RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 CHD4Q14839 1912 aa19.26■□□□□ 0.67
PTPRE-203ENST00000442830 PDGFDQ9GZP0 370 aaPredicted RBP19.26■□□□□ 0.67
PTPRE-203ENST00000442830 FYB1O15117 783 aa19.24■□□□□ 0.67
PTPRE-203ENST00000442830 RAPGEF4Q8WZA2 1011 aa19.24■□□□□ 0.67
PTPRE-203ENST00000442830 SGIP1Q9BQI5 828 aa19.24■□□□□ 0.67
PTPRE-203ENST00000442830 COL24A1Q17RW2 1714 aa19.23■□□□□ 0.67
PTPRE-203ENST00000442830 INSRP06213 1382 aa19.23■□□□□ 0.67
PTPRE-203ENST00000442830 FLT4P35916 1363 aa19.23■□□□□ 0.67
PTPRE-203ENST00000442830 ARXQ96QS3 562 aa19.23■□□□□ 0.67
PTPRE-203ENST00000442830 SYT17Q9BSW7 474 aa19.23■□□□□ 0.67
PTPRE-203ENST00000442830 MEGF6O75095 1541 aa19.22■□□□□ 0.67
PTPRE-203ENST00000442830 AKT1S1Q96B36 256 aa19.22■□□□□ 0.67
PTPRE-203ENST00000442830 SYTL4Q96C24 671 aaPredicted RBP19.22■□□□□ 0.67
PTPRE-203ENST00000442830 FHDC1Q9C0D6 1143 aaPredicted RBP19.22■□□□□ 0.67
PTPRE-203ENST00000442830 CLSPNQ9HAW4 1339 aa19.22■□□□□ 0.67
PTPRE-203ENST00000442830 POLD1P28340 1107 aa19.21■□□□□ 0.67
PTPRE-203ENST00000442830 GGNBP2Q9H3C7 697 aa19.21■□□□□ 0.67
PTPRE-203ENST00000442830 LRRC4BQ9NT99 713 aa19.21■□□□□ 0.67
PTPRE-203ENST00000442830 TATP17735 454 aaPredicted RBP19.2■□□□□ 0.66
PTPRE-203ENST00000442830 PRIM1P49642 420 aaKnown RBP19.2■□□□□ 0.66
PTPRE-203ENST00000442830 RRS1Q15050 365 aaKnown RBP19.2■□□□□ 0.66
PTPRE-203ENST00000442830 ZNF827Q17R98 1081 aa19.2■□□□□ 0.66
PTPRE-203ENST00000442830 TUBGCP6Q96RT7 1819 aa19.2■□□□□ 0.66
PTPRE-203ENST00000442830 PCDH11XQ9BZA7 1347 aa19.2■□□□□ 0.66
PTPRE-203ENST00000442830 PCDH11YQ9BZA8 1340 aa19.2■□□□□ 0.66
PTPRE-203ENST00000442830 TFCP2L1Q9NZI6 479 aa19.19■□□□□ 0.66
PTPRE-203ENST00000442830 NBPF6Q5VWK0 638 aa19.18■□□□□ 0.66
PTPRE-203ENST00000442830 NBPF4Q96M43 638 aa19.18■□□□□ 0.66
PTPRE-203ENST00000442830 NSD2O96028 1365 aa19.18■□□□□ 0.66
PTPRE-203ENST00000442830 ANKRD26Q9UPS8 1709 aa19.17■□□□□ 0.66
PTPRE-203ENST00000442830 CCNL1Q9UK58 526 aaPredicted RBP19.16■□□□□ 0.66
PTPRE-203ENST00000442830 PKD1L3Q7Z443 1732 aa19.15■□□□□ 0.66
PTPRE-203ENST00000442830 FBLN1P23142 703 aa19.15■□□□□ 0.66
PTPRE-203ENST00000442830 PNPLA7Q6ZV29 1317 aa19.15■□□□□ 0.66
PTPRE-203ENST00000442830 NSD3Q9BZ95 1437 aa19.15■□□□□ 0.66
PTPRE-203ENST00000442830 C5P01031 1676 aa19.14■□□□□ 0.66
PTPRE-203ENST00000442830 UTRNP46939 3433 aa19.14■□□□□ 0.65
PTPRE-203ENST00000442830 MAP2P11137 1827 aaKnown RBP19.13■□□□□ 0.65
PTPRE-203ENST00000442830 TAF1LQ8IZX4 1826 aa19.12■□□□□ 0.65
PTPRE-203ENST00000442830 NCAPD2Q15021 1401 aa19.12■□□□□ 0.65
PTPRE-203ENST00000442830 PLEKHG2Q9H7P9 1386 aa19.12■□□□□ 0.65
PTPRE-203ENST00000442830 HSP90AB2PQ58FF8 381 aa19.12■□□□□ 0.65
PTPRE-203ENST00000442830 FLAD1Q8NFF5 587 aa19.12■□□□□ 0.65
PTPRE-203ENST00000442830 ITGB4P16144 1822 aa19.11■□□□□ 0.65
PTPRE-203ENST00000442830 USHBP1Q8N6Y0 703 aa19.11■□□□□ 0.65
PTPRE-203ENST00000442830 SMARCC1Q92922 1105 aaPredicted RBP19.11■□□□□ 0.65
PTPRE-203ENST00000442830 SPG7Q9UQ90 795 aa19.09■□□□□ 0.65
PTPRE-203ENST00000442830 PALLDQ8WX93 1383 aa19.08■□□□□ 0.65
PTPRE-203ENST00000442830 WASHC2AQ641Q2 1341 aa19.08■□□□□ 0.65
PTPRE-203ENST00000442830 GPR162Q16538 588 aa19.08■□□□□ 0.64
PTPRE-203ENST00000442830 CARD14Q9BXL6 1004 aa19.08■□□□□ 0.64
PTPRE-203ENST00000442830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.08■□□□□ 0.64
PTPRE-203ENST00000442830 ZNF784Q8NCA9 323 aaPredicted RBP19.07■□□□□ 0.64
PTPRE-203ENST00000442830 MSH5O43196 834 aa19.06■□□□□ 0.64
PTPRE-203ENST00000442830 EMILIN1Q9Y6C2 1016 aa19.06■□□□□ 0.64
PTPRE-203ENST00000442830 TOGARAM1Q9Y4F4 1720 aa19.05■□□□□ 0.64
PTPRE-203ENST00000442830 KCNQ4P56696 695 aa19.05■□□□□ 0.64
PTPRE-203ENST00000442830 NKX1-1Q15270 411 aaPredicted RBP19.05■□□□□ 0.64
PTPRE-203ENST00000442830 KLHL34Q8N239 644 aa19.05■□□□□ 0.64
PTPRE-203ENST00000442830 PPM1GO15355 546 aaPredicted RBP19.04■□□□□ 0.64
PTPRE-203ENST00000442830 CYP27B1O15528 508 aa19.04■□□□□ 0.64
PTPRE-203ENST00000442830 C4BP0C0L5 1744 aa19.04■□□□□ 0.64
PTPRE-203ENST00000442830 MPRIPQ6WCQ1 1025 aa19.04■□□□□ 0.64
PTPRE-203ENST00000442830 GRIN3BO60391 1043 aa19.03■□□□□ 0.64
PTPRE-203ENST00000442830 COL23A1Q86Y22 540 aaPredicted RBP19.03■□□□□ 0.64
PTPRE-203ENST00000442830 AK7Q96M32 723 aa19.02■□□□□ 0.64
PTPRE-203ENST00000442830 UBR3Q6ZT12 1888 aa19.02■□□□□ 0.64
PTPRE-203ENST00000442830 EIF4G2P78344 907 aaKnown RBP eCLIP19■□□□□ 0.63
PTPRE-203ENST00000442830 IFNL2Q8IZJ0 200 aa19■□□□□ 0.63
PTPRE-203ENST00000442830 EYA1Q99502 592 aa19■□□□□ 0.63
PTPRE-203ENST00000442830 GOLGB1Q14789 3259 aaKnown RBP18.99■□□□□ 0.63
PTPRE-203ENST00000442830 TMOD3Q9NYL9 352 aa18.99■□□□□ 0.63
PTPRE-203ENST00000442830 POLKQ9UBT6 870 aa18.99■□□□□ 0.63
PTPRE-203ENST00000442830 CD2APQ9Y5K6 639 aa18.99■□□□□ 0.63
PTPRE-203ENST00000442830 PELP1Q8IZL8 1130 aaKnown RBP18.98■□□□□ 0.63
PTPRE-203ENST00000442830 PIGBQ92521 554 aa18.98■□□□□ 0.63
PTPRE-203ENST00000442830 HSP90AB1P08238 724 aaKnown RBP18.97■□□□□ 0.63
PTPRE-203ENST00000442830 SSFA2P28290 1259 aa18.97■□□□□ 0.63
PTPRE-203ENST00000442830 ZNF831Q5JPB2 1677 aa18.97■□□□□ 0.63
PTPRE-203ENST00000442830 LOC102724428A0A0B4J2F2 783 aa18.96■□□□□ 0.63
PTPRE-203ENST00000442830 ADRA2BP18089 450 aa18.96■□□□□ 0.63
PTPRE-203ENST00000442830 SIK1P57059 783 aa18.96■□□□□ 0.63
PTPRE-203ENST00000442830 PHKG2P15735 406 aa18.95■□□□□ 0.62
PTPRE-203ENST00000442830 NLGN2Q8NFZ4 835 aa18.95■□□□□ 0.62
PTPRE-203ENST00000442830 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
PTPRE-203ENST00000442830 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
PTPRE-203ENST00000442830 EIF4A2Q14240 407 aaKnown RBP18.93■□□□□ 0.62
PTPRE-203ENST00000442830 MSL1Q68DK7 614 aa18.93■□□□□ 0.62
PTPRE-203ENST00000442830 IGSF1Q8N6C5 1336 aa18.93■□□□□ 0.62
PTPRE-203ENST00000442830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.92■□□□□ 0.62
PTPRE-203ENST00000442830 ERVV-2B6SEH9 535 aa18.92■□□□□ 0.62
PTPRE-203ENST00000442830 AMOTQ4VCS5 1084 aa18.92■□□□□ 0.62
PTPRE-203ENST00000442830 GIGYF1O75420 1035 aaPredicted RBP18.91■□□□□ 0.62
PTPRE-203ENST00000442830 C1QTNF8P60827 252 aa18.91■□□□□ 0.62
PTPRE-203ENST00000442830 DCAF5Q96JK2 942 aa18.91■□□□□ 0.62
PTPRE-203ENST00000442830 ATP6V1AP38606 617 aa18.9■□□□□ 0.62
PTPRE-203ENST00000442830 PLEKHO1Q53GL0 409 aaPredicted RBP18.9■□□□□ 0.62
PTPRE-203ENST00000442830 PHF14O94880 888 aa18.89■□□□□ 0.61
PTPRE-203ENST00000442830 HSPA5P11021 654 aaKnown RBP18.89■□□□□ 0.61
PTPRE-203ENST00000442830 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms