RNA–Protein interactions for RNA: ENST00000444658.7

CCNDBP1-202, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-202ENST00000444658 HAP1P54257 671 aaPredicted RBP11.97□□□□□ -0.49
CCNDBP1-202ENST00000444658 BRPF1P55201 1214 aaPredicted RBP11.97□□□□□ -0.49
CCNDBP1-202ENST00000444658 ZC3H6P61129 1189 aaKnown RBP11.97□□□□□ -0.49
CCNDBP1-202ENST00000444658 GNAT3A8MTJ3 354 aa11.96□□□□□ -0.49
CCNDBP1-202ENST00000444658 RARSP54136 660 aaKnown RBP11.96□□□□□ -0.49
CCNDBP1-202ENST00000444658 PLEKHO1Q53GL0 409 aaPredicted RBP11.96□□□□□ -0.49
CCNDBP1-202ENST00000444658 RTF1Q92541 710 aaKnown RBP11.96□□□□□ -0.49
CCNDBP1-202ENST00000444658 PPP4R2Q9NY27 417 aa11.96□□□□□ -0.49
CCNDBP1-202ENST00000444658 FANCIQ9NVI1 1328 aa11.96□□□□□ -0.49
CCNDBP1-202ENST00000444658 PDE3AQ14432 1141 aa11.95□□□□□ -0.5
CCNDBP1-202ENST00000444658 ALDH1L2Q3SY69 923 aa11.95□□□□□ -0.5
CCNDBP1-202ENST00000444658 LTV1Q96GA3 475 aaPredicted RBP11.95□□□□□ -0.5
CCNDBP1-202ENST00000444658 CABLES1Q8TDN4 633 aa11.95□□□□□ -0.5
CCNDBP1-202ENST00000444658 EXOSC9Q06265 439 aaKnown RBP11.94□□□□□ -0.5
CCNDBP1-202ENST00000444658 AAMPQ13685 434 aa11.94□□□□□ -0.5
CCNDBP1-202ENST00000444658 AKAP4Q5JQC9 854 aa11.94□□□□□ -0.5
CCNDBP1-202ENST00000444658 NHSL1Q5SYE7 1610 aa11.94□□□□□ -0.5
CCNDBP1-202ENST00000444658 AHDC1Q5TGY3 1603 aaPredicted RBP11.94□□□□□ -0.5
CCNDBP1-202ENST00000444658 SOS1Q07889 1333 aaPredicted RBP11.94□□□□□ -0.5
CCNDBP1-202ENST00000444658 KIAA0232Q92628 1395 aa11.93□□□□□ -0.5
CCNDBP1-202ENST00000444658 MS4A1P11836 297 aa11.93□□□□□ -0.5
CCNDBP1-202ENST00000444658 CRB1P82279 1406 aa11.93□□□□□ -0.5
CCNDBP1-202ENST00000444658 TSR2Q969E8 191 aaKnown RBP11.92□□□□□ -0.5
CCNDBP1-202ENST00000444658 PRDM11Q9NQV5 511 aa11.92□□□□□ -0.5
CCNDBP1-202ENST00000444658 MBIPQ9NS73 344 aa11.92□□□□□ -0.5
CCNDBP1-202ENST00000444658 ZBTB7CA1YPR0 619 aa11.91□□□□□ -0.5
CCNDBP1-202ENST00000444658 FAM83GA6ND36 823 aa11.91□□□□□ -0.5
CCNDBP1-202ENST00000444658 VAMP4O75379 141 aa11.91□□□□□ -0.5
CCNDBP1-202ENST00000444658 TAF7Q15545 349 aaPredicted RBP11.91□□□□□ -0.5
CCNDBP1-202ENST00000444658 IL17REQ8NFR9 667 aa11.91□□□□□ -0.5
CCNDBP1-202ENST00000444658 RAPGEF4Q8WZA2 1011 aa11.91□□□□□ -0.5
CCNDBP1-202ENST00000444658 CHMP4AQ9BY43 222 aa11.91□□□□□ -0.5
CCNDBP1-202ENST00000444658 WDR17Q8IZU2 1322 aa11.91□□□□□ -0.5
CCNDBP1-202ENST00000444658 CEMIPQ8WUJ3 1361 aa11.91□□□□□ -0.5
CCNDBP1-202ENST00000444658 MAP3K5Q99683 1374 aa11.91□□□□□ -0.5
CCNDBP1-202ENST00000444658 LTN1O94822 1766 aa11.91□□□□□ -0.5
CCNDBP1-202ENST00000444658 BCAR3O75815 825 aa11.9□□□□□ -0.5
CCNDBP1-202ENST00000444658 COL18A1P39060 1754 aa11.9□□□□□ -0.5
CCNDBP1-202ENST00000444658 ARHGAP45Q92619 1136 aa11.9□□□□□ -0.5
CCNDBP1-202ENST00000444658 CARD10Q9BWT7 1032 aa11.9□□□□□ -0.5
CCNDBP1-202ENST00000444658 NLRP2Q9NX02 1062 aa11.9□□□□□ -0.5
CCNDBP1-202ENST00000444658 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
CCNDBP1-202ENST00000444658 IPO8O15397 1037 aaKnown RBP11.89□□□□□ -0.51
CCNDBP1-202ENST00000444658 TATP17735 454 aaPredicted RBP11.89□□□□□ -0.51
CCNDBP1-202ENST00000444658 DCTN1Q14203 1278 aa11.89□□□□□ -0.51
CCNDBP1-202ENST00000444658 MCM10Q7L590 875 aa11.89□□□□□ -0.51
CCNDBP1-202ENST00000444658 USHBP1Q8N6Y0 703 aa11.89□□□□□ -0.51
CCNDBP1-202ENST00000444658 THUMPD2Q9BTF0 503 aaKnown RBP11.89□□□□□ -0.51
CCNDBP1-202ENST00000444658 CRYBG1Q9Y4K1 1723 aa11.89□□□□□ -0.51
CCNDBP1-202ENST00000444658 OVOS2A0A0G2JMS6 1433 aa11.89□□□□□ -0.51
CCNDBP1-202ENST00000444658 CSB-PGBD3P0DP91 1061 aa11.89□□□□□ -0.51
CCNDBP1-202ENST00000444658 CHRNA2Q15822 529 aa11.89□□□□□ -0.51
CCNDBP1-202ENST00000444658 LMO7Q8WWI1 1683 aa11.88□□□□□ -0.51
CCNDBP1-202ENST00000444658 CAMTA1Q9Y6Y1 1673 aa11.88□□□□□ -0.51
CCNDBP1-202ENST00000444658 IRX6P78412 446 aaPredicted RBP11.88□□□□□ -0.51
CCNDBP1-202ENST00000444658 C1orf141Q5JVX7 400 aa11.88□□□□□ -0.51
CCNDBP1-202ENST00000444658 LAS1LQ9Y4W2 734 aaKnown RBP11.88□□□□□ -0.51
CCNDBP1-202ENST00000444658 PLIN1O60240 522 aa11.87□□□□□ -0.51
CCNDBP1-202ENST00000444658 HSP90AB1P08238 724 aaKnown RBP11.87□□□□□ -0.51
CCNDBP1-202ENST00000444658 TWISTNBQ3B726 338 aaPredicted RBP11.87□□□□□ -0.51
CCNDBP1-202ENST00000444658 ZNF530Q6P9A1 599 aaPredicted RBP11.87□□□□□ -0.51
CCNDBP1-202ENST00000444658 CERKQ8TCT0 537 aa11.87□□□□□ -0.51
CCNDBP1-202ENST00000444658 SSH1Q8WYL5 1049 aa11.87□□□□□ -0.51
CCNDBP1-202ENST00000444658 ZBTB12Q9Y330 459 aaPredicted RBP11.87□□□□□ -0.51
CCNDBP1-202ENST00000444658 ROBO1Q9Y6N7 1651 aa11.86□□□□□ -0.51
CCNDBP1-202ENST00000444658 KIF16BQ96L93 1317 aa11.86□□□□□ -0.51
CCNDBP1-202ENST00000444658 UBAP1LF5GYI3 381 aa11.86□□□□□ -0.51
CCNDBP1-202ENST00000444658 EVA1CP58658 441 aa11.86□□□□□ -0.51
CCNDBP1-202ENST00000444658 ZKSCAN2Q63HK3 967 aa11.86□□□□□ -0.51
CCNDBP1-202ENST00000444658 IFNL2Q8IZJ0 200 aa11.86□□□□□ -0.51
CCNDBP1-202ENST00000444658 C8orf58Q8NAV2 365 aa11.86□□□□□ -0.51
CCNDBP1-202ENST00000444658 TSPYL4Q9UJ04 414 aa11.86□□□□□ -0.51
CCNDBP1-202ENST00000444658 RNMTO43148 476 aaKnown RBP11.85□□□□□ -0.51
CCNDBP1-202ENST00000444658 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
CCNDBP1-202ENST00000444658 HOXB7P09629 217 aa11.85□□□□□ -0.51
CCNDBP1-202ENST00000444658 TOM1L2Q6ZVM7 507 aa11.85□□□□□ -0.51
CCNDBP1-202ENST00000444658 EXOC6Q8TAG9 804 aa11.85□□□□□ -0.51
CCNDBP1-202ENST00000444658 COL5A2P05997 1499 aaPredicted RBP11.85□□□□□ -0.51
CCNDBP1-202ENST00000444658 COL22A1Q8NFW1 1626 aaPredicted RBP11.85□□□□□ -0.51
CCNDBP1-202ENST00000444658 PHKG2P15735 406 aa11.84□□□□□ -0.51
CCNDBP1-202ENST00000444658 NKX1-1Q15270 411 aaPredicted RBP11.84□□□□□ -0.51
CCNDBP1-202ENST00000444658 MRPL50Q8N5N7 158 aaKnown RBP11.84□□□□□ -0.51
CCNDBP1-202ENST00000444658 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
CCNDBP1-202ENST00000444658 DCAF5Q96JK2 942 aa11.84□□□□□ -0.51
CCNDBP1-202ENST00000444658 LGR6Q9HBX8 967 aa11.84□□□□□ -0.51
CCNDBP1-202ENST00000444658 SMC4Q9NTJ3 1288 aa11.84□□□□□ -0.51
CCNDBP1-202ENST00000444658 TEFQ10587 303 aa11.83□□□□□ -0.52
CCNDBP1-202ENST00000444658 ATF7IPQ6VMQ6 1270 aa11.83□□□□□ -0.52
CCNDBP1-202ENST00000444658 FAM208AQ9UK61 1670 aaKnown RBP11.83□□□□□ -0.52
CCNDBP1-202ENST00000444658 IL2RBP14784 551 aa11.83□□□□□ -0.52
CCNDBP1-202ENST00000444658 CANXP27824 592 aaKnown RBP11.83□□□□□ -0.52
CCNDBP1-202ENST00000444658 C20orf194Q5TEA3 1177 aa11.83□□□□□ -0.52
CCNDBP1-202ENST00000444658 ZCRB1Q8TBF4 217 aaKnown RBP11.83□□□□□ -0.52
CCNDBP1-202ENST00000444658 CRBNQ96SW2 442 aa11.83□□□□□ -0.52
CCNDBP1-202ENST00000444658 CDCA7Q9BWT1 371 aaPredicted RBP11.83□□□□□ -0.52
CCNDBP1-202ENST00000444658 CHMP4BQ9H444 224 aaKnown RBP11.83□□□□□ -0.52
CCNDBP1-202ENST00000444658 BTG4Q9NY30 223 aa11.83□□□□□ -0.52
CCNDBP1-202ENST00000444658 THRAP3Q9Y2W1 955 aaKnown RBP11.83□□□□□ -0.52
CCNDBP1-202ENST00000444658 PIP4K2BP78356 416 aa11.82□□□□□ -0.52
CCNDBP1-202ENST00000444658 DZIP1LQ8IYY4 767 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms