RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 ARHGEF10O15013 1369 aa25.16■■□□□ 1.62
CSPG5-203ENST00000456150 KIAA0232Q92628 1395 aa25.16■■□□□ 1.62
CSPG5-203ENST00000456150 C1orf115Q9H7X2 142 aa25.16■■□□□ 1.62
CSPG5-203ENST00000456150 CHL1O00533 1208 aa25.15■■□□□ 1.62
CSPG5-203ENST00000456150 HSP90AB2PQ58FF8 381 aa25.14■■□□□ 1.61
CSPG5-203ENST00000456150 STRCQ7RTU9 1775 aa25.14■■□□□ 1.61
CSPG5-203ENST00000456150 ADGRL3Q9HAR2 1447 aa25.12■■□□□ 1.61
CSPG5-203ENST00000456150 SIRT2Q8IXJ6 389 aa25.12■■□□□ 1.61
CSPG5-203ENST00000456150 STRCP1A6NGW2 1772 aa25.12■■□□□ 1.61
CSPG5-203ENST00000456150 INTS3Q68E01 1043 aaKnown RBP25.11■■□□□ 1.61
CSPG5-203ENST00000456150 SBNO1A3KN83 1393 aa25.11■■□□□ 1.61
CSPG5-203ENST00000456150 FLT4P35916 1363 aa25.11■■□□□ 1.61
CSPG5-203ENST00000456150 RBM25P49756 843 aaKnown RBP25.11■■□□□ 1.61
CSPG5-203ENST00000456150 PROSER2Q86WR7 435 aaPredicted RBP25.11■■□□□ 1.61
CSPG5-203ENST00000456150 C14orf37Q86TY3 774 aa25.1■■□□□ 1.61
CSPG5-203ENST00000456150 MCM10Q7L590 875 aa25.09■■□□□ 1.61
CSPG5-203ENST00000456150 ANKARQ7Z5J8 1434 aa25.09■■□□□ 1.61
CSPG5-203ENST00000456150 MAP3K19Q56UN5 1328 aa25.09■■□□□ 1.61
CSPG5-203ENST00000456150 PTPRCP08575 1304 aa25.08■■□□□ 1.61
CSPG5-203ENST00000456150 CRB1P82279 1406 aa25.08■■□□□ 1.61
CSPG5-203ENST00000456150 HSCBQ8IWL3 235 aa25.08■■□□□ 1.6
CSPG5-203ENST00000456150 NGDNQ8NEJ9 315 aaKnown RBP25.08■■□□□ 1.6
CSPG5-203ENST00000456150 RGS12O14924 1447 aa25.06■■□□□ 1.6
CSPG5-203ENST00000456150 SOX12O15370 315 aa25.06■■□□□ 1.6
CSPG5-203ENST00000456150 PIK3C2AO00443 1686 aa25.06■■□□□ 1.6
CSPG5-203ENST00000456150 KDRP35968 1356 aa25.05■■□□□ 1.6
CSPG5-203ENST00000456150 RTF1Q92541 710 aaKnown RBP25.04■■□□□ 1.6
CSPG5-203ENST00000456150 EIF5BO60841 1220 aaKnown RBP25.03■■□□□ 1.6
CSPG5-203ENST00000456150 KRT24Q2M2I5 525 aa25.03■■□□□ 1.6
CSPG5-203ENST00000456150 DCTPP1Q9H773 170 aa25.03■■□□□ 1.6
CSPG5-203ENST00000456150 SNX21Q969T3 373 aa25.03■■□□□ 1.6
CSPG5-203ENST00000456150 CHMP5Q9NZZ3 219 aa25.03■■□□□ 1.6
CSPG5-203ENST00000456150 AMPHP49418 695 aa25.02■■□□□ 1.6
CSPG5-203ENST00000456150 RPAP2Q8IXW5 612 aaPredicted RBP25.02■■□□□ 1.6
CSPG5-203ENST00000456150 ANKRD44Q8N8A2 993 aa25.01■■□□□ 1.59
CSPG5-203ENST00000456150 GAS2L2Q8NHY3 880 aa25.01■■□□□ 1.59
CSPG5-203ENST00000456150 IGSF1Q8N6C5 1336 aa25.01■■□□□ 1.59
CSPG5-203ENST00000456150 TMEM94Q12767 1356 aa25.01■■□□□ 1.59
CSPG5-203ENST00000456150 ATP10DQ9P241 1426 aa25■■□□□ 1.59
CSPG5-203ENST00000456150 MTHFSDQ2M296 383 aaKnown RBP25■■□□□ 1.59
CSPG5-203ENST00000456150 USP54Q70EL1 1684 aa25■■□□□ 1.59
CSPG5-203ENST00000456150 MSH6P52701 1360 aa24.99■■□□□ 1.59
CSPG5-203ENST00000456150 TBC1D9Q6ZT07 1266 aa24.99■■□□□ 1.59
CSPG5-203ENST00000456150 CDC45O75419 566 aa24.98■■□□□ 1.59
CSPG5-203ENST00000456150 SPRYD3Q8NCJ5 442 aa24.98■■□□□ 1.59
CSPG5-203ENST00000456150 TSPYL4Q9UJ04 414 aa24.98■■□□□ 1.59
CSPG5-203ENST00000456150 PHF8Q9UPP1 1060 aa24.98■■□□□ 1.59
CSPG5-203ENST00000456150 ESCO1Q5FWF5 840 aa24.98■■□□□ 1.59
CSPG5-203ENST00000456150 NCOA3Q9Y6Q9 1424 aa24.98■■□□□ 1.59
CSPG5-203ENST00000456150 HTATSF1O43719 755 aaKnown RBP24.97■■□□□ 1.59
CSPG5-203ENST00000456150 EYA1Q99502 592 aa24.97■■□□□ 1.59
CSPG5-203ENST00000456150 RTL1A6NKG5 1358 aa24.97■■□□□ 1.59
CSPG5-203ENST00000456150 LRRC37A3O60309 1634 aa24.96■■□□□ 1.59
CSPG5-203ENST00000456150 SLC4A2P04920 1241 aa24.96■■□□□ 1.59
CSPG5-203ENST00000456150 CEP85Q6P2H3 762 aa24.96■■□□□ 1.59
CSPG5-203ENST00000456150 PLEKHM2Q8IWE5 1019 aa24.96■■□□□ 1.59
CSPG5-203ENST00000456150 C19orf44Q9H6X5 657 aa24.96■■□□□ 1.59
CSPG5-203ENST00000456150 FOXO3O43524 673 aa24.95■■□□□ 1.59
CSPG5-203ENST00000456150 ORAI2Q96SN7 254 aa24.95■■□□□ 1.59
CSPG5-203ENST00000456150 MARF1Q9Y4F3 1742 aaKnown RBP24.95■■□□□ 1.58
CSPG5-203ENST00000456150 NLRP6P59044 892 aa24.95■■□□□ 1.58
CSPG5-203ENST00000456150 ZNF335Q9H4Z2 1342 aaPredicted RBP24.95■■□□□ 1.58
CSPG5-203ENST00000456150 MCM4P33991 863 aa24.92■■□□□ 1.58
CSPG5-203ENST00000456150 GSPT1P15170 499 aaKnown RBP24.92■■□□□ 1.58
CSPG5-203ENST00000456150 CCT4P50991 539 aaKnown RBP24.92■■□□□ 1.58
CSPG5-203ENST00000456150 TTC22Q5TAA0 569 aa24.92■■□□□ 1.58
CSPG5-203ENST00000456150 MIS18AQ9NYP9 233 aa24.92■■□□□ 1.58
CSPG5-203ENST00000456150 MEIS3Q99687 375 aa24.91■■□□□ 1.58
CSPG5-203ENST00000456150 HMMRO75330 724 aa24.9■■□□□ 1.58
CSPG5-203ENST00000456150 IL27Q8NEV9 243 aa24.9■■□□□ 1.58
CSPG5-203ENST00000456150 HSP90AB1P08238 724 aaKnown RBP24.9■■□□□ 1.58
CSPG5-203ENST00000456150 HOXC9P31274 260 aa24.9■■□□□ 1.58
CSPG5-203ENST00000456150 KIF2CQ99661 725 aa24.9■■□□□ 1.58
CSPG5-203ENST00000456150 CACNA1FO60840 1977 aa24.9■■□□□ 1.58
CSPG5-203ENST00000456150 XIRP1Q702N8 1843 aaKnown RBP24.89■■□□□ 1.58
CSPG5-203ENST00000456150 STK31Q9BXU1 1019 aa24.89■■□□□ 1.58
CSPG5-203ENST00000456150 C1orf167Q5SNV9 1468 aa24.89■■□□□ 1.57
CSPG5-203ENST00000456150 GNAT3A8MTJ3 354 aa24.89■■□□□ 1.57
CSPG5-203ENST00000456150 NUTM2GQ5VZR2 741 aa24.89■■□□□ 1.57
CSPG5-203ENST00000456150 CIZ1Q9ULV3 898 aaPredicted RBP24.89■■□□□ 1.57
CSPG5-203ENST00000456150 FAM208AQ9UK61 1670 aaKnown RBP24.88■■□□□ 1.57
CSPG5-203ENST00000456150 SOS1Q07889 1333 aaPredicted RBP24.88■■□□□ 1.57
CSPG5-203ENST00000456150 DDIT3P35638 169 aa24.88■■□□□ 1.57
CSPG5-203ENST00000456150 ATF3P18847 181 aa24.87■■□□□ 1.57
CSPG5-203ENST00000456150 MST1RQ04912 1400 aa24.86■■□□□ 1.57
CSPG5-203ENST00000456150 BRPF3Q9ULD4 1205 aa24.86■■□□□ 1.57
CSPG5-203ENST00000456150 XPCQ01831 940 aaPredicted RBP24.85■■□□□ 1.57
CSPG5-203ENST00000456150 PSME1Q06323 249 aa24.85■■□□□ 1.57
CSPG5-203ENST00000456150 BABAM1Q9NWV8 329 aa24.85■■□□□ 1.57
CSPG5-203ENST00000456150 MAP3K5Q99683 1374 aa24.85■■□□□ 1.57
CSPG5-203ENST00000456150 CCDC30Q5VVM6 783 aa24.85■■□□□ 1.57
CSPG5-203ENST00000456150 G2E3Q7L622 706 aa24.85■■□□□ 1.57
CSPG5-203ENST00000456150 ABTB2Q8N961 1025 aa24.85■■□□□ 1.57
CSPG5-203ENST00000456150 SLC4A10Q6U841 1118 aa24.84■■□□□ 1.57
CSPG5-203ENST00000456150 DDX11L8A8MPP1 907 aa24.84■■□□□ 1.57
CSPG5-203ENST00000456150 CASC1Q6TDU7 716 aa24.84■■□□□ 1.57
CSPG5-203ENST00000456150 C16orf71Q8IYS4 520 aaPredicted RBP24.84■■□□□ 1.57
CSPG5-203ENST00000456150 K7ELQ4 463 aaPredicted RBP24.83■■□□□ 1.57
CSPG5-203ENST00000456150 L1TD1Q5T7N2 865 aaKnown RBP24.83■■□□□ 1.57
CSPG5-203ENST00000456150 DCCP43146 1447 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms