RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 MAP3K5Q99683 1374 aa12.5□□□□□ -0.41
RFC4-210ENST00000449502 ABCC6O95255 1503 aa12.5□□□□□ -0.41
RFC4-210ENST00000449502 ROBO1Q9Y6N7 1651 aa12.5□□□□□ -0.41
RFC4-210ENST00000449502 NHSL1Q5SYE7 1610 aa12.49□□□□□ -0.41
RFC4-210ENST00000449502 WDR17Q8IZU2 1322 aa12.49□□□□□ -0.41
RFC4-210ENST00000449502 RNF123Q5XPI4 1314 aa12.48□□□□□ -0.41
RFC4-210ENST00000449502 ADAMTS2O95450 1211 aa12.48□□□□□ -0.41
RFC4-210ENST00000449502 BTG4Q9NY30 223 aa12.48□□□□□ -0.41
RFC4-210ENST00000449502 TSPYL4Q9UJ04 414 aa12.48□□□□□ -0.41
RFC4-210ENST00000449502 PHRF1Q9P1Y6 1649 aaKnown RBP12.48□□□□□ -0.41
RFC4-210ENST00000449502 CARD10Q9BWT7 1032 aa12.47□□□□□ -0.41
RFC4-210ENST00000449502 MBIPQ9NS73 344 aa12.47□□□□□ -0.41
RFC4-210ENST00000449502 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
RFC4-210ENST00000449502 HSP90AB1P08238 724 aaKnown RBP12.46□□□□□ -0.41
RFC4-210ENST00000449502 ZNF853P0CG23 659 aa12.46□□□□□ -0.41
RFC4-210ENST00000449502 RARSP54136 660 aaKnown RBP12.46□□□□□ -0.41
RFC4-210ENST00000449502 TEFQ10587 303 aa12.46□□□□□ -0.41
RFC4-210ENST00000449502 ZNF428Q96B54 188 aa12.46□□□□□ -0.41
RFC4-210ENST00000449502 SMC4Q9NTJ3 1288 aa12.46□□□□□ -0.41
RFC4-210ENST00000449502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.413e-9■□□□□ 9.5
RFC4-210ENST00000449502 LTN1O94822 1766 aa12.46□□□□□ -0.42
RFC4-210ENST00000449502 JCADQ9P266 1359 aa12.45□□□□□ -0.42
RFC4-210ENST00000449502 CHL1O00533 1208 aa12.45□□□□□ -0.42
RFC4-210ENST00000449502 PLIN1O60240 522 aa12.45□□□□□ -0.42
RFC4-210ENST00000449502 IL2RBP14784 551 aa12.45□□□□□ -0.42
RFC4-210ENST00000449502 TAF7Q15545 349 aaPredicted RBP12.45□□□□□ -0.42
RFC4-210ENST00000449502 LARP1Q6PKG0 1096 aaKnown RBP12.45□□□□□ -0.42
RFC4-210ENST00000449502 FRAT1Q92837 279 aaPredicted RBP12.45□□□□□ -0.42
RFC4-210ENST00000449502 BABAM1Q9NWV8 329 aa12.45□□□□□ -0.42
RFC4-210ENST00000449502 PLEKHG2Q9H7P9 1386 aa12.44□□□□□ -0.42
RFC4-210ENST00000449502 BCAR3O75815 825 aa12.44□□□□□ -0.42
RFC4-210ENST00000449502 MS4A1P11836 297 aa12.44□□□□□ -0.42
RFC4-210ENST00000449502 TWISTNBQ3B726 338 aaPredicted RBP12.44□□□□□ -0.42
RFC4-210ENST00000449502 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
RFC4-210ENST00000449502 PPP4R2Q9NY27 417 aa12.44□□□□□ -0.42
RFC4-210ENST00000449502 USP35Q9P2H5 1018 aa12.44□□□□□ -0.42
RFC4-210ENST00000449502 NCAPD2Q15021 1401 aa12.44□□□□□ -0.42
RFC4-210ENST00000449502 COL5A2P05997 1499 aaPredicted RBP12.43□□□□□ -0.42
RFC4-210ENST00000449502 ELL2O00472 640 aaPredicted RBP12.43□□□□□ -0.42
RFC4-210ENST00000449502 IPO8O15397 1037 aaKnown RBP12.43□□□□□ -0.42
RFC4-210ENST00000449502 RNMTO43148 476 aaKnown RBP12.43□□□□□ -0.42
RFC4-210ENST00000449502 MPRIPQ6WCQ1 1025 aa12.43□□□□□ -0.42
RFC4-210ENST00000449502 PELP1Q8IZL8 1130 aaKnown RBP12.43□□□□□ -0.42
RFC4-210ENST00000449502 IL17REQ8NFR9 667 aa12.43□□□□□ -0.42
RFC4-210ENST00000449502 ZCRB1Q8TBF4 217 aaKnown RBP12.43□□□□□ -0.42
RFC4-210ENST00000449502 ALDH1L2Q3SY69 923 aa12.42□□□□□ -0.42
RFC4-210ENST00000449502 BCL2L13Q9BXK5 485 aa12.42□□□□□ -0.42
RFC4-210ENST00000449502 CHMP4AQ9BY43 222 aa12.42□□□□□ -0.42
RFC4-210ENST00000449502 MIS18AQ9NYP9 233 aa12.42□□□□□ -0.42
RFC4-210ENST00000449502 CCDC9Q9Y3X0 531 aaKnown RBP12.42□□□□□ -0.42
RFC4-210ENST00000449502 CRB1P82279 1406 aa12.42□□□□□ -0.42
RFC4-210ENST00000449502 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
RFC4-210ENST00000449502 PHLPP1O60346 1717 aa12.41□□□□□ -0.42
RFC4-210ENST00000449502 PHKG2P15735 406 aa12.41□□□□□ -0.42
RFC4-210ENST00000449502 MEX3CQ5U5Q3 659 aaKnown RBP12.41□□□□□ -0.42
RFC4-210ENST00000449502 ZKSCAN2Q63HK3 967 aa12.41□□□□□ -0.42
RFC4-210ENST00000449502 LGR6Q9HBX8 967 aa12.41□□□□□ -0.42
RFC4-210ENST00000449502 SPATA31A6Q5VVP1 1343 aa12.4□□□□□ -0.42
RFC4-210ENST00000449502 KIF16BQ96L93 1317 aa12.4□□□□□ -0.42
RFC4-210ENST00000449502 PCDH11XQ9BZA7 1347 aa12.4□□□□□ -0.42
RFC4-210ENST00000449502 PCDH11YQ9BZA8 1340 aa12.4□□□□□ -0.42
RFC4-210ENST00000449502 BTBD11A6QL63 1104 aa12.4□□□□□ -0.42
RFC4-210ENST00000449502 VAMP4O75379 141 aa12.4□□□□□ -0.42
RFC4-210ENST00000449502 FTSJ3Q8IY81 847 aaKnown RBP12.4□□□□□ -0.42
RFC4-210ENST00000449502 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
RFC4-210ENST00000449502 SSH1Q8WYL5 1049 aa12.4□□□□□ -0.42
RFC4-210ENST00000449502 NGLY1Q96IV0 654 aa12.4□□□□□ -0.42
RFC4-210ENST00000449502 DCAF5Q96JK2 942 aa12.4□□□□□ -0.42
RFC4-210ENST00000449502 CABP4P57796 275 aa12.39□□□□□ -0.43
RFC4-210ENST00000449502 PDE3AQ14432 1141 aa12.39□□□□□ -0.43
RFC4-210ENST00000449502 TSPYL6Q8N831 410 aa12.39□□□□□ -0.43
RFC4-210ENST00000449502 DDX54Q8TDD1 881 aaKnown RBP12.39□□□□□ -0.43
RFC4-210ENST00000449502 C8orf37Q96NL8 207 aa12.39□□□□□ -0.43
RFC4-210ENST00000449502 CRBNQ96SW2 442 aa12.39□□□□□ -0.43
RFC4-210ENST00000449502 CDCA7Q9BWT1 371 aaPredicted RBP12.39□□□□□ -0.43
RFC4-210ENST00000449502 COL16A1Q07092 1604 aaPredicted RBP12.39□□□□□ -0.43
RFC4-210ENST00000449502 SOS1Q07889 1333 aaPredicted RBP12.38□□□□□ -0.43
RFC4-210ENST00000449502 OVOS2A0A0G2JMS6 1433 aa12.38□□□□□ -0.43
RFC4-210ENST00000449502 MEGF6O75095 1541 aa12.38□□□□□ -0.43
RFC4-210ENST00000449502 HSPA1LP34931 641 aa12.38□□□□□ -0.43
RFC4-210ENST00000449502 EXOC6Q8TAG9 804 aa12.38□□□□□ -0.43
RFC4-210ENST00000449502 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
RFC4-210ENST00000449502 STK31Q9BXU1 1019 aa12.38□□□□□ -0.43
RFC4-210ENST00000449502 CEMIPQ8WUJ3 1361 aa12.38□□□□□ -0.43
RFC4-210ENST00000449502 COL22A1Q8NFW1 1626 aaPredicted RBP12.37□□□□□ -0.43
RFC4-210ENST00000449502 NOB1Q9ULX3 412 aaKnown RBP12.37□□□□□ -0.43
RFC4-210ENST00000449502 THRAP3Q9Y2W1 955 aaKnown RBP12.37□□□□□ -0.43
RFC4-210ENST00000449502 CRYBG1Q9Y4K1 1723 aa12.37□□□□□ -0.43
RFC4-210ENST00000449502 COL18A1P39060 1754 aa12.36□□□□□ -0.43
RFC4-210ENST00000449502 EXOC5O00471 708 aa12.36□□□□□ -0.43
RFC4-210ENST00000449502 C20orf194Q5TEA3 1177 aa12.36□□□□□ -0.43
RFC4-210ENST00000449502 CCDC30Q5VVM6 783 aa12.36□□□□□ -0.43
RFC4-210ENST00000449502 ATF7IPQ6VMQ6 1270 aa12.36□□□□□ -0.43
RFC4-210ENST00000449502 UNC5CLQ8IV45 518 aa12.36□□□□□ -0.43
RFC4-210ENST00000449502 DZIP1LQ8IYY4 767 aaKnown RBP12.36□□□□□ -0.43
RFC4-210ENST00000449502 TTC5Q8N0Z6 440 aa12.36□□□□□ -0.43
RFC4-210ENST00000449502 API5Q9BZZ5 524 aaKnown RBP12.36□□□□□ -0.43
RFC4-210ENST00000449502 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
RFC4-210ENST00000449502 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
RFC4-210ENST00000449502 TCERG1O14776 1098 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms