RNA–Protein interactions for RNA: ENST00000461306.1

ITGB5-203, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-203ENST00000461306 ZCRB1Q8TBF4 217 aaKnown RBP15.35■□□□□ 0.05
ITGB5-203ENST00000461306 COG3Q96JB2 828 aa15.35■□□□□ 0.05
ITGB5-203ENST00000461306 CCNL1Q9UK58 526 aaPredicted RBP15.34■□□□□ 0.05
ITGB5-203ENST00000461306 MAP3K19Q56UN5 1328 aa15.34■□□□□ 0.05
ITGB5-203ENST00000461306 HOXC9P31274 260 aa15.33■□□□□ 0.04
ITGB5-203ENST00000461306 MSL1Q68DK7 614 aa15.33■□□□□ 0.04
ITGB5-203ENST00000461306 USP54Q70EL1 1684 aa15.32■□□□□ 0.04
ITGB5-203ENST00000461306 IFFO2Q5TF58 517 aa15.32■□□□□ 0.04
ITGB5-203ENST00000461306 COL23A1Q86Y22 540 aaPredicted RBP15.32■□□□□ 0.04
ITGB5-203ENST00000461306 USHBP1Q8N6Y0 703 aa15.32■□□□□ 0.04
ITGB5-203ENST00000461306 ANKRD36BQ8N2N9 1353 aa15.32■□□□□ 0.04
ITGB5-203ENST00000461306 RRS1Q15050 365 aaKnown RBP15.31■□□□□ 0.04
ITGB5-203ENST00000461306 YBX3P16989 372 aaKnown RBP eCLIP15.3■□□□□ 0.046e-7■■■□□ 16.7
ITGB5-203ENST00000461306 NBPF6Q5VWK0 638 aa15.3■□□□□ 0.04
ITGB5-203ENST00000461306 NBPF4Q96M43 638 aa15.3■□□□□ 0.04
ITGB5-203ENST00000461306 USP47Q96K76 1375 aa15.29■□□□□ 0.04
ITGB5-203ENST00000461306 ST20-MTHFSA0A0A6YYL1 179 aa15.29■□□□□ 0.04
ITGB5-203ENST00000461306 GRIN3BO60391 1043 aa15.29■□□□□ 0.04
ITGB5-203ENST00000461306 PUS7Q96PZ0 661 aaKnown RBP15.29■□□□□ 0.04
ITGB5-203ENST00000461306 NSD2O96028 1365 aa15.28■□□□□ 0.04
ITGB5-203ENST00000461306 GGNBP2Q9H3C7 697 aa15.28■□□□□ 0.04
ITGB5-203ENST00000461306 TUBGCP6Q96RT7 1819 aa15.28■□□□□ 0.04
ITGB5-203ENST00000461306 RGPD2P0DJD1 1756 aa15.28■□□□□ 0.04
ITGB5-203ENST00000461306 DOT1LQ8TEK3 1739 aa15.28■□□□□ 0.04
ITGB5-203ENST00000461306 SHANK3Q9BYB0 1731 aa15.28■□□□□ 0.04
ITGB5-203ENST00000461306 TONSLQ96HA7 1378 aa15.27■□□□□ 0.04
ITGB5-203ENST00000461306 QSER1Q2KHR3 1735 aa15.27■□□□□ 0.04
ITGB5-203ENST00000461306 TATP17735 454 aaPredicted RBP15.27■□□□□ 0.04
ITGB5-203ENST00000461306 RAPGEF4Q8WZA2 1011 aa15.27■□□□□ 0.04
ITGB5-203ENST00000461306 MEGF6O75095 1541 aa15.27■□□□□ 0.03
ITGB5-203ENST00000461306 MPRIPQ6WCQ1 1025 aa15.26■□□□□ 0.03
ITGB5-203ENST00000461306 TESK2Q96S53 571 aa15.25■□□□□ 0.03
ITGB5-203ENST00000461306 WWC3Q9ULE0 1092 aa15.25■□□□□ 0.03
ITGB5-203ENST00000461306 LY75O60449 1722 aa15.24■□□□□ 0.03
ITGB5-203ENST00000461306 COL24A1Q17RW2 1714 aa15.24■□□□□ 0.03
ITGB5-203ENST00000461306 FYB1O15117 783 aa15.24■□□□□ 0.03
ITGB5-203ENST00000461306 SMIM5Q71RC9 77 aa15.24■□□□□ 0.03
ITGB5-203ENST00000461306 FAM208AQ9UK61 1670 aaKnown RBP15.24■□□□□ 0.03
ITGB5-203ENST00000461306 HSP90AB2PQ58FF8 381 aa15.23■□□□□ 0.03
ITGB5-203ENST00000461306 ZNF526Q8TF50 670 aaPredicted RBP15.23■□□□□ 0.03
ITGB5-203ENST00000461306 CGNL1Q0VF96 1302 aa15.21■□□□□ 0.03
ITGB5-203ENST00000461306 PHF14O94880 888 aa15.21■□□□□ 0.03
ITGB5-203ENST00000461306 FLAD1Q8NFF5 587 aa15.21■□□□□ 0.03
ITGB5-203ENST00000461306 CD2APQ9Y5K6 639 aa15.21■□□□□ 0.03
ITGB5-203ENST00000461306 PALLDQ8WX93 1383 aa15.21■□□□□ 0.02
ITGB5-203ENST00000461306 SMG6Q86US8 1419 aaKnown RBP15.2■□□□□ 0.02
ITGB5-203ENST00000461306 ATP10DQ9P241 1426 aa15.2■□□□□ 0.02
ITGB5-203ENST00000461306 AK7Q96M32 723 aa15.2■□□□□ 0.02
ITGB5-203ENST00000461306 GPBP1L1Q9HC44 474 aaPredicted RBP15.2■□□□□ 0.02
ITGB5-203ENST00000461306 PCDH11XQ9BZA7 1347 aa15.19■□□□□ 0.02
ITGB5-203ENST00000461306 PCDH11YQ9BZA8 1340 aa15.19■□□□□ 0.02
ITGB5-203ENST00000461306 CYP27B1O15528 508 aa15.19■□□□□ 0.02
ITGB5-203ENST00000461306 SLC24A1O60721 1099 aa15.19■□□□□ 0.02
ITGB5-203ENST00000461306 RTL1A6NKG5 1358 aa15.19■□□□□ 0.02
ITGB5-203ENST00000461306 PPM1GO15355 546 aaPredicted RBP15.18■□□□□ 0.02
ITGB5-203ENST00000461306 TMF1P82094 1093 aa15.18■□□□□ 0.02
ITGB5-203ENST00000461306 AMIGO3Q86WK7 504 aa15.18■□□□□ 0.02
ITGB5-203ENST00000461306 PIGBQ92521 554 aa15.17■□□□□ 0.02
ITGB5-203ENST00000461306 SMARCC1Q92922 1105 aaPredicted RBP15.17■□□□□ 0.02
ITGB5-203ENST00000461306 INSRP06213 1382 aa15.16■□□□□ 0.02
ITGB5-203ENST00000461306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.16■□□□□ 0.02
ITGB5-203ENST00000461306 HMGB2P26583 209 aaKnown RBP15.16■□□□□ 0.02
ITGB5-203ENST00000461306 EMILIN1Q9Y6C2 1016 aa15.16■□□□□ 0.02
ITGB5-203ENST00000461306 C5P01031 1676 aa15.16■□□□□ 0.02
ITGB5-203ENST00000461306 IGSF1Q8N6C5 1336 aa15.15■□□□□ 0.02
ITGB5-203ENST00000461306 FLT4P35916 1363 aa15.13■□□□□ 0.01
ITGB5-203ENST00000461306 LINC00116Q8NCU8 138 aa15.13■□□□□ 0.01
ITGB5-203ENST00000461306 TAF1LQ8IZX4 1826 aa15.13■□□□□ 0.01
ITGB5-203ENST00000461306 LOC102724428A0A0B4J2F2 783 aa15.12■□□□□ 0.01
ITGB5-203ENST00000461306 HSPA6P17066 643 aa15.12■□□□□ 0.01
ITGB5-203ENST00000461306 SIK1P57059 783 aa15.12■□□□□ 0.01
ITGB5-203ENST00000461306 CARD14Q9BXL6 1004 aa15.12■□□□□ 0.01
ITGB5-203ENST00000461306 ASAP1Q9ULH1 1129 aa15.12■□□□□ 0.01
ITGB5-203ENST00000461306 SPG7Q9UQ90 795 aa15.12■□□□□ 0.01
ITGB5-203ENST00000461306 C4BP0C0L5 1744 aa15.12■□□□□ 0.01
ITGB5-203ENST00000461306 ITGB4P16144 1822 aa15.11■□□□□ 0.01
ITGB5-203ENST00000461306 ATP6V1AP38606 617 aa15.11■□□□□ 0.01
ITGB5-203ENST00000461306 TMOD3Q9NYL9 352 aa15.11■□□□□ 0.01
ITGB5-203ENST00000461306 GNPATO15228 680 aa15.1■□□□□ 0.01
ITGB5-203ENST00000461306 SSFA2P28290 1259 aa15.1■□□□□ 0.01
ITGB5-203ENST00000461306 NKX1-1Q15270 411 aaPredicted RBP15.1■□□□□ 0.01
ITGB5-203ENST00000461306 ADCY9O60503 1353 aa15.1■□□□□ 0.01
ITGB5-203ENST00000461306 ITPK1Q13572 414 aa15.09■□□□□ 0.01
ITGB5-203ENST00000461306 CDCA8Q53HL2 280 aa15.09■□□□□ 0.01
ITGB5-203ENST00000461306 EYA1Q99502 592 aa15.09■□□□□ 0.01
ITGB5-203ENST00000461306 TOGARAM1Q9Y4F4 1720 aa15.09■□□□□ 0.01
ITGB5-203ENST00000461306 MMP10P09238 476 aa15.08■□□□□ 0
ITGB5-203ENST00000461306 TNNT2P45379 298 aaPredicted RBP15.07■□□□□ 0
ITGB5-203ENST00000461306 IFNL2Q8IZJ0 200 aa15.07■□□□□ 0
ITGB5-203ENST00000461306 ATG3Q9NT62 314 aa15.07■□□□□ 0
ITGB5-203ENST00000461306 KIF20BQ96Q89 1820 aa15.07■□□□□ 0
ITGB5-203ENST00000461306 UBR3Q6ZT12 1888 aa15.07■□□□□ 0
ITGB5-203ENST00000461306 KIF24Q5T7B8 1368 aa15.07■□□□□ 0
ITGB5-203ENST00000461306 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
ITGB5-203ENST00000461306 A0A0G2JLW4 131 aa15.06■□□□□ 0
ITGB5-203ENST00000461306 KIF3CO14782 793 aa15.06■□□□□ 0
ITGB5-203ENST00000461306 PHKG2P15735 406 aa15.06■□□□□ 0
ITGB5-203ENST00000461306 POLR3GLQ9BT43 218 aa15.06■□□□□ 0
ITGB5-203ENST00000461306 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
ITGB5-203ENST00000461306 BCS1LQ9Y276 419 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms