RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 NCOA2Q15596 1464 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 DCAF8L1A6NGE4 600 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 NDC80O14777 642 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 SOX12O15370 315 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 KRT18P05783 430 aaKnown RBP4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 AMPD3Q01432 767 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 SAFB2Q14151 953 aaKnown RBP eCLIP4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 USP37Q86T82 979 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC150Q8NCX0 1101 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 TSG101Q99816 390 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC69A6NI79 296 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 NCBP3Q53F19 620 aaKnown RBP4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC12Q8WUD4 166 aaPredicted RBP4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 KIAA1107Q9UPP5 1409 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 MAP3K11Q16584 847 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 SLF2Q8IX21 1173 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 EXOC6Q8TAG9 804 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 NUP62CLQ9H1M0 184 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 APAF1O14727 1248 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 EIF3DO15371 548 aaKnown RBP eCLIP4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 HNRNPMP52272 730 aaKnown RBP eCLIP4.7□□□□□ -1.667e-7■■■■■ 33.1
PPP1R9A-208ENST00000456331 SPA17Q15506 151 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 HS1BP3Q53T59 392 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 U3KPZ7 1027 aaPredicted RBP4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 PAFAH1B1P43034 410 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 WASHC4Q2M389 1173 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC9Q9Y3X0 531 aaKnown RBP4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 MAP2K1Q02750 393 aaPredicted RBP4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 ARHGAP29Q52LW3 1261 aa4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 UPF3BQ9BZI7 483 aaKnown RBP4.7□□□□□ -1.66
PPP1R9A-208ENST00000456331 NOL8Q76FK4 1167 aaKnown RBP4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.69□□□□□ -1.666e-7■■■□□ 16.4
PPP1R9A-208ENST00000456331 TRAK1Q9UPV9 953 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 AMER1Q5JTC6 1135 aaPredicted RBP4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 KLHL34Q8N239 644 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 SFPQP23246 707 aaKnown RBP eCLIP4.69□□□□□ -1.663e-6■■□□□ 11.7
PPP1R9A-208ENST00000456331 CKAP4Q07065 602 aaKnown RBP4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC183Q5T5S1 534 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 FMNL2Q96PY5 1086 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 CTAGE1Q96RT6 745 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 DDX19AQ9NUU7 478 aaKnown RBP4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 POGZQ7Z3K3 1410 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 DYNC1I1O14576 645 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 TUBB2AQ13885 445 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 BLOC1S2Q6QNY1 142 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 TUBB2BQ9BVA1 445 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 TTC14Q96N46 770 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 ALS2CR12Q96Q35 445 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 CNGA1P29973 690 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 PPP1R2P41236 205 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 NEK4P51957 841 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 CLUL1Q15846 466 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 PPP4R3AQ6IN85 833 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 RNF41Q9H4P4 317 aaPredicted RBP4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 AQRO60306 1485 aaKnown RBP eCLIP4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 GRIN2BQ13224 1484 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 PTPN14Q15678 1187 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 SPATA32Q96LK8 384 aa4.69□□□□□ -1.66
PPP1R9A-208ENST00000456331 ESPNB1AK53 854 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 PATL2C9JE40 543 aaKnown RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 WDHD1O75717 1129 aaPredicted RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 RBM25P49756 843 aaKnown RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 CROCCP2Q86T23 111 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 DNAJC2Q99543 621 aaKnown RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 ARHGAP5Q13017 1502 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 FCHSD2O94868 740 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 ATF3P18847 181 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 ATF7IPQ6VMQ6 1270 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 USP25Q9UHP3 1055 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 SPG7Q9UQ90 795 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 PLEKHG5O94827 1062 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 KIF4AO95239 1232 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 NSRP1Q9H0G5 558 aaKnown RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 SOS1Q07889 1333 aaPredicted RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 MVPQ14764 893 aaKnown RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 LARP1BQ659C4 914 aaKnown RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 DDX46Q7L014 1031 aaKnown RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 GLRX3O76003 335 aaKnown RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 BACH2Q9BYV9 841 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 ZSCAN16Q9H4T2 348 aaPredicted RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 FYB1O15117 783 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 HSP90AB3PQ58FF7 597 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 KIAA1328Q86T90 577 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 MPHOSPH6Q99547 160 aaKnown RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 FAM114A2Q9NRY5 505 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 HMG20BQ9P0W2 317 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 ME1P48163 572 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 FOXD4L1Q9NU39 408 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 PODXL2Q9NZ53 605 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 NCAPD3P42695 1498 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 SNAPC4Q5SXM2 1469 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 BMS1Q14692 1282 aaKnown RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 TMEM266Q2M3C6 531 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 RMND1Q9NWS8 449 aa4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 RBM27Q9P2N5 1060 aaKnown RBP4.68□□□□□ -1.66
PPP1R9A-208ENST00000456331 PTPRCP08575 1304 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 MLECQ14165 292 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 TTC39AQ5SRH9 613 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 TRHP20396 242 aaPredicted RBP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 CASQ1P31415 396 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms