RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 COL5A2P05997 1499 aaPredicted RBP31.63■■■□□ 2.65
U2AF1-204ENST00000459639 CRB1P82279 1406 aa31.63■■■□□ 2.65
U2AF1-204ENST00000459639 GNAT3A8MTJ3 354 aa31.63■■■□□ 2.65
U2AF1-204ENST00000459639 CSB-PGBD3P0DP91 1061 aa31.63■■■□□ 2.65
U2AF1-204ENST00000459639 AMOTQ4VCS5 1084 aa31.62■■■□□ 2.65
U2AF1-204ENST00000459639 MCM10Q7L590 875 aa31.62■■■□□ 2.65
U2AF1-204ENST00000459639 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.62■■■□□ 2.65
U2AF1-204ENST00000459639 NLRP2Q9NX02 1062 aa31.62■■■□□ 2.65
U2AF1-204ENST00000459639 LAS1LQ9Y4W2 734 aaKnown RBP31.62■■■□□ 2.65
U2AF1-204ENST00000459639 COL14A1Q05707 1796 aaKnown RBP31.62■■■□□ 2.65
U2AF1-204ENST00000459639 PLEKHO1Q53GL0 409 aaPredicted RBP31.6■■■□□ 2.65
U2AF1-204ENST00000459639 UBAP1LF5GYI3 381 aa31.59■■■□□ 2.65
U2AF1-204ENST00000459639 RARSP54136 660 aaKnown RBP31.59■■■□□ 2.65
U2AF1-204ENST00000459639 MBIPQ9NS73 344 aa31.59■■■□□ 2.65
U2AF1-204ENST00000459639 VIRMAQ69YN4 1812 aaKnown RBP31.59■■■□□ 2.65
U2AF1-204ENST00000459639 WDR17Q8IZU2 1322 aa31.58■■■□□ 2.65
U2AF1-204ENST00000459639 PIP4K2BP78356 416 aa31.57■■■□□ 2.65
U2AF1-204ENST00000459639 PKD1L3Q7Z443 1732 aa31.56■■■□□ 2.64
U2AF1-204ENST00000459639 BCAR3O75815 825 aa31.56■■■□□ 2.64
U2AF1-204ENST00000459639 PARP4Q9UKK3 1724 aaKnown RBP31.56■■■□□ 2.64
U2AF1-204ENST00000459639 PLIN1O60240 522 aa31.55■■■□□ 2.64
U2AF1-204ENST00000459639 RAPGEF4Q8WZA2 1011 aa31.55■■■□□ 2.64
U2AF1-204ENST00000459639 CHL1O00533 1208 aa31.54■■■□□ 2.64
U2AF1-204ENST00000459639 AKAP4Q5JQC9 854 aa31.54■■■□□ 2.64
U2AF1-204ENST00000459639 MEGF6O75095 1541 aa31.53■■■□□ 2.64
U2AF1-204ENST00000459639 ZNF530Q6P9A1 599 aaPredicted RBP31.53■■■□□ 2.64
U2AF1-204ENST00000459639 ZNF428Q96B54 188 aa31.52■■■□□ 2.64
U2AF1-204ENST00000459639 PPP4R2Q9NY27 417 aa31.52■■■□□ 2.64
U2AF1-204ENST00000459639 CEMIPQ8WUJ3 1361 aa31.52■■■□□ 2.64
U2AF1-204ENST00000459639 ADAMTS7Q9UKP4 1686 aa31.51■■■□□ 2.64
U2AF1-204ENST00000459639 TATP17735 454 aaPredicted RBP31.51■■■□□ 2.64
U2AF1-204ENST00000459639 OVOS2A0A0G2JMS6 1433 aa31.51■■■□□ 2.64
U2AF1-204ENST00000459639 CERKQ8TCT0 537 aa31.51■■■□□ 2.63
U2AF1-204ENST00000459639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.5■■■□□ 2.63
U2AF1-204ENST00000459639 IL17REQ8NFR9 667 aa31.49■■■□□ 2.63
U2AF1-204ENST00000459639 C1orf141Q5JVX7 400 aa31.48■■■□□ 2.63
U2AF1-204ENST00000459639 TOM1L2Q6ZVM7 507 aa31.48■■■□□ 2.63
U2AF1-204ENST00000459639 PLCH1Q4KWH8 1693 aa31.47■■■□□ 2.63
U2AF1-204ENST00000459639 BABAM1Q9NWV8 329 aa31.47■■■□□ 2.63
U2AF1-204ENST00000459639 ALDH1L2Q3SY69 923 aa31.46■■■□□ 2.63
U2AF1-204ENST00000459639 CARD10Q9BWT7 1032 aa31.46■■■□□ 2.63
U2AF1-204ENST00000459639 SPG7Q9UQ90 795 aa31.45■■■□□ 2.63
U2AF1-204ENST00000459639 SCN11AQ9UI33 1791 aa31.44■■■□□ 2.62
U2AF1-204ENST00000459639 VAMP4O75379 141 aa31.44■■■□□ 2.62
U2AF1-204ENST00000459639 EVA1CP58658 441 aa31.44■■■□□ 2.62
U2AF1-204ENST00000459639 KDM3BQ7LBC6 1761 aa31.43■■■□□ 2.62
U2AF1-204ENST00000459639 TWISTNBQ3B726 338 aaPredicted RBP31.43■■■□□ 2.62
U2AF1-204ENST00000459639 C20orf194Q5TEA3 1177 aa31.43■■■□□ 2.62
U2AF1-204ENST00000459639 SSH1Q8WYL5 1049 aa31.43■■■□□ 2.62
U2AF1-204ENST00000459639 SMC4Q9NTJ3 1288 aa31.43■■■□□ 2.62
U2AF1-204ENST00000459639 TSPYL4Q9UJ04 414 aa31.43■■■□□ 2.62
U2AF1-204ENST00000459639 SIPA1L3O60292 1781 aaPredicted RBP31.43■■■□□ 2.62
U2AF1-204ENST00000459639 CANXP27824 592 aaKnown RBP31.42■■■□□ 2.62
U2AF1-204ENST00000459639 EXOC6Q8TAG9 804 aa31.42■■■□□ 2.62
U2AF1-204ENST00000459639 BCL2L13Q9BXK5 485 aa31.42■■■□□ 2.62
U2AF1-204ENST00000459639 STRN4Q9NRL3 753 aa31.42■■■□□ 2.62
U2AF1-204ENST00000459639 PDE3AQ14432 1141 aa31.41■■■□□ 2.62
U2AF1-204ENST00000459639 TAF7Q15545 349 aaPredicted RBP31.41■■■□□ 2.62
U2AF1-204ENST00000459639 TSPYL6Q8N831 410 aa31.41■■■□□ 2.62
U2AF1-204ENST00000459639 C8orf58Q8NAV2 365 aa31.41■■■□□ 2.62
U2AF1-204ENST00000459639 BTG4Q9NY30 223 aa31.41■■■□□ 2.62
U2AF1-204ENST00000459639 LARP1Q6PKG0 1096 aaKnown RBP31.41■■■□□ 2.62
U2AF1-204ENST00000459639 NRAPQ86VF7 1730 aa31.4■■■□□ 2.62
U2AF1-204ENST00000459639 CRBNQ96SW2 442 aa31.4■■■□□ 2.62
U2AF1-204ENST00000459639 RNMTO43148 476 aaKnown RBP31.39■■■□□ 2.62
U2AF1-204ENST00000459639 BRPF1P55201 1214 aaPredicted RBP31.38■■■□□ 2.61
U2AF1-204ENST00000459639 FRAT1Q92837 279 aaPredicted RBP31.38■■■□□ 2.61
U2AF1-204ENST00000459639 LGR6Q9HBX8 967 aa31.38■■■□□ 2.61
U2AF1-204ENST00000459639 NWD2Q9ULI1 1742 aa31.38■■■□□ 2.61
U2AF1-204ENST00000459639 KIF16BQ96L93 1317 aa31.37■■■□□ 2.61
U2AF1-204ENST00000459639 MPRIPQ6WCQ1 1025 aa31.37■■■□□ 2.61
U2AF1-204ENST00000459639 MIS18AQ9NYP9 233 aa31.36■■■□□ 2.61
U2AF1-204ENST00000459639 SHANK3Q9BYB0 1731 aa31.36■■■□□ 2.61
U2AF1-204ENST00000459639 JCADQ9P266 1359 aa31.36■■■□□ 2.61
U2AF1-204ENST00000459639 PHKG2P15735 406 aa31.35■■■□□ 2.61
U2AF1-204ENST00000459639 IFNL2Q8IZJ0 200 aa31.35■■■□□ 2.61
U2AF1-204ENST00000459639 WNK3Q9BYP7 1800 aa31.35■■■□□ 2.61
U2AF1-204ENST00000459639 ELL2O00472 640 aaPredicted RBP31.35■■■□□ 2.61
U2AF1-204ENST00000459639 TEFQ10587 303 aa31.35■■■□□ 2.61
U2AF1-204ENST00000459639 ZKSCAN2Q63HK3 967 aa31.35■■■□□ 2.61
U2AF1-204ENST00000459639 IL2RBP14784 551 aa31.34■■■□□ 2.61
U2AF1-204ENST00000459639 KDM6AO15550 1401 aaPredicted RBP31.33■■■□□ 2.61
U2AF1-204ENST00000459639 SOS1Q07889 1333 aaPredicted RBP31.32■■■□□ 2.6
U2AF1-204ENST00000459639 MS4A1P11836 297 aa31.32■■■□□ 2.6
U2AF1-204ENST00000459639 MRC1P22897 1456 aa31.31■■■□□ 2.6
U2AF1-204ENST00000459639 ADAMTS2O95450 1211 aa31.31■■■□□ 2.6
U2AF1-204ENST00000459639 KRT24Q2M2I5 525 aa31.31■■■□□ 2.6
U2AF1-204ENST00000459639 HSP90AB1P08238 724 aaKnown RBP31.3■■■□□ 2.6
U2AF1-204ENST00000459639 PCDH11XQ9BZA7 1347 aa31.3■■■□□ 2.6
U2AF1-204ENST00000459639 PCDH11YQ9BZA8 1340 aa31.3■■■□□ 2.6
U2AF1-204ENST00000459639 CYP27B1O15528 508 aa31.29■■■□□ 2.6
U2AF1-204ENST00000459639 MRPL50Q8N5N7 158 aaKnown RBP31.29■■■□□ 2.6
U2AF1-204ENST00000459639 IPO8O15397 1037 aaKnown RBP31.29■■■□□ 2.6
U2AF1-204ENST00000459639 B4GALNT3Q6L9W6 998 aa31.29■■■□□ 2.6
U2AF1-204ENST00000459639 ZCRB1Q8TBF4 217 aaKnown RBP31.29■■■□□ 2.6
U2AF1-204ENST00000459639 NUTM2BA6NNL0 878 aaPredicted RBP31.28■■■□□ 2.6
U2AF1-204ENST00000459639 NUTM2EB1AL46 878 aaPredicted RBP31.28■■■□□ 2.6
U2AF1-204ENST00000459639 NUTM2AQ8IVF1 878 aaPredicted RBP31.28■■■□□ 2.6
U2AF1-204ENST00000459639 NOB1Q9ULX3 412 aaKnown RBP31.28■■■□□ 2.6
U2AF1-204ENST00000459639 ATF7IPQ6VMQ6 1270 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms