RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-223ENST00000449864 R3HDM1Q15032 1099 aaKnown RBP21.66■■□□□ 1.06
HDLBP-223ENST00000449864 DDX54Q8TDD1 881 aaKnown RBP21.66■■□□□ 1.06
HDLBP-223ENST00000449864 ACSBG1Q96GR2 724 aa21.66■■□□□ 1.06
HDLBP-223ENST00000449864 KNSTRNQ9Y448 316 aa21.66■■□□□ 1.06
HDLBP-223ENST00000449864 PLSCR1O15162 318 aa21.65■■□□□ 1.06
HDLBP-223ENST00000449864 WASHC2AQ641Q2 1341 aa21.64■■□□□ 1.05
HDLBP-223ENST00000449864 NBPF14Q5TI25 921 aa21.64■■□□□ 1.05
HDLBP-223ENST00000449864 TATP17735 454 aaPredicted RBP21.63■■□□□ 1.05
HDLBP-223ENST00000449864 ZCRB1Q8TBF4 217 aaKnown RBP21.63■■□□□ 1.05
HDLBP-223ENST00000449864 POLKQ9UBT6 870 aa21.63■■□□□ 1.05
HDLBP-223ENST00000449864 KCNQ2O43526 872 aa21.62■■□□□ 1.05
HDLBP-223ENST00000449864 MORC1Q86VD1 984 aa21.62■■□□□ 1.05
HDLBP-223ENST00000449864 ITGB4P16144 1822 aa21.61■■□□□ 1.05
HDLBP-223ENST00000449864 NCAPD2Q15021 1401 aa21.61■■□□□ 1.05
HDLBP-223ENST00000449864 LY75O60449 1722 aa21.59■■□□□ 1.05
HDLBP-223ENST00000449864 TOGARAM1Q9Y4F4 1720 aa21.58■■□□□ 1.05
HDLBP-223ENST00000449864 PCDH11XQ9BZA7 1347 aa21.57■■□□□ 1.04
HDLBP-223ENST00000449864 PCDH11YQ9BZA8 1340 aa21.57■■□□□ 1.04
HDLBP-223ENST00000449864 CASZ1Q86V15 1759 aa21.56■■□□□ 1.04
HDLBP-223ENST00000449864 SYTL4Q96C24 671 aaPredicted RBP21.56■■□□□ 1.04
HDLBP-223ENST00000449864 PAPPAQ13219 1627 aa21.55■■□□□ 1.04
HDLBP-223ENST00000449864 EIF4A2Q14240 407 aaKnown RBP21.55■■□□□ 1.04
HDLBP-223ENST00000449864 TXNRD1Q16881 649 aa21.55■■□□□ 1.04
HDLBP-223ENST00000449864 AMER1Q5JTC6 1135 aaPredicted RBP21.55■■□□□ 1.04
HDLBP-223ENST00000449864 EYA1Q99502 592 aa21.55■■□□□ 1.04
HDLBP-223ENST00000449864 PRIM1P49642 420 aaKnown RBP21.52■■□□□ 1.04
HDLBP-223ENST00000449864 PROM2Q8N271 834 aa21.52■■□□□ 1.04
HDLBP-223ENST00000449864 TUBGCP6Q96RT7 1819 aa21.51■■□□□ 1.03
HDLBP-223ENST00000449864 ANO8Q9HCE9 1232 aaPredicted RBP21.51■■□□□ 1.03
HDLBP-223ENST00000449864 SPG7Q9UQ90 795 aa21.51■■□□□ 1.03
HDLBP-223ENST00000449864 QSER1Q2KHR3 1735 aa21.51■■□□□ 1.03
HDLBP-223ENST00000449864 CC2D1BQ5T0F9 858 aaKnown RBP21.5■■□□□ 1.03
HDLBP-223ENST00000449864 STK32BQ9NY57 414 aa21.5■■□□□ 1.03
HDLBP-223ENST00000449864 C5P01031 1676 aa21.49■■□□□ 1.03
HDLBP-223ENST00000449864 IGSF1Q8N6C5 1336 aa21.49■■□□□ 1.03
HDLBP-223ENST00000449864 SRCAPQ6ZRS2 3230 aa21.48■■□□□ 1.03
HDLBP-223ENST00000449864 VIRMAQ69YN4 1812 aaKnown RBP21.48■■□□□ 1.03
HDLBP-223ENST00000449864 TAF1LQ8IZX4 1826 aa21.48■■□□□ 1.03
HDLBP-223ENST00000449864 CYP27B1O15528 508 aa21.48■■□□□ 1.03
HDLBP-223ENST00000449864 PER1O15534 1290 aaPredicted RBP21.48■■□□□ 1.03
HDLBP-223ENST00000449864 CNGB1Q14028 1251 aaPredicted RBP21.47■■□□□ 1.03
HDLBP-223ENST00000449864 PLEKHG2Q9H7P9 1386 aa21.46■■□□□ 1.03
HDLBP-223ENST00000449864 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.45■■□□□ 1.023e-15■□□□□ 10.1
HDLBP-223ENST00000449864 NPC1L1Q9UHC9 1359 aa21.45■■□□□ 1.02
HDLBP-223ENST00000449864 SLC15A2Q16348 729 aa21.44■■□□□ 1.02
HDLBP-223ENST00000449864 SLC27A3Q5K4L6 730 aa21.44■■□□□ 1.02
HDLBP-223ENST00000449864 MTHFSP49914 203 aa21.42■■□□□ 1.02
HDLBP-223ENST00000449864 MPRIPQ6WCQ1 1025 aa21.42■■□□□ 1.02
HDLBP-223ENST00000449864 IFNL2Q8IZJ0 200 aa21.41■■□□□ 1.02
HDLBP-223ENST00000449864 SPON1Q9HCB6 807 aa21.41■■□□□ 1.02
HDLBP-223ENST00000449864 LRRC4BQ9NT99 713 aa21.41■■□□□ 1.02
HDLBP-223ENST00000449864 SCN11AQ9UI33 1791 aa21.41■■□□□ 1.02
HDLBP-223ENST00000449864 PHKG2P15735 406 aa21.4■■□□□ 1.02
HDLBP-223ENST00000449864 CCNL1Q9UK58 526 aaPredicted RBP21.4■■□□□ 1.02
HDLBP-223ENST00000449864 IL13P35225 146 aa21.39■■□□□ 1.01
HDLBP-223ENST00000449864 NKX1-1Q15270 411 aaPredicted RBP21.39■■□□□ 1.01
HDLBP-223ENST00000449864 SULT6B1Q6IMI4 303 aa21.39■■□□□ 1.01
HDLBP-223ENST00000449864 AEBP1Q8IUX7 1158 aa21.39■■□□□ 1.01
HDLBP-223ENST00000449864 PALLDQ8WX93 1383 aa21.38■■□□□ 1.01
HDLBP-223ENST00000449864 KCNQ4P56696 695 aa21.38■■□□□ 1.01
HDLBP-223ENST00000449864 PLEKHO1Q53GL0 409 aaPredicted RBP21.38■■□□□ 1.01
HDLBP-223ENST00000449864 PDGFDQ9GZP0 370 aaPredicted RBP21.38■■□□□ 1.01
HDLBP-223ENST00000449864 KDRP35968 1356 aa21.37■■□□□ 1.01
HDLBP-223ENST00000449864 ZNF827Q17R98 1081 aa21.37■■□□□ 1.01
HDLBP-223ENST00000449864 PPP1R1BQ9UD71 204 aaPredicted RBP21.37■■□□□ 1.01
HDLBP-223ENST00000449864 ZBTB7AO95365 584 aa21.36■■□□□ 1.01
HDLBP-223ENST00000449864 AMOTQ4VCS5 1084 aa21.36■■□□□ 1.01
HDLBP-223ENST00000449864 ZNF530Q6P9A1 599 aaPredicted RBP21.36■■□□□ 1.01
HDLBP-223ENST00000449864 TMOD3Q9NYL9 352 aa21.36■■□□□ 1.01
HDLBP-223ENST00000449864 C4BP0C0L5 1744 aa21.35■■□□□ 1.01
HDLBP-223ENST00000449864 COL3A1P02461 1466 aaPredicted RBP21.35■■□□□ 1.01
HDLBP-223ENST00000449864 SMARCC1Q92922 1105 aaPredicted RBP21.35■■□□□ 1.01
HDLBP-223ENST00000449864 DIAPH1O60610 1272 aaKnown RBP21.34■■□□□ 1.01
HDLBP-223ENST00000449864 HSP90AB1P08238 724 aaKnown RBP21.34■■□□□ 1.01
HDLBP-223ENST00000449864 C1orf141Q5JVX7 400 aa21.34■■□□□ 1.01
HDLBP-223ENST00000449864 PIGBQ92521 554 aa21.34■■□□□ 1.01
HDLBP-223ENST00000449864 AKT1S1Q96B36 256 aa21.34■■□□□ 1.01
HDLBP-223ENST00000449864 UBR3Q6ZT12 1888 aa21.32■■□□□ 1
HDLBP-223ENST00000449864 COL24A1Q17RW2 1714 aa21.32■■□□□ 1
HDLBP-223ENST00000449864 TFCP2L1Q9NZI6 479 aa21.32■■□□□ 1
HDLBP-223ENST00000449864 KDM6AO15550 1401 aaPredicted RBP21.31■■□□□ 1
HDLBP-223ENST00000449864 HMOX1P09601 288 aa21.31■■□□□ 1
HDLBP-223ENST00000449864 DCAF5Q96JK2 942 aa21.31■■□□□ 1
HDLBP-223ENST00000449864 MTFR1LQ9H019 292 aa21.31■■□□□ 1
HDLBP-223ENST00000449864 ATF5Q9Y2D1 282 aaPredicted RBP21.31■■□□□ 1
HDLBP-223ENST00000449864 ZNF831Q5JPB2 1677 aa21.31■■□□□ 1
HDLBP-223ENST00000449864 HMGB2P26583 209 aaKnown RBP21.3■■□□□ 1
HDLBP-223ENST00000449864 CFAP53Q96M91 514 aa21.29■■□□□ 1
HDLBP-223ENST00000449864 COL5A3P25940 1745 aaPredicted RBP21.29■■□□□ 1
HDLBP-223ENST00000449864 PNPLA7Q6ZV29 1317 aa21.29■■□□□ 1
HDLBP-223ENST00000449864 ERVV-2B6SEH9 535 aa21.28■■□□□ 1
HDLBP-223ENST00000449864 U2SURPO15042 1029 aaKnown RBP21.28■■□□□ 1
HDLBP-223ENST00000449864 ADAMTS7Q9UKP4 1686 aa21.26■□□□□ 0.99
HDLBP-223ENST00000449864 ASAP1Q9ULH1 1129 aa21.26■□□□□ 0.99
HDLBP-223ENST00000449864 MSH5O43196 834 aa21.25■□□□□ 0.99
HDLBP-223ENST00000449864 PTGER2P43116 358 aa21.25■□□□□ 0.99
HDLBP-223ENST00000449864 CABP4P57796 275 aa21.25■□□□□ 0.99
HDLBP-223ENST00000449864 LOC102724428A0A0B4J2F2 783 aa21.24■□□□□ 0.99
HDLBP-223ENST00000449864 PPP2R1AP30153 589 aa21.24■□□□□ 0.99
HDLBP-223ENST00000449864 SIK1P57059 783 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms