RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 PROM2Q8N271 834 aa23.98■■□□□ 1.43
SCARNA2-201ENST00000458748 DDX54Q8TDD1 881 aaKnown RBP23.98■■□□□ 1.43
SCARNA2-201ENST00000458748 WASHC2AQ641Q2 1341 aa23.98■■□□□ 1.43
SCARNA2-201ENST00000458748 MEGF6O75095 1541 aa23.98■■□□□ 1.43
SCARNA2-201ENST00000458748 RAPGEF4Q8WZA2 1011 aa23.97■■□□□ 1.43
SCARNA2-201ENST00000458748 ACSBG1Q96GR2 724 aa23.97■■□□□ 1.43
SCARNA2-201ENST00000458748 SHANK3Q9BYB0 1731 aa23.97■■□□□ 1.43
SCARNA2-201ENST00000458748 POLKQ9UBT6 870 aa23.96■■□□□ 1.43
SCARNA2-201ENST00000458748 BTAF1O14981 1849 aa23.96■■□□□ 1.43
SCARNA2-201ENST00000458748 TATP17735 454 aaPredicted RBP23.94■■□□□ 1.42
SCARNA2-201ENST00000458748 TXNRD1Q16881 649 aa23.94■■□□□ 1.42
SCARNA2-201ENST00000458748 MORC1Q86VD1 984 aa23.94■■□□□ 1.42
SCARNA2-201ENST00000458748 USHBP1Q8N6Y0 703 aa23.94■■□□□ 1.42
SCARNA2-201ENST00000458748 TNNT2P45379 298 aaPredicted RBP23.93■■□□□ 1.42
SCARNA2-201ENST00000458748 SPON1Q9HCB6 807 aa23.93■■□□□ 1.42
SCARNA2-201ENST00000458748 NCAPD2Q15021 1401 aa23.93■■□□□ 1.42
SCARNA2-201ENST00000458748 PDGFDQ9GZP0 370 aaPredicted RBP23.9■■□□□ 1.42
SCARNA2-201ENST00000458748 DOT1LQ8TEK3 1739 aa23.9■■□□□ 1.42
SCARNA2-201ENST00000458748 PPP1R1BQ9UD71 204 aaPredicted RBP23.89■■□□□ 1.41
SCARNA2-201ENST00000458748 PCDH11XQ9BZA7 1347 aa23.88■■□□□ 1.41
SCARNA2-201ENST00000458748 PCDH11YQ9BZA8 1340 aa23.88■■□□□ 1.41
SCARNA2-201ENST00000458748 STK32BQ9NY57 414 aa23.87■■□□□ 1.41
SCARNA2-201ENST00000458748 PKD1L3Q7Z443 1732 aa23.87■■□□□ 1.41
SCARNA2-201ENST00000458748 PRIM1P49642 420 aaKnown RBP23.86■■□□□ 1.41
SCARNA2-201ENST00000458748 EYA1Q99502 592 aa23.86■■□□□ 1.41
SCARNA2-201ENST00000458748 CASZ1Q86V15 1759 aa23.86■■□□□ 1.41
SCARNA2-201ENST00000458748 PLEKHG2Q9H7P9 1386 aa23.84■■□□□ 1.41
SCARNA2-201ENST00000458748 ZBTB7AO95365 584 aa23.84■■□□□ 1.41
SCARNA2-201ENST00000458748 EIF4A2Q14240 407 aaKnown RBP23.84■■□□□ 1.41
SCARNA2-201ENST00000458748 SLC15A2Q16348 729 aa23.84■■□□□ 1.41
SCARNA2-201ENST00000458748 AMER1Q5JTC6 1135 aaPredicted RBP23.84■■□□□ 1.41
SCARNA2-201ENST00000458748 SYTL4Q96C24 671 aaPredicted RBP23.84■■□□□ 1.41
SCARNA2-201ENST00000458748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.83■■□□□ 1.41
SCARNA2-201ENST00000458748 SLC27A3Q5K4L6 730 aa23.82■■□□□ 1.4
SCARNA2-201ENST00000458748 SPG7Q9UQ90 795 aa23.82■■□□□ 1.4
SCARNA2-201ENST00000458748 PAPPAQ13219 1627 aa23.81■■□□□ 1.4
SCARNA2-201ENST00000458748 LY75O60449 1722 aa23.81■■□□□ 1.4
SCARNA2-201ENST00000458748 CYP27B1O15528 508 aa23.8■■□□□ 1.4
SCARNA2-201ENST00000458748 PER1O15534 1290 aaPredicted RBP23.8■■□□□ 1.4
SCARNA2-201ENST00000458748 ATF5Q9Y2D1 282 aaPredicted RBP23.8■■□□□ 1.4
SCARNA2-201ENST00000458748 IGSF1Q8N6C5 1336 aa23.79■■□□□ 1.4
SCARNA2-201ENST00000458748 NKX1-1Q15270 411 aaPredicted RBP23.78■■□□□ 1.4
SCARNA2-201ENST00000458748 NPC1L1Q9UHC9 1359 aa23.78■■□□□ 1.4
SCARNA2-201ENST00000458748 LRRC4BQ9NT99 713 aa23.77■■□□□ 1.4
SCARNA2-201ENST00000458748 PTGER2P43116 358 aa23.76■■□□□ 1.39
SCARNA2-201ENST00000458748 CC2D1BQ5T0F9 858 aaKnown RBP23.76■■□□□ 1.39
SCARNA2-201ENST00000458748 ITGB4P16144 1822 aa23.75■■□□□ 1.39
SCARNA2-201ENST00000458748 HMGB2P26583 209 aaKnown RBP23.75■■□□□ 1.39
SCARNA2-201ENST00000458748 ZNF827Q17R98 1081 aa23.74■■□□□ 1.39
SCARNA2-201ENST00000458748 QSER1Q2KHR3 1735 aa23.73■■□□□ 1.39
SCARNA2-201ENST00000458748 TOGARAM1Q9Y4F4 1720 aa23.73■■□□□ 1.39
SCARNA2-201ENST00000458748 IFNL2Q8IZJ0 200 aa23.73■■□□□ 1.39
SCARNA2-201ENST00000458748 MTFR1LQ9H019 292 aa23.72■■□□□ 1.39
SCARNA2-201ENST00000458748 AKT1S1Q96B36 256 aa23.71■■□□□ 1.39
SCARNA2-201ENST00000458748 PHKG2P15735 406 aa23.7■■□□□ 1.38
SCARNA2-201ENST00000458748 MTHFSP49914 203 aa23.7■■□□□ 1.38
SCARNA2-201ENST00000458748 KCNQ4P56696 695 aa23.7■■□□□ 1.38
SCARNA2-201ENST00000458748 MPRIPQ6WCQ1 1025 aa23.7■■□□□ 1.38
SCARNA2-201ENST00000458748 CCNL1Q9UK58 526 aaPredicted RBP23.7■■□□□ 1.38
SCARNA2-201ENST00000458748 AMOTQ4VCS5 1084 aa23.69■■□□□ 1.38
SCARNA2-201ENST00000458748 PLEKHO1Q53GL0 409 aaPredicted RBP23.69■■□□□ 1.38
SCARNA2-201ENST00000458748 SMARCC1Q92922 1105 aaPredicted RBP23.69■■□□□ 1.38
SCARNA2-201ENST00000458748 DCAF8L1A6NGE4 600 aa23.68■■□□□ 1.38
SCARNA2-201ENST00000458748 IL13P35225 146 aa23.68■■□□□ 1.38
SCARNA2-201ENST00000458748 HSP90AB1P08238 724 aaKnown RBP23.67■■□□□ 1.38
SCARNA2-201ENST00000458748 SGIP1Q9BQI5 828 aa23.67■■□□□ 1.38
SCARNA2-201ENST00000458748 KDRP35968 1356 aa23.66■■□□□ 1.38
SCARNA2-201ENST00000458748 PALLDQ8WX93 1383 aa23.66■■□□□ 1.38
SCARNA2-201ENST00000458748 FHDC1Q9C0D6 1143 aaPredicted RBP23.66■■□□□ 1.38
SCARNA2-201ENST00000458748 YY1P25490 414 aa23.65■■□□□ 1.38
SCARNA2-201ENST00000458748 CNGB1Q14028 1251 aaPredicted RBP23.65■■□□□ 1.38
SCARNA2-201ENST00000458748 SLC16A10Q8TF71 515 aa23.65■■□□□ 1.38
SCARNA2-201ENST00000458748 PIGBQ92521 554 aa23.65■■□□□ 1.38
SCARNA2-201ENST00000458748 C5P01031 1676 aa23.64■■□□□ 1.38
SCARNA2-201ENST00000458748 TAF1LQ8IZX4 1826 aa23.64■■□□□ 1.38
SCARNA2-201ENST00000458748 DIAPH1O60610 1272 aaKnown RBP23.64■■□□□ 1.37
SCARNA2-201ENST00000458748 SULT6B1Q6IMI4 303 aa23.64■■□□□ 1.37
SCARNA2-201ENST00000458748 TMOD3Q9NYL9 352 aa23.64■■□□□ 1.37
SCARNA2-201ENST00000458748 TFCP2L1Q9NZI6 479 aa23.64■■□□□ 1.37
SCARNA2-201ENST00000458748 TUBGCP6Q96RT7 1819 aa23.63■■□□□ 1.37
SCARNA2-201ENST00000458748 SYT17Q9BSW7 474 aa23.63■■□□□ 1.37
SCARNA2-201ENST00000458748 AEBP1Q8IUX7 1158 aa23.62■■□□□ 1.37
SCARNA2-201ENST00000458748 DCAF5Q96JK2 942 aa23.62■■□□□ 1.37
SCARNA2-201ENST00000458748 PNPLA7Q6ZV29 1317 aa23.61■■□□□ 1.37
SCARNA2-201ENST00000458748 ERVV-2B6SEH9 535 aa23.61■■□□□ 1.37
SCARNA2-201ENST00000458748 C1orf141Q5JVX7 400 aa23.61■■□□□ 1.37
SCARNA2-201ENST00000458748 ZNF530Q6P9A1 599 aaPredicted RBP23.61■■□□□ 1.37
SCARNA2-201ENST00000458748 CFAP53Q96M91 514 aa23.61■■□□□ 1.37
SCARNA2-201ENST00000458748 ARXQ96QS3 562 aa23.61■■□□□ 1.37
SCARNA2-201ENST00000458748 COL24A1Q17RW2 1714 aa23.59■■□□□ 1.37
SCARNA2-201ENST00000458748 FLAD1Q8NFF5 587 aa23.56■■□□□ 1.36
SCARNA2-201ENST00000458748 C4BP0C0L5 1744 aa23.56■■□□□ 1.36
SCARNA2-201ENST00000458748 LOC102724428A0A0B4J2F2 783 aa23.55■■□□□ 1.36
SCARNA2-201ENST00000458748 SIK1P57059 783 aa23.55■■□□□ 1.36
SCARNA2-201ENST00000458748 ASAP1Q9ULH1 1129 aa23.55■■□□□ 1.36
SCARNA2-201ENST00000458748 KDM6AO15550 1401 aaPredicted RBP23.54■■□□□ 1.36
SCARNA2-201ENST00000458748 ZEB1P37275 1124 aaPredicted RBP23.54■■□□□ 1.36
SCARNA2-201ENST00000458748 ATG3Q9NT62 314 aa23.54■■□□□ 1.36
SCARNA2-201ENST00000458748 NUDCQ9Y266 331 aa23.54■■□□□ 1.36
SCARNA2-201ENST00000458748 COL3A1P02461 1466 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms