RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 MSNP26038 577 aaKnown RBP16.84■□□□□ 0.29
TOP3B-213ENST00000457179 ZC3H6P61129 1189 aaKnown RBP16.84■□□□□ 0.29
TOP3B-213ENST00000457179 SLC4A10Q6U841 1118 aa16.84■□□□□ 0.29
TOP3B-213ENST00000457179 LNPKQ9C0E8 428 aa16.84■□□□□ 0.29
TOP3B-213ENST00000457179 COL3A1P02461 1466 aaPredicted RBP16.83■□□□□ 0.29
TOP3B-213ENST00000457179 LRRC59Q96AG4 307 aaKnown RBP16.83■□□□□ 0.29
TOP3B-213ENST00000457179 SETD1BQ9UPS6 1966 aaKnown RBP16.83■□□□□ 0.28
TOP3B-213ENST00000457179 MAP2P11137 1827 aaKnown RBP16.83■□□□□ 0.28
TOP3B-213ENST00000457179 VAMP4O75379 141 aa16.83■□□□□ 0.28
TOP3B-213ENST00000457179 DDX19BQ9UMR2 479 aa16.83■□□□□ 0.28
TOP3B-213ENST00000457179 IPO8O15397 1037 aaKnown RBP16.83■□□□□ 0.28
TOP3B-213ENST00000457179 HSCBQ8IWL3 235 aa16.82■□□□□ 0.28
TOP3B-213ENST00000457179 C22orf23Q9BZE7 217 aa16.82■□□□□ 0.28
TOP3B-213ENST00000457179 TECPR2O15040 1411 aa16.82■□□□□ 0.28
TOP3B-213ENST00000457179 LRRC7Q96NW7 1537 aa16.82■□□□□ 0.28
TOP3B-213ENST00000457179 FOXD4L1Q9NU39 408 aa16.82■□□□□ 0.28
TOP3B-213ENST00000457179 TSPYL4Q9UJ04 414 aa16.82■□□□□ 0.28
TOP3B-213ENST00000457179 C3P01024 1663 aa16.82■□□□□ 0.28
TOP3B-213ENST00000457179 CFAP44Q96MT7 982 aa16.81■□□□□ 0.28
TOP3B-213ENST00000457179 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.81■□□□□ 0.28
TOP3B-213ENST00000457179 CABLES1Q8TDN4 633 aa16.81■□□□□ 0.28
TOP3B-213ENST00000457179 LMOD3Q0VAK6 560 aa16.8■□□□□ 0.28
TOP3B-213ENST00000457179 ANP32BQ92688 251 aaKnown RBP16.8■□□□□ 0.28
TOP3B-213ENST00000457179 ZSCAN30Q86W11 494 aa16.8■□□□□ 0.28
TOP3B-213ENST00000457179 USP32Q8NFA0 1604 aa16.79■□□□□ 0.28
TOP3B-213ENST00000457179 FER1L4A9Z1Z3 1794 aa16.79■□□□□ 0.28
TOP3B-213ENST00000457179 NASPP49321 788 aaPredicted RBP16.79■□□□□ 0.28
TOP3B-213ENST00000457179 OFD1O75665 1012 aa16.78■□□□□ 0.28
TOP3B-213ENST00000457179 HOXC9P31274 260 aa16.78■□□□□ 0.28
TOP3B-213ENST00000457179 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.78■□□□□ 0.28
TOP3B-213ENST00000457179 IFT57Q9NWB7 429 aa16.78■□□□□ 0.28
TOP3B-213ENST00000457179 TNPO1Q92973 898 aaKnown RBP16.78■□□□□ 0.28
TOP3B-213ENST00000457179 F6X3S4 739 aa16.78■□□□□ 0.28
TOP3B-213ENST00000457179 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
TOP3B-213ENST00000457179 KIF16BQ96L93 1317 aa16.77■□□□□ 0.28
TOP3B-213ENST00000457179 ISY1Q9ULR0 285 aaKnown RBP16.77■□□□□ 0.28
TOP3B-213ENST00000457179 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.28
TOP3B-213ENST00000457179 MED14O60244 1454 aa16.77■□□□□ 0.28
TOP3B-213ENST00000457179 SETD1AO15047 1707 aaKnown RBP16.77■□□□□ 0.28
TOP3B-213ENST00000457179 CT47B1P0C2W7 299 aaPredicted RBP16.77■□□□□ 0.27
TOP3B-213ENST00000457179 EIF2S2P20042 333 aaKnown RBP16.77■□□□□ 0.27
TOP3B-213ENST00000457179 CDC42BPGQ6DT37 1551 aa16.76■□□□□ 0.27
TOP3B-213ENST00000457179 UQCRHLA0A096LP55 91 aa16.76■□□□□ 0.27
TOP3B-213ENST00000457179 UQCRHP07919 91 aa16.76■□□□□ 0.27
TOP3B-213ENST00000457179 CCDC173Q0VFZ6 552 aa16.76■□□□□ 0.27
TOP3B-213ENST00000457179 ZBTB40Q9NUA8 1239 aa16.76■□□□□ 0.27
TOP3B-213ENST00000457179 ANKRD45Q5TZF3 282 aa16.76■□□□□ 0.27
TOP3B-213ENST00000457179 IL16Q14005 1332 aa16.75■□□□□ 0.27
TOP3B-213ENST00000457179 TTC21AQ8NDW8 1320 aa16.75■□□□□ 0.27
TOP3B-213ENST00000457179 RIMS1Q86UR5 1692 aaKnown RBP16.75■□□□□ 0.27
TOP3B-213ENST00000457179 FGD1P98174 961 aa16.75■□□□□ 0.27
TOP3B-213ENST00000457179 ADGRB2O60241 1585 aa16.75■□□□□ 0.27
TOP3B-213ENST00000457179 FLT4P35916 1363 aa16.74■□□□□ 0.27
TOP3B-213ENST00000457179 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
TOP3B-213ENST00000457179 ATF3P18847 181 aa16.74■□□□□ 0.27
TOP3B-213ENST00000457179 NBPF6Q5VWK0 638 aa16.74■□□□□ 0.27
TOP3B-213ENST00000457179 MRPL50Q8N5N7 158 aaKnown RBP16.74■□□□□ 0.27
TOP3B-213ENST00000457179 NBPF4Q96M43 638 aa16.74■□□□□ 0.27
TOP3B-213ENST00000457179 GBP4Q96PP9 640 aa16.74■□□□□ 0.27
TOP3B-213ENST00000457179 CHRNA2Q15822 529 aa16.73■□□□□ 0.27
TOP3B-213ENST00000457179 MPRIPQ6WCQ1 1025 aa16.73■□□□□ 0.27
TOP3B-213ENST00000457179 CDK12Q9NYV4 1490 aaPredicted RBP16.72■□□□□ 0.27
TOP3B-213ENST00000457179 GCP02774 474 aa16.72■□□□□ 0.27
TOP3B-213ENST00000457179 HDAC1Q13547 482 aaPredicted RBP16.72■□□□□ 0.27
TOP3B-213ENST00000457179 G2E3Q7L622 706 aa16.72■□□□□ 0.27
TOP3B-213ENST00000457179 KRT28Q7Z3Y7 464 aa16.72■□□□□ 0.27
TOP3B-213ENST00000457179 OVOS2A0A0J9YW53 1432 aa16.72■□□□□ 0.27
TOP3B-213ENST00000457179 OVOS2Q6IE36 1432 aa16.72■□□□□ 0.27
TOP3B-213ENST00000457179 ANXA1P04083 346 aa16.71■□□□□ 0.27
TOP3B-213ENST00000457179 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.27
TOP3B-213ENST00000457179 MAP7D2Q96T17 732 aa16.71■□□□□ 0.27
TOP3B-213ENST00000457179 ARHGAP23Q9P227 1491 aa16.71■□□□□ 0.27
TOP3B-213ENST00000457179 NCLP19338 710 aaKnown RBP16.71■□□□□ 0.26
TOP3B-213ENST00000457179 KIF20BQ96Q89 1820 aa16.7■□□□□ 0.26
TOP3B-213ENST00000457179 CEP170BQ9Y4F5 1589 aaPredicted RBP16.7■□□□□ 0.26
TOP3B-213ENST00000457179 LGR6Q9HBX8 967 aa16.7■□□□□ 0.26
TOP3B-213ENST00000457179 ZNF853P0CG23 659 aa16.7■□□□□ 0.26
TOP3B-213ENST00000457179 ALDH1L2Q3SY69 923 aa16.7■□□□□ 0.26
TOP3B-213ENST00000457179 SMC5Q8IY18 1101 aa16.7■□□□□ 0.26
TOP3B-213ENST00000457179 NLRP2Q9NX02 1062 aa16.7■□□□□ 0.26
TOP3B-213ENST00000457179 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
TOP3B-213ENST00000457179 DIP2AQ14689 1571 aa16.69■□□□□ 0.26
TOP3B-213ENST00000457179 SLIT1O75093 1534 aa16.69■□□□□ 0.26
TOP3B-213ENST00000457179 RGPD8O14715 1765 aaPredicted RBP16.69■□□□□ 0.26
TOP3B-213ENST00000457179 SBNO1A3KN83 1393 aa16.69■□□□□ 0.26
TOP3B-213ENST00000457179 GNAT3A8MTJ3 354 aa16.69■□□□□ 0.26
TOP3B-213ENST00000457179 FKBP5Q13451 457 aaPredicted RBP16.69■□□□□ 0.26
TOP3B-213ENST00000457179 HAP1P54257 671 aaPredicted RBP16.68■□□□□ 0.26
TOP3B-213ENST00000457179 CHD1LQ86WJ1 897 aa16.68■□□□□ 0.26
TOP3B-213ENST00000457179 DDX49Q9Y6V7 483 aaKnown RBP16.68■□□□□ 0.26
TOP3B-213ENST00000457179 SMAP1Q8IYB5 467 aaPredicted RBP16.68■□□□□ 0.26
TOP3B-213ENST00000457179 IL17REQ8NFR9 667 aa16.68■□□□□ 0.26
TOP3B-213ENST00000457179 GAS2L2Q8NHY3 880 aa16.68■□□□□ 0.26
TOP3B-213ENST00000457179 PPP1R9BQ96SB3 815 aa16.68■□□□□ 0.26
TOP3B-213ENST00000457179 CHL1O00533 1208 aa16.68■□□□□ 0.26
TOP3B-213ENST00000457179 ZBTB7BO15156 539 aaPredicted RBP16.68■□□□□ 0.26
TOP3B-213ENST00000457179 SKOR2Q2VWA4 1001 aaPredicted RBP16.68■□□□□ 0.26
TOP3B-213ENST00000457179 AXIN2Q9Y2T1 843 aa16.68■□□□□ 0.26
TOP3B-213ENST00000457179 NPHP4O75161 1426 aaPredicted RBP16.67■□□□□ 0.26
TOP3B-213ENST00000457179 PTCH1Q13635 1447 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms