RNA–Protein interactions for RNA: ENST00000448325.1

RAB28P3-201, Transcript of RAB28, member RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAB28P3, Length 597 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P3-201ENST00000448325 NBPF14Q5TI25 921 aa8.56□□□□□ -1.04
RAB28P3-201ENST00000448325 GAS2L2Q8NHY3 880 aa8.56□□□□□ -1.04
RAB28P3-201ENST00000448325 LRCH3Q96II8 777 aa8.56□□□□□ -1.04
RAB28P3-201ENST00000448325 HINFPQ9BQA5 517 aa8.56□□□□□ -1.04
RAB28P3-201ENST00000448325 NUDT12Q9BQG2 462 aa8.56□□□□□ -1.04
RAB28P3-201ENST00000448325 PPP1R1BQ9UD71 204 aaPredicted RBP8.56□□□□□ -1.04
RAB28P3-201ENST00000448325 RBM19Q9Y4C8 960 aaKnown RBP8.56□□□□□ -1.04
RAB28P3-201ENST00000448325 BHMG1C9JSJ3 638 aaPredicted RBP8.55□□□□□ -1.04
RAB28P3-201ENST00000448325 HRO43593 1189 aa8.55□□□□□ -1.04
RAB28P3-201ENST00000448325 GIGYF1O75420 1035 aaPredicted RBP8.55□□□□□ -1.04
RAB28P3-201ENST00000448325 ARHGAP4P98171 946 aa8.55□□□□□ -1.04
RAB28P3-201ENST00000448325 ZBTB33Q86T24 672 aa8.55□□□□□ -1.04
RAB28P3-201ENST00000448325 DZIP3Q86Y13 1208 aaKnown RBP8.55□□□□□ -1.04
RAB28P3-201ENST00000448325 CCDC125Q86Z20 511 aa8.55□□□□□ -1.04
RAB28P3-201ENST00000448325 PURBQ96QR8 312 aaKnown RBP8.55□□□□□ -1.04
RAB28P3-201ENST00000448325 NBPF3Q9H094 633 aa8.55□□□□□ -1.04
RAB28P3-201ENST00000448325 APLP1P51693 650 aa8.54□□□□□ -1.04
RAB28P3-201ENST00000448325 FKBP4Q02790 459 aaKnown RBP eCLIP8.54□□□□□ -1.04
RAB28P3-201ENST00000448325 PSME1Q06323 249 aa8.54□□□□□ -1.04
RAB28P3-201ENST00000448325 NAALADL2Q58DX5 795 aa8.54□□□□□ -1.04
RAB28P3-201ENST00000448325 ZSCAN29Q8IWY8 852 aaPredicted RBP8.54□□□□□ -1.04
RAB28P3-201ENST00000448325 PRR14Q9BWN1 585 aa8.54□□□□□ -1.04
RAB28P3-201ENST00000448325 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.54□□□□□ -1.04
RAB28P3-201ENST00000448325 PCDHGA11Q9Y5H2 935 aa8.54□□□□□ -1.04
RAB28P3-201ENST00000448325 NR1I2O75469 434 aa8.53□□□□□ -1.04
RAB28P3-201ENST00000448325 DXOO77932 396 aaKnown RBP8.53□□□□□ -1.04
RAB28P3-201ENST00000448325 EAPPQ56P03 285 aaPredicted RBP8.53□□□□□ -1.04
RAB28P3-201ENST00000448325 FAM160A2Q8N612 972 aaPredicted RBP8.53□□□□□ -1.04
RAB28P3-201ENST00000448325 PRDM9Q9NQV7 894 aa8.53□□□□□ -1.04
RAB28P3-201ENST00000448325 FKBP5Q13451 457 aaPredicted RBP8.52□□□□□ -1.05
RAB28P3-201ENST00000448325 SH3BP5LQ7L8J4 393 aa8.52□□□□□ -1.05
RAB28P3-201ENST00000448325 CARD14Q9BXL6 1004 aa8.52□□□□□ -1.05
RAB28P3-201ENST00000448325 PCDHB3Q9Y5E6 796 aa8.52□□□□□ -1.05
RAB28P3-201ENST00000448325 C9orf131Q5VYM1 1079 aa8.51□□□□□ -1.05
RAB28P3-201ENST00000448325 TSEN2Q8NCE0 465 aaKnown RBP8.51□□□□□ -1.05
RAB28P3-201ENST00000448325 BACH2Q9BYV9 841 aa8.51□□□□□ -1.05
RAB28P3-201ENST00000448325 SMARCA5O60264 1052 aaPredicted RBP8.5□□□□□ -1.05
RAB28P3-201ENST00000448325 P4HBP07237 508 aaKnown RBP8.5□□□□□ -1.05
RAB28P3-201ENST00000448325 ERCC5P28715 1186 aaPredicted RBP8.5□□□□□ -1.05
RAB28P3-201ENST00000448325 WEE1P30291 646 aa8.5□□□□□ -1.05
RAB28P3-201ENST00000448325 SF3B2Q13435 895 aaKnown RBP8.5□□□□□ -1.05
RAB28P3-201ENST00000448325 NAA30Q147X3 362 aaPredicted RBP8.5□□□□□ -1.05
RAB28P3-201ENST00000448325 COL19A1Q14993 1142 aa8.5□□□□□ -1.05
RAB28P3-201ENST00000448325 MSS51Q4VC12 460 aa8.5□□□□□ -1.05
RAB28P3-201ENST00000448325 PTCRAQ6ISU1 281 aaPredicted RBP8.5□□□□□ -1.05
RAB28P3-201ENST00000448325 RGL4Q8IZJ4 473 aa8.5□□□□□ -1.05
RAB28P3-201ENST00000448325 MRPL50Q8N5N7 158 aaKnown RBP8.5□□□□□ -1.05
RAB28P3-201ENST00000448325 MAGEB6P1A0A0J9YX57 407 aa8.49□□□□□ -1.05
RAB28P3-201ENST00000448325 MMP16P51512 607 aa8.49□□□□□ -1.05
RAB28P3-201ENST00000448325 PPP4CP60510 307 aa8.49□□□□□ -1.05
RAB28P3-201ENST00000448325 HDLBPQ00341 1268 aaKnown RBP8.49□□□□□ -1.05
RAB28P3-201ENST00000448325 UBXN4Q92575 508 aa8.48□□□□□ -1.05
RAB28P3-201ENST00000448325 UNC93B1Q9H1C4 597 aa8.48□□□□□ -1.05
RAB28P3-201ENST00000448325 MRPL58Q14197 206 aaKnown RBP8.47□□□□□ -1.05
RAB28P3-201ENST00000448325 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.47□□□□□ -1.05
RAB28P3-201ENST00000448325 SPSB2Q99619 263 aa8.47□□□□□ -1.05
RAB28P3-201ENST00000448325 HPS5Q9UPZ3 1129 aa8.47□□□□□ -1.05
RAB28P3-201ENST00000448325 PCDHB11Q9Y5F2 797 aa8.47□□□□□ -1.05
RAB28P3-201ENST00000448325 LDLRAD1Q5T700 205 aa8.46□□□□□ -1.06
RAB28P3-201ENST00000448325 ZNF787Q6DD87 383 aa8.46□□□□□ -1.06
RAB28P3-201ENST00000448325 TMC7Q7Z402 723 aa8.46□□□□□ -1.06
RAB28P3-201ENST00000448325 CCDC24Q8N4L8 307 aa8.46□□□□□ -1.06
RAB28P3-201ENST00000448325 LCE2BO14633 110 aa8.45□□□□□ -1.06
RAB28P3-201ENST00000448325 PTCD1O75127 700 aaKnown RBP8.45□□□□□ -1.06
RAB28P3-201ENST00000448325 BCAMP50895 628 aa8.45□□□□□ -1.06
RAB28P3-201ENST00000448325 USP4Q13107 963 aa8.45□□□□□ -1.06
RAB28P3-201ENST00000448325 ERFEQ4G0M1 354 aa8.45□□□□□ -1.06
RAB28P3-201ENST00000448325 SH3RF1Q7Z6J0 888 aa8.45□□□□□ -1.06
RAB28P3-201ENST00000448325 HELQQ8TDG4 1101 aa8.45□□□□□ -1.06
RAB28P3-201ENST00000448325 SPATA32Q96LK8 384 aa8.45□□□□□ -1.06
RAB28P3-201ENST00000448325 SCAMP3O14828 347 aaKnown RBP8.44□□□□□ -1.06
RAB28P3-201ENST00000448325 SF3A1Q15459 793 aaKnown RBP8.44□□□□□ -1.06
RAB28P3-201ENST00000448325 RNF20Q5VTR2 975 aa8.44□□□□□ -1.06
RAB28P3-201ENST00000448325 FOXJ1Q92949 421 aa8.44□□□□□ -1.06
RAB28P3-201ENST00000448325 FAM161BQ96MY7 647 aa8.44□□□□□ -1.06
RAB28P3-201ENST00000448325 BCL11AQ9H165 835 aa8.44□□□□□ -1.06
RAB28P3-201ENST00000448325 GFRA3O60609 400 aa8.43□□□□□ -1.06
RAB28P3-201ENST00000448325 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
RAB28P3-201ENST00000448325 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
RAB28P3-201ENST00000448325 PIK3R5Q8WYR1 880 aa8.43□□□□□ -1.06
RAB28P3-201ENST00000448325 BAP1Q92560 729 aa8.43□□□□□ -1.06
RAB28P3-201ENST00000448325 ZNF775Q96BV0 537 aaPredicted RBP8.43□□□□□ -1.06
RAB28P3-201ENST00000448325 RBCK1Q9BYM8 510 aa8.43□□□□□ -1.06
RAB28P3-201ENST00000448325 RNF19AQ9NV58 838 aa8.43□□□□□ -1.06
RAB28P3-201ENST00000448325 ZNF358Q9NW07 568 aa8.43□□□□□ -1.06
RAB28P3-201ENST00000448325 SOWAHBA6NEL2 793 aa8.42□□□□□ -1.06
RAB28P3-201ENST00000448325 ESPNB1AK53 854 aa8.42□□□□□ -1.06
RAB28P3-201ENST00000448325 M0R2N6 131 aa8.42□□□□□ -1.06
RAB28P3-201ENST00000448325 FAM13AO94988 1023 aa8.42□□□□□ -1.06
RAB28P3-201ENST00000448325 NPR3P17342 541 aa8.42□□□□□ -1.06
RAB28P3-201ENST00000448325 MPSTP25325 297 aa8.42□□□□□ -1.06
RAB28P3-201ENST00000448325 AGERQ15109 404 aa8.42□□□□□ -1.06
RAB28P3-201ENST00000448325 ANKK1Q8NFD2 765 aa8.42□□□□□ -1.06
RAB28P3-201ENST00000448325 TSR3Q9UJK0 312 aaKnown RBP8.42□□□□□ -1.06
RAB28P3-201ENST00000448325 PPM1GO15355 546 aaPredicted RBP8.41□□□□□ -1.06
RAB28P3-201ENST00000448325 COPS2P61201 443 aa8.41□□□□□ -1.06
RAB28P3-201ENST00000448325 RAD51AP2Q09MP3 1159 aa8.41□□□□□ -1.06
RAB28P3-201ENST00000448325 COL26A1Q96A83 441 aa8.41□□□□□ -1.06
RAB28P3-201ENST00000448325 SLC10A4Q96EP9 437 aa8.41□□□□□ -1.06
RAB28P3-201ENST00000448325 TREHO43280 583 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms