RNA–Protein interactions for RNA: ENST00000451107.3

FGD6-202, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best)

Gene FGD6, Length 2,232 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-202ENST00000451107 KRT28Q7Z3Y7 464 aa27.34■■□□□ 1.97
FGD6-202ENST00000451107 ELL2O00472 640 aaPredicted RBP27.33■■□□□ 1.97
FGD6-202ENST00000451107 LTV1Q96GA3 475 aaPredicted RBP27.33■■□□□ 1.97
FGD6-202ENST00000451107 USP19O94966 1318 aa27.32■■□□□ 1.96
FGD6-202ENST00000451107 MSH5O43196 834 aa27.32■■□□□ 1.96
FGD6-202ENST00000451107 LRRC37A3O60309 1634 aa27.32■■□□□ 1.96
FGD6-202ENST00000451107 GCP02774 474 aa27.31■■□□□ 1.96
FGD6-202ENST00000451107 XPCQ01831 940 aaPredicted RBP27.31■■□□□ 1.96
FGD6-202ENST00000451107 CHMP4BQ9H444 224 aaKnown RBP27.31■■□□□ 1.96
FGD6-202ENST00000451107 GNAT3A8MTJ3 354 aa27.29■■□□□ 1.96
FGD6-202ENST00000451107 ANP32AP39687 249 aaKnown RBP27.29■■□□□ 1.96
FGD6-202ENST00000451107 HSPA2P54652 639 aa27.28■■□□□ 1.96
FGD6-202ENST00000451107 API5Q9BZZ5 524 aaKnown RBP27.28■■□□□ 1.96
FGD6-202ENST00000451107 ALS2Q96Q42 1657 aa27.28■■□□□ 1.96
FGD6-202ENST00000451107 RGS3P49796 1198 aa27.28■■□□□ 1.96
FGD6-202ENST00000451107 ARHGEF25Q86VW2 580 aa27.28■■□□□ 1.96
FGD6-202ENST00000451107 MAP3K5Q99683 1374 aa27.27■■□□□ 1.96
FGD6-202ENST00000451107 CADPS2Q86UW7 1296 aa27.27■■□□□ 1.96
FGD6-202ENST00000451107 ZBTB40Q9NUA8 1239 aa27.27■■□□□ 1.96
FGD6-202ENST00000451107 HDAC1Q13547 482 aaPredicted RBP27.26■■□□□ 1.96
FGD6-202ENST00000451107 ABCC4O15439 1325 aa27.26■■□□□ 1.95
FGD6-202ENST00000451107 LMOD2Q6P5Q4 547 aa27.25■■□□□ 1.95
FGD6-202ENST00000451107 MSH6P52701 1360 aa27.25■■□□□ 1.95
FGD6-202ENST00000451107 FAM161AQ3B820 660 aa27.25■■□□□ 1.95
FGD6-202ENST00000451107 TSPYL4Q9UJ04 414 aa27.25■■□□□ 1.95
FGD6-202ENST00000451107 LMTK3Q96Q04 1460 aa27.23■■□□□ 1.95
FGD6-202ENST00000451107 ZBTB7CA1YPR0 619 aa27.23■■□□□ 1.95
FGD6-202ENST00000451107 NBPF6Q5VWK0 638 aa27.22■■□□□ 1.95
FGD6-202ENST00000451107 NBPF4Q96M43 638 aa27.22■■□□□ 1.95
FGD6-202ENST00000451107 BABAM1Q9NWV8 329 aa27.22■■□□□ 1.95
FGD6-202ENST00000451107 USHBP1Q8N6Y0 703 aa27.22■■□□□ 1.95
FGD6-202ENST00000451107 NCAPD2Q15021 1401 aa27.21■■□□□ 1.95
FGD6-202ENST00000451107 KRT24Q2M2I5 525 aa27.2■■□□□ 1.95
FGD6-202ENST00000451107 NPHP3Q7Z494 1330 aa27.19■■□□□ 1.94
FGD6-202ENST00000451107 CAMTA1Q9Y6Y1 1673 aa27.19■■□□□ 1.94
FGD6-202ENST00000451107 RGPD2P0DJD1 1756 aa27.19■■□□□ 1.94
FGD6-202ENST00000451107 STRCQ7RTU9 1775 aa27.19■■□□□ 1.94
FGD6-202ENST00000451107 KDM4FA0A1W2PPD8 638 aa27.18■■□□□ 1.94
FGD6-202ENST00000451107 PDZRN3Q9UPQ7 1066 aa27.18■■□□□ 1.94
FGD6-202ENST00000451107 ZBTB7BO15156 539 aaPredicted RBP27.18■■□□□ 1.94
FGD6-202ENST00000451107 MED1Q15648 1581 aaPredicted RBP27.17■■□□□ 1.94
FGD6-202ENST00000451107 PTPRCP08575 1304 aa27.17■■□□□ 1.94
FGD6-202ENST00000451107 C8orf34Q49A92 452 aa27.17■■□□□ 1.94
FGD6-202ENST00000451107 MIS18AQ9NYP9 233 aa27.17■■□□□ 1.94
FGD6-202ENST00000451107 SOS1Q07889 1333 aaPredicted RBP27.17■■□□□ 1.94
FGD6-202ENST00000451107 ANP32EQ9BTT0 268 aa27.17■■□□□ 1.94
FGD6-202ENST00000451107 XIRP1Q702N8 1843 aaKnown RBP27.16■■□□□ 1.94
FGD6-202ENST00000451107 IL17REQ8NFR9 667 aa27.16■■□□□ 1.94
FGD6-202ENST00000451107 ANKRD24Q8TF21 1146 aa27.16■■□□□ 1.94
FGD6-202ENST00000451107 IPO9Q96P70 1041 aaKnown RBP27.14■■□□□ 1.94
FGD6-202ENST00000451107 TAF7Q15545 349 aaPredicted RBP27.14■■□□□ 1.94
FGD6-202ENST00000451107 LRRC59Q96AG4 307 aaKnown RBP27.14■■□□□ 1.94
FGD6-202ENST00000451107 LMO7Q8WWI1 1683 aa27.14■■□□□ 1.93
FGD6-202ENST00000451107 VIRMAQ69YN4 1812 aaKnown RBP27.14■■□□□ 1.93
FGD6-202ENST00000451107 AMOTQ4VCS5 1084 aa27.13■■□□□ 1.93
FGD6-202ENST00000451107 TNS3Q68CZ2 1445 aa27.13■■□□□ 1.93
FGD6-202ENST00000451107 CEMIPQ8WUJ3 1361 aa27.13■■□□□ 1.93
FGD6-202ENST00000451107 PLEKHO1Q53GL0 409 aaPredicted RBP27.13■■□□□ 1.93
FGD6-202ENST00000451107 SMC5Q8IY18 1101 aa27.13■■□□□ 1.93
FGD6-202ENST00000451107 RGS12O14924 1447 aa27.12■■□□□ 1.93
FGD6-202ENST00000451107 INTS3Q68E01 1043 aaKnown RBP27.12■■□□□ 1.93
FGD6-202ENST00000451107 PLEKHG5O94827 1062 aa27.11■■□□□ 1.93
FGD6-202ENST00000451107 PXDNQ92626 1479 aa27.11■■□□□ 1.93
FGD6-202ENST00000451107 NPM2Q86SE8 214 aaKnown RBP27.1■■□□□ 1.93
FGD6-202ENST00000451107 AKAP4Q5JQC9 854 aa27.09■■□□□ 1.93
FGD6-202ENST00000451107 ABCC6O95255 1503 aa27.09■■□□□ 1.93
FGD6-202ENST00000451107 SLC4A2P04920 1241 aa27.09■■□□□ 1.93
FGD6-202ENST00000451107 AXIN2Q9Y2T1 843 aa27.08■■□□□ 1.93
FGD6-202ENST00000451107 ERICH6Q7L0X2 663 aa27.08■■□□□ 1.92
FGD6-202ENST00000451107 RGPD5Q99666 1765 aa27.07■■□□□ 1.92
FGD6-202ENST00000451107 DDX17Q92841 729 aaKnown RBP27.07■■□□□ 1.92
FGD6-202ENST00000451107 FAM208AQ9UK61 1670 aaKnown RBP27.07■■□□□ 1.92
FGD6-202ENST00000451107 ERBB3P21860 1342 aa27.07■■□□□ 1.92
FGD6-202ENST00000451107 ZNF530Q6P9A1 599 aaPredicted RBP27.06■■□□□ 1.92
FGD6-202ENST00000451107 STK31Q9BXU1 1019 aa27.06■■□□□ 1.92
FGD6-202ENST00000451107 OVOS2A0A0G2JMS6 1433 aa27.06■■□□□ 1.92
FGD6-202ENST00000451107 ZC3H6P61129 1189 aaKnown RBP27.06■■□□□ 1.92
FGD6-202ENST00000451107 CCDC30Q5VVM6 783 aa27.06■■□□□ 1.92
FGD6-202ENST00000451107 SPATA31A3Q5VYP0 1347 aa27.06■■□□□ 1.92
FGD6-202ENST00000451107 CRYBG1Q9Y4K1 1723 aa27.04■■□□□ 1.92
FGD6-202ENST00000451107 NOP58Q9Y2X3 529 aaKnown RBP27.04■■□□□ 1.92
FGD6-202ENST00000451107 GCC1Q96CN9 775 aa27.04■■□□□ 1.92
FGD6-202ENST00000451107 COL18A1P39060 1754 aa27.03■■□□□ 1.92
FGD6-202ENST00000451107 CACNA1FO60840 1977 aa27.03■■□□□ 1.92
FGD6-202ENST00000451107 KDM3BQ7LBC6 1761 aa27.03■■□□□ 1.92
FGD6-202ENST00000451107 C1orf141Q5JVX7 400 aa27.02■■□□□ 1.92
FGD6-202ENST00000451107 BRINP3Q76B58 766 aa27.01■■□□□ 1.91
FGD6-202ENST00000451107 C1orf115Q9H7X2 142 aa27.01■■□□□ 1.91
FGD6-202ENST00000451107 NUCB1Q02818 461 aa27.01■■□□□ 1.91
FGD6-202ENST00000451107 LGR6Q9HBX8 967 aa27■■□□□ 1.91
FGD6-202ENST00000451107 TEFQ10587 303 aa27■■□□□ 1.91
FGD6-202ENST00000451107 CHMP4AQ9BY43 222 aa27■■□□□ 1.91
FGD6-202ENST00000451107 ZBTB47Q9UFB7 747 aaPredicted RBP27■■□□□ 1.91
FGD6-202ENST00000451107 ZNF335Q9H4Z2 1342 aaPredicted RBP26.99■■□□□ 1.91
FGD6-202ENST00000451107 DDRGK1Q96HY6 314 aa26.99■■□□□ 1.91
FGD6-202ENST00000451107 CPDO75976 1380 aa26.99■■□□□ 1.91
FGD6-202ENST00000451107 PLEKHG2Q9H7P9 1386 aa26.98■■□□□ 1.91
FGD6-202ENST00000451107 HOXB7P09629 217 aa26.98■■□□□ 1.91
FGD6-202ENST00000451107 CCT4P50991 539 aaKnown RBP26.98■■□□□ 1.91
FGD6-202ENST00000451107 G2E3Q7L622 706 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms