43 222 aa7.7□□□□□ -1.18
CLK1-207ENST00000461981 MINK1Q8N4C8 1332 aaPredicted RBP7.7□□□□□ -1.18
CLK1-207ENST00000461981 TUBGCP6Q96RT7 1819 aa7.7□□□□□ -1.18
CLK1-207ENST00000461981 HNRNPUQ00839 825 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLK1-207ENST00000461981 FLAD1Q8NFF5 587 aa7.69□□□□□ -1.18
CLK1-207ENST00000461981 SGIP1Q9BQI5 828 aa7.69□□□□□ -1.18
CLK1-207ENST00000461981 TTC21BQ7Z4L5 1316 aa7.69□□□□□ -1.18
CLK1-207ENST00000461981 TRAK1Q9UPV9 953 aa7.69□□□□□ -1.18
CLK1-207ENST00000461981 XPCQ01831 940 aaPredicted RBP7.68□□□□□ -1.18
CLK1-207ENST00000461981 DDB1Q16531 1140 aa7.68□□□□□ -1.18
CLK1-207ENST00000461981 CD163L1Q9NR16 1453 aa7.68□□□□□ -1.18
CLK1-207ENST00000461981 NFKBIBQ15653 356 aa7.68□□□□□ -1.18
CLK1-207ENST00000461981 PMFBP1Q8TBY8 1022 aa7.68□□□□□ -1.18
CLK1-207ENST00000461981 IPO4Q8TEX9 1081 aaKnown RBP7.67□□□□□ -1.18
CLK1-207ENST00000461981 ZHX1Q9UKY1 873 aaPredicted RBP7.67□□□□□ -1.18
CLK1-207ENST00000461981 TAF1LQ8IZX4 1826 aa7.67□□□□□ -1.18
CLK1-207ENST00000461981 R3HDM1Q15032 1099 aaKnown RBP7.67□□□□□ -1.18
CLK1-207ENST00000461981 ABTB2Q8N961 1025 aa7.67□□□□□ -1.18
CLK1-207ENST00000461981 CABLES1Q8TDN4 633 aa7.67□□□□□ -1.18
CLK1-207ENST00000461981 DOT1LQ8TEK3 1739 aa7.67□□□□□ -1.18
CLK1-207ENST00000461981 ANKRD36BQ8N2N9 1353 aa7.66□□□□□ -1.18
CLK1-207ENST00000461981 CNGB1Q14028 1251 aaPredicted RBP7.66□□□□□ -1.18
CLK1-207ENST00000461981 SIN3AQ96ST3 1273 aa7.66□□□□□ -1.18
CLK1-207ENST00000461981 SLC15A2Q16348 729 aa7.66□□□□□ -1.18
CLK1-207ENST00000461981 TRIM37O94972 964 aa7.65□□□□□ -1.18
CLK1-207ENST00000461981 YY1P25490 414 aa7.65□□□□□ -1.18
CLK1-207ENST00000461981 LARP1Q6PKG0 1096 aaKnown RBP7.65□□□□□ -1.18
CLK1-207ENST00000461981 ZFP91Q96JP5 570 aaPredicted RBP7.65□□□□□ -1.18
CLK1-207ENST00000461981 VGLL3A8MV65 326 aa7.65□□□□□ -1.18
CLK1-207ENST00000461981 BRD2P25440 801 aaKnown RBP7.65□□□□□ -1.18
CLK1-207ENST00000461981 PTGER2P43116 358 aa7.65□□□□□ -1.18
CLK1-207ENST00000461981 AMER1Q5JTC6 1135 aaPredicted RBP7.65□□□□□ -1.18
CLK1-207ENST00000461981 MAP3K19Q56UN5 1328 aa7.65□□□□□ -1.19
CLK1-207ENST00000461981 EXOC5O00471 708 aa7.65□□□□□ -1.19
CLK1-207ENST00000461981 GRIN3BO60391 1043 aa7.64□□□□□ -1.19
CLK1-207ENST00000461981 LMOD2Q6P5Q4 547 aa7.64□□□□□ -1.19
CLK1-207ENST00000461981 AKT1S1Q96B36 256 aa7.64□□□□□ -1.19
CLK1-207ENST00000461981 ADCY9O60503 1353 aa7.64□□□□□ -1.19
CLK1-207ENST00000461981 KTN1Q86UP2 1357 aaKnown RBP7.64□□□□□ -1.19
CLK1-207ENST00000461981 SMG6Q86US8 1419 aaKnown RBP7.64□□□□□ -1.19
CLK1-207ENST00000461981 ERBB3P21860 1342 aa7.63□□□□□ -1.19
CLK1-207ENST00000461981 ANP32CO43423 234 aa7.63□□□□□ -1.19
CLK1-207ENST00000461981 HDGFL2Q7Z4V5 671 aaPredicted RBP7.63□□□□□ -1.19
CLK1-207ENST00000461981 PDCL3Q9H2J4 239 aa7.63□□□□□ -1.19
CLK1-207ENST00000461981 TERF2IPQ9NYB0 399 aa7.63□□□□□ -1.19
CLK1-207ENST00000461981 PPP1R1BQ9UD71 204 aaPredicted RBP7.63□□□□□ -1.19
CLK1-207ENST00000461981 TXNRD1Q16881 649 aa7.63□□□□□ -1.19
CLK1-207ENST00000461981 IP6K1Q92551 441 aa7.63□□□□□ -1.19
CLK1-207ENST00000461981 ARID3AQ99856 593 aa7.63□□□□□ -1.19
CLK1-207ENST00000461981 IL2RBP14784 551 aa7.62□□□□□ -1.19
CLK1-207ENST00000461981 MARCH10Q8NA82 808 aaPredicted RBP7.62□□□□□ -1.19
CLK1-207ENST00000461981 MAP2P11137 1827 aaKnown RBP7.62□□□□□ -1.19
CLK1-207ENST00000461981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.62□□□□□ -1.196e-10■■□□□ 13.9
CLK1-207ENST00000461981 CD2APQ9Y5K6 639 aa7.62□□□□□ -1.19
CLK1-207ENST00000461981 KIAA1551Q9HCM1 1747 aa7.62□□□□□ -1.19
CLK1-207ENST00000461981 ARFGEF1Q9Y6D6 1849 aa7.61□□□□□ -1.19
CLK1-207ENST00000461981 SLC4A3P48751 1232 aa7.61□□□□□ -1.19
CLK1-207ENST00000461981 NLRP6P59044 892 aa7.61□□□□□ -1.19
CLK1-207ENST00000461981 KDM2AQ9Y2K7 1162 aa7.61□□□□□ -1.19
CLK1-207ENST00000461981 A0A0G2JS52 829 aa7.61□□□□□ -1.19
CLK1-207ENST00000461981 UBR3Q6ZT12 1888 aa7.61□□□□□ -1.19
CLK1-207ENST00000461981 PSDA5PKW4 1024 aaPredicted RBP7.61□□□□□ -1.19
CLK1-207ENST00000461981 POLD1P28340 1107 aa7.61□□□□□ -1.19
CLK1-207ENST00000461981 SRPK2P78362 688 aaKnown RBP7.61□□□□□ -1.19
CLK1-207ENST00000461981 CDCA8Q53HL2 280 aa7.61□□□□□ -1.19
CLK1-207ENST00000461981 TOM1L2Q6ZVM7 507 aa7.61□□□□□ -1.19
CLK1-207ENST00000461981 SMARCC1Q92922 1105 aaPredicted RBP7.61□□□□□ -1.19
CLK1-207ENST00000461981 ROCK2O75116 1388 aaKnown RBP7.6□□□□□ -1.19
CLK1-207ENST00000461981 CCER2I3L3R5 266 aa7.6□□□□□ -1.19
CLK1-207ENST00000461981 ZNF830Q96NB3 372 aaPredicted RBP7.6□□□□□ -1.19
CLK1-207ENST00000461981 HIRIP3Q9BW71 556 aaPredicted RBP7.6□□□□□ -1.19
CLK1-207ENST00000461981 STRN4Q9NRL3 753 aa7.6□□□□□ -1.19
CLK1-207ENST00000461981 C4BP0C0L5 1744 aa7.6□□□□□ -1.19
CLK1-207ENST00000461981 COL5A3P25940 1745 aaPredicted RBP7.6□□□□□ -1.19
CLK1-207ENST00000461981 NUTM2FA1L443 756 aa7.6□□□□□ -1.19
CLK1-207ENST00000461981 DDRGK1Q96HY6 314 aa7.6□□□□□ -1.19
CLK1-207ENST00000461981 PRDM10Q9NQV6 1147 aa7.6□□□□□ -1.19
CLK1-207ENST00000461981 INSRP06213 1382 aa7.6□□□□□ -1.19
CLK1-207ENST00000461981 TONSLQ96HA7 1378 aa7.6□□□□□ -1.19
CLK1-207ENST00000461981 TNRC6CQ9HCJ0 1690 aaKnown RBP7.6□□□□□ -1.19
CLK1-207ENST00000461981 FRAT2O75474 233 aaPredicted RBP7.59□□□□□ -1.19
CLK1-207ENST00000461981 ZC3H4Q9UPT8 1303 aaKnown RBP7.59□□□□□ -1.19
CLK1-207ENST00000461981 ZC3H6P61129 1189 aaKnown RBP7.59□□□□□ -1.19
CLK1-207ENST00000461981 NKX1-1Q15270 411 aaPredicted RBP7.59□□□□□ -1.19
CLK1-207ENST00000461981 SAMD1Q6SPF0 538 aaPredicted RBP7.59□□□□□ -1.19
CLK1-207ENST00000461981 TOGARAM1Q9Y4F4 1720 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms