RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 SPAG9O60271 1321 aaKnown RBP22.41■■□□□ 1.18
PTPA-223ENST00000452489 REREQ9P2R6 1566 aa22.41■■□□□ 1.18
PTPA-223ENST00000452489 ZNF592Q92610 1267 aa22.41■■□□□ 1.18
PTPA-223ENST00000452489 FUCA2Q9BTY2 467 aa22.41■■□□□ 1.18
PTPA-223ENST00000452489 CD109Q6YHK3 1445 aa22.41■■□□□ 1.18
PTPA-223ENST00000452489 SDSP20132 328 aa22.4■■□□□ 1.18
PTPA-223ENST00000452489 RTF1Q92541 710 aaKnown RBP22.4■■□□□ 1.18
PTPA-223ENST00000452489 CNPY2Q9Y2B0 182 aa22.4■■□□□ 1.18
PTPA-223ENST00000452489 SRPK2P78362 688 aaKnown RBP22.4■■□□□ 1.18
PTPA-223ENST00000452489 CFAP53Q96M91 514 aa22.4■■□□□ 1.18
PTPA-223ENST00000452489 NOL10Q9BSC4 688 aaKnown RBP22.4■■□□□ 1.18
PTPA-223ENST00000452489 PAXBP1Q9Y5B6 917 aa22.39■■□□□ 1.18
PTPA-223ENST00000452489 TNNT3P45378 269 aaPredicted RBP22.39■■□□□ 1.17
PTPA-223ENST00000452489 CCDC186Q7Z3E2 898 aa22.39■■□□□ 1.17
PTPA-223ENST00000452489 RSPH14Q9UHP6 348 aa22.39■■□□□ 1.17
PTPA-223ENST00000452489 ZNF215Q9UL58 517 aaPredicted RBP22.39■■□□□ 1.17
PTPA-223ENST00000452489 PPRC1Q5VV67 1664 aaKnown RBP22.39■■□□□ 1.17
PTPA-223ENST00000452489 CUL4AQ13619 759 aa22.38■■□□□ 1.17
PTPA-223ENST00000452489 ADGRB2O60241 1585 aa22.38■■□□□ 1.17
PTPA-223ENST00000452489 CFAP44Q96MT7 982 aa22.38■■□□□ 1.17
PTPA-223ENST00000452489 TMPOP42166 694 aaKnown RBP22.37■■□□□ 1.17
PTPA-223ENST00000452489 MLECQ14165 292 aa22.37■■□□□ 1.17
PTPA-223ENST00000452489 TMX1Q9H3N1 280 aa22.37■■□□□ 1.17
PTPA-223ENST00000452489 ZNF446Q9NWS9 450 aa22.37■■□□□ 1.17
PTPA-223ENST00000452489 TTC37Q6PGP7 1564 aa22.37■■□□□ 1.17
PTPA-223ENST00000452489 ELF2Q15723 593 aa22.37■■□□□ 1.17
PTPA-223ENST00000452489 NCBP3Q53F19 620 aaKnown RBP22.37■■□□□ 1.17
PTPA-223ENST00000452489 NRBP1Q9UHY1 535 aa22.37■■□□□ 1.17
PTPA-223ENST00000452489 SOX12O15370 315 aa22.36■■□□□ 1.17
PTPA-223ENST00000452489 KIF1BPQ96EK5 621 aa22.36■■□□□ 1.17
PTPA-223ENST00000452489 UNC13BO14795 1591 aa22.36■■□□□ 1.17
PTPA-223ENST00000452489 SRCIN1Q9C0H9 1055 aa22.36■■□□□ 1.17
PTPA-223ENST00000452489 REC8O95072 547 aa22.35■■□□□ 1.17
PTPA-223ENST00000452489 CASC1Q6TDU7 716 aa22.35■■□□□ 1.17
PTPA-223ENST00000452489 GTF3C6Q969F1 213 aa22.35■■□□□ 1.17
PTPA-223ENST00000452489 TCHHQ07283 1943 aa22.35■■□□□ 1.17
PTPA-223ENST00000452489 TPD52L1Q16890 204 aaPredicted RBP22.35■■□□□ 1.17
PTPA-223ENST00000452489 KLHL34Q8N239 644 aa22.35■■□□□ 1.17
PTPA-223ENST00000452489 EFCC1Q9HA90 598 aa22.35■■□□□ 1.17
PTPA-223ENST00000452489 ATAD2Q6PL18 1390 aa22.35■■□□□ 1.17
PTPA-223ENST00000452489 NFATC2IPQ8NCF5 419 aa22.34■■□□□ 1.17
PTPA-223ENST00000452489 ATP10AO60312 1499 aa22.34■■□□□ 1.17
PTPA-223ENST00000452489 FAM193AP78312 1265 aa22.34■■□□□ 1.17
PTPA-223ENST00000452489 TMEM87AQ8NBN3 555 aa22.34■■□□□ 1.17
PTPA-223ENST00000452489 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.34■■□□□ 1.17
PTPA-223ENST00000452489 ALDH1L2Q3SY69 923 aa22.33■■□□□ 1.17
PTPA-223ENST00000452489 CEP135Q66GS9 1140 aa22.33■■□□□ 1.17
PTPA-223ENST00000452489 NPHP1O15259 732 aa22.32■■□□□ 1.16
PTPA-223ENST00000452489 CREBRFQ8IUR6 639 aa22.32■■□□□ 1.16
PTPA-223ENST00000452489 NEK11Q8NG66 645 aa22.32■■□□□ 1.16
PTPA-223ENST00000452489 ADAMTS12P58397 1594 aa22.32■■□□□ 1.16
PTPA-223ENST00000452489 WDR33Q9C0J8 1336 aaKnown RBP22.32■■□□□ 1.16
PTPA-223ENST00000452489 ERC2O15083 957 aa22.32■■□□□ 1.16
PTPA-223ENST00000452489 ARHGEF5Q12774 1597 aa22.32■■□□□ 1.16
PTPA-223ENST00000452489 INTS4Q96HW7 963 aaKnown RBP22.32■■□□□ 1.16
PTPA-223ENST00000452489 SLC12A5Q9H2X9 1139 aa22.32■■□□□ 1.16
PTPA-223ENST00000452489 ADGRL1O94910 1474 aa22.32■■□□□ 1.16
PTPA-223ENST00000452489 RPAP1Q9BWH6 1393 aaPredicted RBP22.32■■□□□ 1.16
PTPA-223ENST00000452489 NOP2P46087 812 aaKnown RBP22.31■■□□□ 1.16
PTPA-223ENST00000452489 UBE2HP62256 183 aa22.31■■□□□ 1.16
PTPA-223ENST00000452489 ZSCAN25Q6NSZ9 544 aa22.31■■□□□ 1.16
PTPA-223ENST00000452489 PLEKHF1Q96S99 279 aa22.31■■□□□ 1.16
PTPA-223ENST00000452489 YY1AP1Q9H869 796 aa22.31■■□□□ 1.16
PTPA-223ENST00000452489 APBB1O00213 710 aa22.31■■□□□ 1.16
PTPA-223ENST00000452489 DRC7Q8IY82 874 aa22.31■■□□□ 1.16
PTPA-223ENST00000452489 ERCC6Q03468 1493 aa22.31■■□□□ 1.16
PTPA-223ENST00000452489 IQGAP3Q86VI3 1631 aa22.31■■□□□ 1.16
PTPA-223ENST00000452489 YEATS2Q9ULM3 1422 aa22.31■■□□□ 1.16
PTPA-223ENST00000452489 UHRF1BP1LA0JNW5 1464 aa22.3■■□□□ 1.16
PTPA-223ENST00000452489 FIBPO43427 364 aa22.3■■□□□ 1.16
PTPA-223ENST00000452489 PALD1Q9ULE6 856 aa22.3■■□□□ 1.16
PTPA-223ENST00000452489 ERBB3P21860 1342 aa22.3■■□□□ 1.16
PTPA-223ENST00000452489 RASSF4Q9H2L5 321 aa22.3■■□□□ 1.16
PTPA-223ENST00000452489 GEMIN8Q9NWZ8 242 aaKnown RBP22.3■■□□□ 1.16
PTPA-223ENST00000452489 MCM2P49736 904 aa22.29■■□□□ 1.16
PTPA-223ENST00000452489 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.29■■□□□ 1.16
PTPA-223ENST00000452489 LOC102724159A0A0B4J2E5 919 aa22.29■■□□□ 1.16
PTPA-223ENST00000452489 GYS2P54840 703 aa22.29■■□□□ 1.16
PTPA-223ENST00000452489 PWP2Q15269 919 aaKnown RBP22.29■■□□□ 1.16
PTPA-223ENST00000452489 SYT10Q6XYQ8 523 aa22.29■■□□□ 1.16
PTPA-223ENST00000452489 LUZP1Q86V48 1076 aa22.29■■□□□ 1.16
PTPA-223ENST00000452489 SLC52A1Q9NWF4 448 aa22.29■■□□□ 1.16
PTPA-223ENST00000452489 PLEKHD1A6NEE1 506 aa22.28■■□□□ 1.16
PTPA-223ENST00000452489 TRIM66O15016 1216 aa22.28■■□□□ 1.16
PTPA-223ENST00000452489 DCTPP1Q9H773 170 aa22.28■■□□□ 1.16
PTPA-223ENST00000452489 RNF216Q9NWF9 866 aaPredicted RBP22.28■■□□□ 1.16
PTPA-223ENST00000452489 USP27XA6NNY8 438 aa22.28■■□□□ 1.16
PTPA-223ENST00000452489 DHX16O60231 1041 aaKnown RBP22.28■■□□□ 1.16
PTPA-223ENST00000452489 DUOX2Q9NRD8 1548 aa22.28■■□□□ 1.16
PTPA-223ENST00000452489 IFT140Q96RY7 1462 aa22.27■■□□□ 1.16
PTPA-223ENST00000452489 CFAP70Q5T0N1 1121 aa22.27■■□□□ 1.16
PTPA-223ENST00000452489 PTPRTO14522 1441 aa22.27■■□□□ 1.16
PTPA-223ENST00000452489 IL16Q14005 1332 aa22.27■■□□□ 1.16
PTPA-223ENST00000452489 CACTINQ8WUQ7 758 aaKnown RBP22.27■■□□□ 1.16
PTPA-223ENST00000452489 C10orf67Q8IYJ2 551 aa22.26■■□□□ 1.15
PTPA-223ENST00000452489 UPF3BQ9BZI7 483 aaKnown RBP22.26■■□□□ 1.15
PTPA-223ENST00000452489 LCMT1Q9UIC8 334 aa22.26■■□□□ 1.15
PTPA-223ENST00000452489 FHOD1Q9Y613 1164 aa22.26■■□□□ 1.15
PTPA-223ENST00000452489 PIK3R4Q99570 1358 aa22.25■■□□□ 1.15
PTPA-223ENST00000452489 SLFNL1Q499Z3 407 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms