RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 NCOA3Q9Y6Q9 1424 aa12.68□□□□□ -0.38
RFC3P1-201ENST00000454568 MPHOSPH9Q99550 1183 aa12.67□□□□□ -0.38
RFC3P1-201ENST00000454568 SETBP1Q9Y6X0 1596 aa12.66□□□□□ -0.38
RFC3P1-201ENST00000454568 NEXMIFQ5QGS0 1516 aa12.66□□□□□ -0.38
RFC3P1-201ENST00000454568 RPGRIP1LQ68CZ1 1315 aa12.65□□□□□ -0.38
RFC3P1-201ENST00000454568 ACIN1Q9UKV3 1341 aaKnown RBP12.65□□□□□ -0.38
RFC3P1-201ENST00000454568 PTPRUQ92729 1446 aa12.65□□□□□ -0.38
RFC3P1-201ENST00000454568 RGL3Q3MIN7 710 aa12.65□□□□□ -0.38
RFC3P1-201ENST00000454568 METP08581 1390 aa12.65□□□□□ -0.38
RFC3P1-201ENST00000454568 CCDC144AA2RUR9 1427 aa12.64□□□□□ -0.39
RFC3P1-201ENST00000454568 NRXN3Q9Y4C0 1643 aa12.64□□□□□ -0.39
RFC3P1-201ENST00000454568 DNAJB2P25686 324 aa12.64□□□□□ -0.39
RFC3P1-201ENST00000454568 RBM46Q8TBY0 533 aaKnown RBP12.64□□□□□ -0.39
RFC3P1-201ENST00000454568 ARHGEF1Q92888 912 aaKnown RBP12.64□□□□□ -0.39
RFC3P1-201ENST00000454568 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.64□□□□□ -0.39
RFC3P1-201ENST00000454568 SETD5Q9C0A6 1442 aa12.62□□□□□ -0.39
RFC3P1-201ENST00000454568 PHLPP1O60346 1717 aa12.62□□□□□ -0.39
RFC3P1-201ENST00000454568 KMT5BQ4FZB7 885 aa12.61□□□□□ -0.39
RFC3P1-201ENST00000454568 ZNF787Q6DD87 383 aa12.61□□□□□ -0.39
RFC3P1-201ENST00000454568 XRN1Q8IZH2 1706 aaKnown RBP12.6□□□□□ -0.39
RFC3P1-201ENST00000454568 JCADQ9P266 1359 aa12.59□□□□□ -0.39
RFC3P1-201ENST00000454568 SLC19A1P41440 591 aa12.59□□□□□ -0.39
RFC3P1-201ENST00000454568 PPLO60437 1756 aa12.58□□□□□ -0.39
RFC3P1-201ENST00000454568 PTGDRQ13258 359 aa12.58□□□□□ -0.4
RFC3P1-201ENST00000454568 BLOC1S3Q6QNY0 202 aa12.58□□□□□ -0.4
RFC3P1-201ENST00000454568 TMEM134Q9H6X4 195 aa12.58□□□□□ -0.4
RFC3P1-201ENST00000454568 RAB3GAP2Q9H2M9 1393 aa12.57□□□□□ -0.4
RFC3P1-201ENST00000454568 DCCP43146 1447 aa12.57□□□□□ -0.4
RFC3P1-201ENST00000454568 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
RFC3P1-201ENST00000454568 BRINP3Q76B58 766 aa12.57□□□□□ -0.4
RFC3P1-201ENST00000454568 ADGRF5Q8IZF2 1346 aa12.57□□□□□ -0.4
RFC3P1-201ENST00000454568 ADGRL3Q9HAR2 1447 aa12.56□□□□□ -0.4
RFC3P1-201ENST00000454568 MEX3CQ5U5Q3 659 aaKnown RBP12.56□□□□□ -0.4
RFC3P1-201ENST00000454568 STK26Q9P289 416 aa12.56□□□□□ -0.4
RFC3P1-201ENST00000454568 ANKRD30BQ9BXX2 1392 aa12.56□□□□□ -0.4
RFC3P1-201ENST00000454568 ACTN4O43707 911 aaKnown RBP12.55□□□□□ -0.4
RFC3P1-201ENST00000454568 ANKLE1Q8NAG6 615 aa12.55□□□□□ -0.4
RFC3P1-201ENST00000454568 MST1RQ04912 1400 aa12.54□□□□□ -0.4
RFC3P1-201ENST00000454568 MLLT3P42568 568 aaPredicted RBP12.54□□□□□ -0.4
RFC3P1-201ENST00000454568 RGS17Q9UGC6 210 aaPredicted RBP12.54□□□□□ -0.4
RFC3P1-201ENST00000454568 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
RFC3P1-201ENST00000454568 ROBO2Q9HCK4 1378 aa12.54□□□□□ -0.4
RFC3P1-201ENST00000454568 SETD1AO15047 1707 aaKnown RBP12.54□□□□□ -0.4
RFC3P1-201ENST00000454568 NALCNQ8IZF0 1738 aa12.54□□□□□ -0.4
RFC3P1-201ENST00000454568 SPATA31E1Q6ZUB1 1445 aa12.54□□□□□ -0.4
RFC3P1-201ENST00000454568 AHDC1Q5TGY3 1603 aaPredicted RBP12.53□□□□□ -0.4
RFC3P1-201ENST00000454568 NUTM2BA6NNL0 878 aaPredicted RBP12.53□□□□□ -0.4
RFC3P1-201ENST00000454568 NUTM2EB1AL46 878 aaPredicted RBP12.53□□□□□ -0.4
RFC3P1-201ENST00000454568 PKDCCQ504Y2 493 aa12.53□□□□□ -0.4
RFC3P1-201ENST00000454568 TMEM132EQ6IEE7 984 aa12.53□□□□□ -0.4
RFC3P1-201ENST00000454568 NUTM2AQ8IVF1 878 aaPredicted RBP12.53□□□□□ -0.4
RFC3P1-201ENST00000454568 ADGRG1Q9Y653 693 aa12.53□□□□□ -0.4
RFC3P1-201ENST00000454568 SPATA31A6Q5VVP1 1343 aa12.53□□□□□ -0.4
RFC3P1-201ENST00000454568 PTCH1Q13635 1447 aa12.53□□□□□ -0.4
RFC3P1-201ENST00000454568 SPRYD7Q5W111 196 aa12.52□□□□□ -0.41
RFC3P1-201ENST00000454568 ZNF598Q86UK7 904 aaKnown RBP12.52□□□□□ -0.41
RFC3P1-201ENST00000454568 LRRC59Q96AG4 307 aaKnown RBP12.52□□□□□ -0.41
RFC3P1-201ENST00000454568 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.41
RFC3P1-201ENST00000454568 DGAT1O75907 488 aa12.51□□□□□ -0.41
RFC3P1-201ENST00000454568 PRR20EP86478 221 aa12.51□□□□□ -0.41
RFC3P1-201ENST00000454568 PRR20CP86479 221 aa12.51□□□□□ -0.41
RFC3P1-201ENST00000454568 PRR20DP86480 221 aa12.51□□□□□ -0.41
RFC3P1-201ENST00000454568 PRR20BP86481 221 aa12.51□□□□□ -0.41
RFC3P1-201ENST00000454568 PRR20AP86496 221 aa12.51□□□□□ -0.41
RFC3P1-201ENST00000454568 DDX17Q92841 729 aaKnown RBP12.51□□□□□ -0.41
RFC3P1-201ENST00000454568 IFT172Q9UG01 1749 aa12.51□□□□□ -0.41
RFC3P1-201ENST00000454568 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
RFC3P1-201ENST00000454568 NR1I2O75469 434 aa12.5□□□□□ -0.41
RFC3P1-201ENST00000454568 CFHP08603 1231 aa12.5□□□□□ -0.41
RFC3P1-201ENST00000454568 POTEAQ6S8J7 498 aa12.5□□□□□ -0.41
RFC3P1-201ENST00000454568 WAPLQ7Z5K2 1190 aa12.5□□□□□ -0.41
RFC3P1-201ENST00000454568 C1orf167Q5SNV9 1468 aa12.49□□□□□ -0.41
RFC3P1-201ENST00000454568 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.49□□□□□ -0.41
RFC3P1-201ENST00000454568 NUTM2FA1L443 756 aa12.49□□□□□ -0.41
RFC3P1-201ENST00000454568 ORAI2Q96SN7 254 aa12.49□□□□□ -0.41
RFC3P1-201ENST00000454568 SHPRHQ149N8 1683 aa12.48□□□□□ -0.41
RFC3P1-201ENST00000454568 LRPPRCP42704 1394 aaKnown RBP12.48□□□□□ -0.41
RFC3P1-201ENST00000454568 TLL1O43897 1013 aa12.48□□□□□ -0.41
RFC3P1-201ENST00000454568 ESCO1Q5FWF5 840 aa12.48□□□□□ -0.41
RFC3P1-201ENST00000454568 CFAP70Q5T0N1 1121 aa12.48□□□□□ -0.41
RFC3P1-201ENST00000454568 TRIM67Q6ZTA4 783 aa12.48□□□□□ -0.41
RFC3P1-201ENST00000454568 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
RFC3P1-201ENST00000454568 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
RFC3P1-201ENST00000454568 NHSL1Q5SYE7 1610 aa12.48□□□□□ -0.41
RFC3P1-201ENST00000454568 PIK3C2GO75747 1445 aa12.47□□□□□ -0.41
RFC3P1-201ENST00000454568 DHX57Q6P158 1386 aaKnown RBP12.47□□□□□ -0.41
RFC3P1-201ENST00000454568 FCHSD2O94868 740 aa12.47□□□□□ -0.41
RFC3P1-201ENST00000454568 S1PR4O95977 384 aa12.47□□□□□ -0.41
RFC3P1-201ENST00000454568 HRCP23327 699 aa12.47□□□□□ -0.41
RFC3P1-201ENST00000454568 ZNF772Q68DY9 489 aaPredicted RBP12.47□□□□□ -0.41
RFC3P1-201ENST00000454568 C14orf93Q9H972 538 aaKnown RBP12.47□□□□□ -0.41
RFC3P1-201ENST00000454568 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
RFC3P1-201ENST00000454568 PRAG1Q86YV5 1406 aa12.46□□□□□ -0.41
RFC3P1-201ENST00000454568 ABCC11Q96J66 1382 aa12.46□□□□□ -0.41
RFC3P1-201ENST00000454568 ADH1BP00325 375 aa12.46□□□□□ -0.41
RFC3P1-201ENST00000454568 LRP6O75581 1613 aa12.46□□□□□ -0.41
RFC3P1-201ENST00000454568 YTHDC2Q9H6S0 1430 aaKnown RBP12.45□□□□□ -0.42
RFC3P1-201ENST00000454568 OATP04181 439 aa12.45□□□□□ -0.42
RFC3P1-201ENST00000454568 ZNF697Q5TEC3 545 aa12.45□□□□□ -0.42
RFC3P1-201ENST00000454568 DCAF11Q8TEB1 546 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms