RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 FBLN1P23142 703 aa30.87■■■□□ 2.53
HMG20B-206ENST00000453933 YBX3P16989 372 aaKnown RBP eCLIP30.86■■■□□ 2.53
HMG20B-206ENST00000453933 ZCRB1Q8TBF4 217 aaKnown RBP30.86■■■□□ 2.53
HMG20B-206ENST00000453933 GOLGB1Q14789 3259 aaKnown RBP30.85■■■□□ 2.53
HMG20B-206ENST00000453933 MAP3K19Q56UN5 1328 aa30.85■■■□□ 2.53
HMG20B-206ENST00000453933 CCNL1Q9UK58 526 aaPredicted RBP30.85■■■□□ 2.53
HMG20B-206ENST00000453933 HOXC9P31274 260 aa30.84■■■□□ 2.53
HMG20B-206ENST00000453933 COL23A1Q86Y22 540 aaPredicted RBP30.84■■■□□ 2.53
HMG20B-206ENST00000453933 MSH5O43196 834 aa30.83■■■□□ 2.53
HMG20B-206ENST00000453933 PUS7Q96PZ0 661 aaKnown RBP30.83■■■□□ 2.53
HMG20B-206ENST00000453933 GRIN3BO60391 1043 aa30.81■■■□□ 2.52
HMG20B-206ENST00000453933 AMPHP49418 695 aa30.81■■■□□ 2.52
HMG20B-206ENST00000453933 COG3Q96JB2 828 aa30.81■■■□□ 2.52
HMG20B-206ENST00000453933 TUBGCP6Q96RT7 1819 aa30.8■■■□□ 2.52
HMG20B-206ENST00000453933 MEGF6O75095 1541 aa30.79■■■□□ 2.52
HMG20B-206ENST00000453933 SHANK3Q9BYB0 1731 aa30.79■■■□□ 2.52
HMG20B-206ENST00000453933 FAM208AQ9UK61 1670 aaKnown RBP30.78■■■□□ 2.52
HMG20B-206ENST00000453933 MSL1Q68DK7 614 aa30.78■■■□□ 2.52
HMG20B-206ENST00000453933 LY75O60449 1722 aa30.78■■■□□ 2.52
HMG20B-206ENST00000453933 DOT1LQ8TEK3 1739 aa30.78■■■□□ 2.52
HMG20B-206ENST00000453933 NBPF6Q5VWK0 638 aa30.76■■■□□ 2.51
HMG20B-206ENST00000453933 NBPF4Q96M43 638 aa30.76■■■□□ 2.51
HMG20B-206ENST00000453933 USP47Q96K76 1375 aa30.76■■■□□ 2.51
HMG20B-206ENST00000453933 IFFO2Q5TF58 517 aa30.73■■■□□ 2.51
HMG20B-206ENST00000453933 USHBP1Q8N6Y0 703 aa30.73■■■□□ 2.51
HMG20B-206ENST00000453933 RRS1Q15050 365 aaKnown RBP30.71■■■□□ 2.51
HMG20B-206ENST00000453933 TESK2Q96S53 571 aa30.71■■■□□ 2.51
HMG20B-206ENST00000453933 RGPD2P0DJD1 1756 aa30.69■■■□□ 2.5
HMG20B-206ENST00000453933 CD2APQ9Y5K6 639 aa30.69■■■□□ 2.5
HMG20B-206ENST00000453933 ATP10DQ9P241 1426 aa30.68■■■□□ 2.5
HMG20B-206ENST00000453933 CGNL1Q0VF96 1302 aa30.68■■■□□ 2.5
HMG20B-206ENST00000453933 CEP350Q5VT06 3117 aa30.67■■■□□ 2.5
HMG20B-206ENST00000453933 RAPGEF4Q8WZA2 1011 aa30.67■■■□□ 2.5
HMG20B-206ENST00000453933 ST20-MTHFSA0A0A6YYL1 179 aa30.66■■■□□ 2.5
HMG20B-206ENST00000453933 RTL1A6NKG5 1358 aa30.66■■■□□ 2.5
HMG20B-206ENST00000453933 TATP17735 454 aaPredicted RBP30.64■■■□□ 2.5
HMG20B-206ENST00000453933 FLAD1Q8NFF5 587 aa30.64■■■□□ 2.5
HMG20B-206ENST00000453933 GGNBP2Q9H3C7 697 aa30.64■■■□□ 2.5
HMG20B-206ENST00000453933 FYB1O15117 783 aa30.63■■■□□ 2.49
HMG20B-206ENST00000453933 MPRIPQ6WCQ1 1025 aa30.62■■■□□ 2.49
HMG20B-206ENST00000453933 PALLDQ8WX93 1383 aa30.62■■■□□ 2.49
HMG20B-206ENST00000453933 TONSLQ96HA7 1378 aa30.62■■■□□ 2.49
HMG20B-206ENST00000453933 GPBP1L1Q9HC44 474 aaPredicted RBP30.61■■■□□ 2.49
HMG20B-206ENST00000453933 HSP90AB2PQ58FF8 381 aa30.6■■■□□ 2.49
HMG20B-206ENST00000453933 AMIGO3Q86WK7 504 aa30.6■■■□□ 2.49
HMG20B-206ENST00000453933 PCDH11XQ9BZA7 1347 aa30.59■■■□□ 2.49
HMG20B-206ENST00000453933 PCDH11YQ9BZA8 1340 aa30.59■■■□□ 2.49
HMG20B-206ENST00000453933 HMGB2P26583 209 aaKnown RBP30.58■■■□□ 2.49
HMG20B-206ENST00000453933 SMG6Q86US8 1419 aaKnown RBP30.57■■■□□ 2.48
HMG20B-206ENST00000453933 CYP27B1O15528 508 aa30.57■■■□□ 2.48
HMG20B-206ENST00000453933 SMIM5Q71RC9 77 aa30.57■■■□□ 2.48
HMG20B-206ENST00000453933 ZNF526Q8TF50 670 aaPredicted RBP30.57■■■□□ 2.48
HMG20B-206ENST00000453933 C5P01031 1676 aa30.57■■■□□ 2.48
HMG20B-206ENST00000453933 ADCY9O60503 1353 aa30.55■■■□□ 2.48
HMG20B-206ENST00000453933 SLC24A1O60721 1099 aa30.55■■■□□ 2.48
HMG20B-206ENST00000453933 INSRP06213 1382 aa30.54■■■□□ 2.48
HMG20B-206ENST00000453933 AK7Q96M32 723 aa30.54■■■□□ 2.48
HMG20B-206ENST00000453933 WWC3Q9ULE0 1092 aa30.54■■■□□ 2.48
HMG20B-206ENST00000453933 SMARCC1Q92922 1105 aaPredicted RBP30.53■■■□□ 2.48
HMG20B-206ENST00000453933 PHF14O94880 888 aa30.52■■■□□ 2.48
HMG20B-206ENST00000453933 IGSF1Q8N6C5 1336 aa30.51■■■□□ 2.48
HMG20B-206ENST00000453933 HSPA6P17066 643 aa30.51■■■□□ 2.47
HMG20B-206ENST00000453933 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.5■■■□□ 2.47
HMG20B-206ENST00000453933 PIGBQ92521 554 aa30.5■■■□□ 2.47
HMG20B-206ENST00000453933 C4BP0C0L5 1744 aa30.48■■■□□ 2.47
HMG20B-206ENST00000453933 FLT4P35916 1363 aa30.48■■■□□ 2.47
HMG20B-206ENST00000453933 TAF1LQ8IZX4 1826 aa30.47■■■□□ 2.47
HMG20B-206ENST00000453933 LINC00116Q8NCU8 138 aa30.45■■■□□ 2.47
HMG20B-206ENST00000453933 KIF24Q5T7B8 1368 aa30.44■■■□□ 2.46
HMG20B-206ENST00000453933 TMF1P82094 1093 aa30.44■■■□□ 2.46
HMG20B-206ENST00000453933 NKX1-1Q15270 411 aaPredicted RBP30.44■■■□□ 2.46
HMG20B-206ENST00000453933 TOGARAM1Q9Y4F4 1720 aa30.44■■■□□ 2.46
HMG20B-206ENST00000453933 LOC102724428A0A0B4J2F2 783 aa30.43■■■□□ 2.46
HMG20B-206ENST00000453933 SSFA2P28290 1259 aa30.43■■■□□ 2.46
HMG20B-206ENST00000453933 SIK1P57059 783 aa30.43■■■□□ 2.46
HMG20B-206ENST00000453933 EMILIN1Q9Y6C2 1016 aa30.43■■■□□ 2.46
HMG20B-206ENST00000453933 NSD3Q9BZ95 1437 aa30.4■■■□□ 2.46
HMG20B-206ENST00000453933 KIF3CO14782 793 aa30.4■■■□□ 2.46
HMG20B-206ENST00000453933 ITPK1Q13572 414 aa30.39■■■□□ 2.46
HMG20B-206ENST00000453933 SPG7Q9UQ90 795 aa30.39■■■□□ 2.46
HMG20B-206ENST00000453933 ITGB4P16144 1822 aa30.38■■■□□ 2.45
HMG20B-206ENST00000453933 UBR3Q6ZT12 1888 aa30.38■■■□□ 2.45
HMG20B-206ENST00000453933 CARD14Q9BXL6 1004 aa30.38■■■□□ 2.45
HMG20B-206ENST00000453933 ASAP1Q9ULH1 1129 aa30.38■■■□□ 2.45
HMG20B-206ENST00000453933 GNPATO15228 680 aa30.36■■■□□ 2.45
HMG20B-206ENST00000453933 PPM1GO15355 546 aaPredicted RBP30.36■■■□□ 2.45
HMG20B-206ENST00000453933 TMOD3Q9NYL9 352 aa30.36■■■□□ 2.45
HMG20B-206ENST00000453933 NCAPD2Q15021 1401 aa30.35■■■□□ 2.45
HMG20B-206ENST00000453933 PKD1L3Q7Z443 1732 aa30.34■■■□□ 2.45
HMG20B-206ENST00000453933 ATP6V1AP38606 617 aa30.34■■■□□ 2.45
HMG20B-206ENST00000453933 MAP2P11137 1827 aaKnown RBP30.33■■■□□ 2.45
HMG20B-206ENST00000453933 MMP10P09238 476 aa30.33■■■□□ 2.45
HMG20B-206ENST00000453933 EYA1Q99502 592 aa30.33■■■□□ 2.45
HMG20B-206ENST00000453933 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.32■■■□□ 2.44
HMG20B-206ENST00000453933 ATG3Q9NT62 314 aa30.31■■■□□ 2.44
HMG20B-206ENST00000453933 KIF20BQ96Q89 1820 aa30.29■■■□□ 2.44
HMG20B-206ENST00000453933 WASHC2AQ641Q2 1341 aa30.29■■■□□ 2.44
HMG20B-206ENST00000453933 PHKG2P15735 406 aa30.29■■■□□ 2.44
HMG20B-206ENST00000453933 CDCA8Q53HL2 280 aa30.29■■■□□ 2.44
HMG20B-206ENST00000453933 IFNL2Q8IZJ0 200 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms