RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 CHMP5Q9NZZ3 219 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 FOXD4L6Q3SYB3 417 aaPredicted RBP12.92□□□□□ -0.34
TOP3B-210ENST00000444502 FOXD4L3Q6VB84 417 aaPredicted RBP12.92□□□□□ -0.34
TOP3B-210ENST00000444502 SBNO2Q9Y2G9 1366 aa12.92□□□□□ -0.34
TOP3B-210ENST00000444502 ANKRD24Q8TF21 1146 aa12.91□□□□□ -0.34
TOP3B-210ENST00000444502 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
TOP3B-210ENST00000444502 SMARCA5O60264 1052 aaPredicted RBP12.91□□□□□ -0.34
TOP3B-210ENST00000444502 CDC45O75419 566 aa12.91□□□□□ -0.34
TOP3B-210ENST00000444502 PANK2Q9BZ23 570 aa12.91□□□□□ -0.34
TOP3B-210ENST00000444502 SIL1Q9H173 461 aa12.91□□□□□ -0.34
TOP3B-210ENST00000444502 INSRP06213 1382 aa12.9□□□□□ -0.34
TOP3B-210ENST00000444502 MLH3Q9UHC1 1453 aa12.9□□□□□ -0.34
TOP3B-210ENST00000444502 PLCB2Q00722 1185 aa12.9□□□□□ -0.34
TOP3B-210ENST00000444502 EIF4A2Q14240 407 aaKnown RBP12.9□□□□□ -0.34
TOP3B-210ENST00000444502 DNTTIP2Q5QJE6 756 aaKnown RBP12.9□□□□□ -0.34
TOP3B-210ENST00000444502 KDM5AP29375 1690 aaKnown RBP12.9□□□□□ -0.34
TOP3B-210ENST00000444502 ANXA1P04083 346 aa12.9□□□□□ -0.34
TOP3B-210ENST00000444502 IL16Q14005 1332 aa12.9□□□□□ -0.34
TOP3B-210ENST00000444502 ANO2Q9NQ90 1003 aa12.9□□□□□ -0.34
TOP3B-210ENST00000444502 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
TOP3B-210ENST00000444502 ST18O60284 1047 aa12.89□□□□□ -0.35
TOP3B-210ENST00000444502 VAMP4O75379 141 aa12.89□□□□□ -0.35
TOP3B-210ENST00000444502 MYOM2P54296 1465 aa12.89□□□□□ -0.35
TOP3B-210ENST00000444502 E9PCH4 1651 aa12.89□□□□□ -0.35
TOP3B-210ENST00000444502 VPS37DQ86XT2 251 aa12.89□□□□□ -0.35
TOP3B-210ENST00000444502 DIAPH3Q9NSV4 1193 aa12.89□□□□□ -0.35
TOP3B-210ENST00000444502 PPP1R1BQ9UD71 204 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-210ENST00000444502 TET3O43151 1660 aa12.89□□□□□ -0.35
TOP3B-210ENST00000444502 BICDL1Q6ZP65 573 aa12.88□□□□□ -0.35
TOP3B-210ENST00000444502 EXOC6BQ9Y2D4 811 aa12.88□□□□□ -0.35
TOP3B-210ENST00000444502 FBXW7Q969H0 707 aa12.88□□□□□ -0.35
TOP3B-210ENST00000444502 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
TOP3B-210ENST00000444502 INTS3Q68E01 1043 aaKnown RBP12.88□□□□□ -0.35
TOP3B-210ENST00000444502 PDCL3Q9H2J4 239 aa12.88□□□□□ -0.35
TOP3B-210ENST00000444502 ESPNB1AK53 854 aa12.88□□□□□ -0.35
TOP3B-210ENST00000444502 TBC1D2Q9BYX2 928 aa12.88□□□□□ -0.35
TOP3B-210ENST00000444502 SYNMO15061 1565 aa12.87□□□□□ -0.35
TOP3B-210ENST00000444502 GNAI3P08754 354 aa12.87□□□□□ -0.35
TOP3B-210ENST00000444502 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
TOP3B-210ENST00000444502 ZRSR1Q15695 479 aaKnown RBP12.87□□□□□ -0.35
TOP3B-210ENST00000444502 TMEM2Q9UHN6 1383 aa12.87□□□□□ -0.35
TOP3B-210ENST00000444502 GCP02774 474 aa12.87□□□□□ -0.35
TOP3B-210ENST00000444502 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
TOP3B-210ENST00000444502 REC8O95072 547 aa12.87□□□□□ -0.35
TOP3B-210ENST00000444502 GNAI2P04899 355 aa12.87□□□□□ -0.35
TOP3B-210ENST00000444502 EFCAB6Q5THR3 1501 aa12.87□□□□□ -0.35
TOP3B-210ENST00000444502 GOLGA6L4A6NEF3 574 aa12.86□□□□□ -0.35
TOP3B-210ENST00000444502 TOM1O60784 492 aa12.86□□□□□ -0.35
TOP3B-210ENST00000444502 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-210ENST00000444502 KIF6Q6ZMV9 814 aa12.86□□□□□ -0.35
TOP3B-210ENST00000444502 MRPL50Q8N5N7 158 aaKnown RBP12.86□□□□□ -0.35
TOP3B-210ENST00000444502 R3HCC1Q9Y3T6 440 aaKnown RBP12.86□□□□□ -0.35
TOP3B-210ENST00000444502 APPP05067 770 aa12.86□□□□□ -0.35
TOP3B-210ENST00000444502 C8orf37Q96NL8 207 aa12.86□□□□□ -0.35
TOP3B-210ENST00000444502 IL13P35225 146 aa12.86□□□□□ -0.35
TOP3B-210ENST00000444502 DNAJC5Q9H3Z4 198 aa12.86□□□□□ -0.35
TOP3B-210ENST00000444502 TMOD3Q9NYL9 352 aa12.86□□□□□ -0.35
TOP3B-210ENST00000444502 KIF1BO60333 1816 aa12.86□□□□□ -0.35
TOP3B-210ENST00000444502 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
TOP3B-210ENST00000444502 MADDQ8WXG6 1647 aa12.85□□□□□ -0.35
TOP3B-210ENST00000444502 IL1RAPL2Q9NP60 686 aa12.85□□□□□ -0.35
TOP3B-210ENST00000444502 MAP3K19Q56UN5 1328 aa12.85□□□□□ -0.35
TOP3B-210ENST00000444502 TPM2P07951 284 aa12.85□□□□□ -0.35
TOP3B-210ENST00000444502 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
TOP3B-210ENST00000444502 ZBTB40Q9NUA8 1239 aa12.85□□□□□ -0.35
TOP3B-210ENST00000444502 CLCN1P35523 988 aa12.84□□□□□ -0.35
TOP3B-210ENST00000444502 SLC39A6Q13433 755 aa12.84□□□□□ -0.35
TOP3B-210ENST00000444502 HDAC1Q13547 482 aaPredicted RBP12.84□□□□□ -0.35
TOP3B-210ENST00000444502 GNL2Q13823 731 aaKnown RBP12.84□□□□□ -0.35
TOP3B-210ENST00000444502 ARAP3Q8WWN8 1544 aa12.84□□□□□ -0.35
TOP3B-210ENST00000444502 EXOC5O00471 708 aa12.84□□□□□ -0.35
TOP3B-210ENST00000444502 SPHKAPQ2M3C7 1700 aa12.84□□□□□ -0.35
TOP3B-210ENST00000444502 CLASRPQ8N2M8 674 aaKnown RBP12.84□□□□□ -0.35
TOP3B-210ENST00000444502 TBC1D32Q96NH3 1257 aa12.84□□□□□ -0.35
TOP3B-210ENST00000444502 SHROOM2Q13796 1616 aa12.84□□□□□ -0.35
TOP3B-210ENST00000444502 MAP3K4Q9Y6R4 1608 aa12.84□□□□□ -0.35
TOP3B-210ENST00000444502 DDX11L8A8MPP1 907 aa12.84□□□□□ -0.35
TOP3B-210ENST00000444502 PTMAP06454 111 aaKnown RBP12.84□□□□□ -0.35
TOP3B-210ENST00000444502 PIP4K2AP48426 406 aaPredicted RBP12.84□□□□□ -0.35
TOP3B-210ENST00000444502 ABCC3O15438 1527 aa12.84□□□□□ -0.35
TOP3B-210ENST00000444502 MAP4K4O95819 1239 aaPredicted RBP12.83□□□□□ -0.36
TOP3B-210ENST00000444502 CCT4P50991 539 aaKnown RBP12.83□□□□□ -0.36
TOP3B-210ENST00000444502 RPAP2Q8IXW5 612 aaPredicted RBP12.83□□□□□ -0.36
TOP3B-210ENST00000444502 MEIS3Q99687 375 aa12.83□□□□□ -0.36
TOP3B-210ENST00000444502 RNF17Q9BXT8 1623 aaKnown RBP12.83□□□□□ -0.36
TOP3B-210ENST00000444502 SRGAP3O43295 1099 aa12.83□□□□□ -0.36
TOP3B-210ENST00000444502 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
TOP3B-210ENST00000444502 PLEKHF1Q96S99 279 aa12.83□□□□□ -0.36
TOP3B-210ENST00000444502 METP08581 1390 aa12.83□□□□□ -0.36
TOP3B-210ENST00000444502 MTHFSDQ2M296 383 aaKnown RBP12.83□□□□□ -0.36
TOP3B-210ENST00000444502 TTC21AQ8NDW8 1320 aa12.82□□□□□ -0.36
TOP3B-210ENST00000444502 XRCC6P12956 609 aaKnown RBP eCLIP12.82□□□□□ -0.362e-7■■■□□ 15.7
TOP3B-210ENST00000444502 C16orf71Q8IYS4 520 aaPredicted RBP12.82□□□□□ -0.36
TOP3B-210ENST00000444502 ACSBG1Q96GR2 724 aa12.82□□□□□ -0.36
TOP3B-210ENST00000444502 TSHZ3Q63HK5 1081 aa12.82□□□□□ -0.36
TOP3B-210ENST00000444502 LMTK3Q96Q04 1460 aa12.82□□□□□ -0.36
TOP3B-210ENST00000444502 HECW2Q9P2P5 1572 aa12.82□□□□□ -0.36
TOP3B-210ENST00000444502 NUCB1Q02818 461 aa12.81□□□□□ -0.36
TOP3B-210ENST00000444502 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
TOP3B-210ENST00000444502 EYA1Q99502 592 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms