RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 ZCRB1Q8TBF4 217 aaKnown RBP33.54■■■□□ 2.96
NUP50-211ENST00000445721 COL24A1Q17RW2 1714 aa33.53■■■□□ 2.96
NUP50-211ENST00000445721 CCNL1Q9UK58 526 aaPredicted RBP33.53■■■□□ 2.96
NUP50-211ENST00000445721 TUBGCP6Q96RT7 1819 aa33.53■■■□□ 2.96
NUP50-211ENST00000445721 AMPHP49418 695 aa33.52■■■□□ 2.96
NUP50-211ENST00000445721 MAP3K19Q56UN5 1328 aa33.52■■■□□ 2.96
NUP50-211ENST00000445721 NSD2O96028 1365 aa33.51■■■□□ 2.96
NUP50-211ENST00000445721 HOXC9P31274 260 aa33.51■■■□□ 2.95
NUP50-211ENST00000445721 COG3Q96JB2 828 aa33.51■■■□□ 2.95
NUP50-211ENST00000445721 FAM208AQ9UK61 1670 aaKnown RBP33.51■■■□□ 2.95
NUP50-211ENST00000445721 FBLN1P23142 703 aa33.5■■■□□ 2.95
NUP50-211ENST00000445721 GRIN3BO60391 1043 aa33.49■■■□□ 2.95
NUP50-211ENST00000445721 YBX3P16989 372 aaKnown RBP eCLIP33.49■■■□□ 2.95
NUP50-211ENST00000445721 PUS7Q96PZ0 661 aaKnown RBP33.49■■■□□ 2.95
NUP50-211ENST00000445721 DOT1LQ8TEK3 1739 aa33.48■■■□□ 2.95
NUP50-211ENST00000445721 COL23A1Q86Y22 540 aaPredicted RBP33.48■■■□□ 2.95
NUP50-211ENST00000445721 CEP350Q5VT06 3117 aa33.48■■■□□ 2.95
NUP50-211ENST00000445721 LY75O60449 1722 aa33.47■■■□□ 2.95
NUP50-211ENST00000445721 USP47Q96K76 1375 aa33.45■■■□□ 2.94
NUP50-211ENST00000445721 MEGF6O75095 1541 aa33.44■■■□□ 2.94
NUP50-211ENST00000445721 MSL1Q68DK7 614 aa33.44■■■□□ 2.94
NUP50-211ENST00000445721 SHANK3Q9BYB0 1731 aa33.44■■■□□ 2.94
NUP50-211ENST00000445721 RGPD2P0DJD1 1756 aa33.41■■■□□ 2.94
NUP50-211ENST00000445721 NBPF6Q5VWK0 638 aa33.4■■■□□ 2.94
NUP50-211ENST00000445721 NBPF4Q96M43 638 aa33.4■■■□□ 2.94
NUP50-211ENST00000445721 USHBP1Q8N6Y0 703 aa33.38■■■□□ 2.93
NUP50-211ENST00000445721 RRS1Q15050 365 aaKnown RBP33.37■■■□□ 2.93
NUP50-211ENST00000445721 RAPGEF4Q8WZA2 1011 aa33.36■■■□□ 2.93
NUP50-211ENST00000445721 IFFO2Q5TF58 517 aa33.35■■■□□ 2.93
NUP50-211ENST00000445721 TESK2Q96S53 571 aa33.35■■■□□ 2.93
NUP50-211ENST00000445721 CGNL1Q0VF96 1302 aa33.34■■■□□ 2.93
NUP50-211ENST00000445721 CD2APQ9Y5K6 639 aa33.33■■■□□ 2.93
NUP50-211ENST00000445721 RTL1A6NKG5 1358 aa33.33■■■□□ 2.93
NUP50-211ENST00000445721 ST20-MTHFSA0A0A6YYL1 179 aa33.32■■■□□ 2.92
NUP50-211ENST00000445721 ATP10DQ9P241 1426 aa33.32■■■□□ 2.92
NUP50-211ENST00000445721 TATP17735 454 aaPredicted RBP33.31■■■□□ 2.92
NUP50-211ENST00000445721 FLAD1Q8NFF5 587 aa33.31■■■□□ 2.92
NUP50-211ENST00000445721 TONSLQ96HA7 1378 aa33.29■■■□□ 2.92
NUP50-211ENST00000445721 HMGB2P26583 209 aaKnown RBP33.28■■■□□ 2.92
NUP50-211ENST00000445721 MPRIPQ6WCQ1 1025 aa33.28■■■□□ 2.92
NUP50-211ENST00000445721 GGNBP2Q9H3C7 697 aa33.28■■■□□ 2.92
NUP50-211ENST00000445721 SMG6Q86US8 1419 aaKnown RBP33.28■■■□□ 2.92
NUP50-211ENST00000445721 PALLDQ8WX93 1383 aa33.27■■■□□ 2.92
NUP50-211ENST00000445721 FYB1O15117 783 aa33.27■■■□□ 2.92
NUP50-211ENST00000445721 GPBP1L1Q9HC44 474 aaPredicted RBP33.27■■■□□ 2.92
NUP50-211ENST00000445721 PCDH11XQ9BZA7 1347 aa33.26■■■□□ 2.91
NUP50-211ENST00000445721 PCDH11YQ9BZA8 1340 aa33.26■■■□□ 2.91
NUP50-211ENST00000445721 C5P01031 1676 aa33.25■■■□□ 2.91
NUP50-211ENST00000445721 SLC24A1O60721 1099 aa33.24■■■□□ 2.91
NUP50-211ENST00000445721 HSP90AB2PQ58FF8 381 aa33.23■■■□□ 2.91
NUP50-211ENST00000445721 ZNF526Q8TF50 670 aaPredicted RBP33.22■■■□□ 2.91
NUP50-211ENST00000445721 AK7Q96M32 723 aa33.21■■■□□ 2.91
NUP50-211ENST00000445721 CYP27B1O15528 508 aa33.2■■■□□ 2.91
NUP50-211ENST00000445721 SMARCC1Q92922 1105 aaPredicted RBP33.19■■■□□ 2.9
NUP50-211ENST00000445721 INSRP06213 1382 aa33.19■■■□□ 2.9
NUP50-211ENST00000445721 SMIM5Q71RC9 77 aa33.18■■■□□ 2.9
NUP50-211ENST00000445721 AMIGO3Q86WK7 504 aa33.18■■■□□ 2.9
NUP50-211ENST00000445721 WWC3Q9ULE0 1092 aa33.18■■■□□ 2.9
NUP50-211ENST00000445721 TAF1LQ8IZX4 1826 aa33.18■■■□□ 2.9
NUP50-211ENST00000445721 PHF14O94880 888 aa33.17■■■□□ 2.9
NUP50-211ENST00000445721 ADCY9O60503 1353 aa33.15■■■□□ 2.9
NUP50-211ENST00000445721 IGSF1Q8N6C5 1336 aa33.15■■■□□ 2.9
NUP50-211ENST00000445721 FLT4P35916 1363 aa33.14■■■□□ 2.9
NUP50-211ENST00000445721 HSPA6P17066 643 aa33.14■■■□□ 2.9
NUP50-211ENST00000445721 C4BP0C0L5 1744 aa33.14■■■□□ 2.89
NUP50-211ENST00000445721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.13■■■□□ 2.89
NUP50-211ENST00000445721 PIGBQ92521 554 aa33.13■■■□□ 2.89
NUP50-211ENST00000445721 TMF1P82094 1093 aa33.11■■■□□ 2.89
NUP50-211ENST00000445721 KIF24Q5T7B8 1368 aa33.09■■■□□ 2.89
NUP50-211ENST00000445721 ITGB4P16144 1822 aa33.08■■■□□ 2.89
NUP50-211ENST00000445721 NSD3Q9BZ95 1437 aa33.08■■■□□ 2.89
NUP50-211ENST00000445721 SSFA2P28290 1259 aa33.07■■■□□ 2.88
NUP50-211ENST00000445721 TOGARAM1Q9Y4F4 1720 aa33.07■■■□□ 2.88
NUP50-211ENST00000445721 LOC102724428A0A0B4J2F2 783 aa33.06■■■□□ 2.88
NUP50-211ENST00000445721 SIK1P57059 783 aa33.06■■■□□ 2.88
NUP50-211ENST00000445721 LINC00116Q8NCU8 138 aa33.06■■■□□ 2.88
NUP50-211ENST00000445721 EMILIN1Q9Y6C2 1016 aa33.06■■■□□ 2.88
NUP50-211ENST00000445721 UBR3Q6ZT12 1888 aa33.05■■■□□ 2.88
NUP50-211ENST00000445721 NKX1-1Q15270 411 aaPredicted RBP33.05■■■□□ 2.88
NUP50-211ENST00000445721 SPG7Q9UQ90 795 aa33.05■■■□□ 2.88
NUP50-211ENST00000445721 PPM1GO15355 546 aaPredicted RBP33.03■■■□□ 2.88
NUP50-211ENST00000445721 GNPATO15228 680 aa33.01■■■□□ 2.87
NUP50-211ENST00000445721 TMOD3Q9NYL9 352 aa33.01■■■□□ 2.87
NUP50-211ENST00000445721 KIF20BQ96Q89 1820 aa33■■■□□ 2.87
NUP50-211ENST00000445721 ASAP1Q9ULH1 1129 aa33■■■□□ 2.87
NUP50-211ENST00000445721 PKD1L3Q7Z443 1732 aa32.99■■■□□ 2.87
NUP50-211ENST00000445721 ITPK1Q13572 414 aa32.99■■■□□ 2.87
NUP50-211ENST00000445721 KIF3CO14782 793 aa32.98■■■□□ 2.87
NUP50-211ENST00000445721 CARD14Q9BXL6 1004 aa32.98■■■□□ 2.87
NUP50-211ENST00000445721 ATP6V1AP38606 617 aa32.97■■■□□ 2.87
NUP50-211ENST00000445721 CDCA8Q53HL2 280 aa32.97■■■□□ 2.87
NUP50-211ENST00000445721 MAP2P11137 1827 aaKnown RBP32.97■■■□□ 2.87
NUP50-211ENST00000445721 MMP10P09238 476 aa32.96■■■□□ 2.87
NUP50-211ENST00000445721 NCAPD2Q15021 1401 aa32.94■■■□□ 2.86
NUP50-211ENST00000445721 EYA1Q99502 592 aa32.94■■■□□ 2.86
NUP50-211ENST00000445721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.94■■■□□ 2.864e-6■□□□□ 11.2
NUP50-211ENST00000445721 IFNL2Q8IZJ0 200 aa32.91■■■□□ 2.86
NUP50-211ENST00000445721 ATG3Q9NT62 314 aa32.91■■■□□ 2.86
NUP50-211ENST00000445721 WASHC2AQ641Q2 1341 aa32.91■■■□□ 2.86
NUP50-211ENST00000445721 PHKG2P15735 406 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms