RNA–Protein interactions for RNA: ENST00000442275.1

LCP1-204, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-204ENST00000442275 CARD11Q9BXL7 1154 aa28.91■■■□□ 2.22
LCP1-204ENST00000442275 TERF2IPQ9NYB0 399 aa28.9■■■□□ 2.22
LCP1-204ENST00000442275 MSH5O43196 834 aa28.89■■■□□ 2.22
LCP1-204ENST00000442275 ANKRD36BQ8N2N9 1353 aa28.88■■■□□ 2.21
LCP1-204ENST00000442275 LY75O60449 1722 aa28.87■■■□□ 2.21
LCP1-204ENST00000442275 SHANK3Q9BYB0 1731 aa28.86■■■□□ 2.21
LCP1-204ENST00000442275 CCNL1Q9UK58 526 aaPredicted RBP28.85■■■□□ 2.21
LCP1-204ENST00000442275 NSD2O96028 1365 aa28.85■■■□□ 2.21
LCP1-204ENST00000442275 RGPD2P0DJD1 1756 aa28.85■■■□□ 2.21
LCP1-204ENST00000442275 YBX3P16989 372 aaKnown RBP eCLIP28.83■■■□□ 2.21
LCP1-204ENST00000442275 FBLN1P23142 703 aa28.83■■■□□ 2.21
LCP1-204ENST00000442275 AMPHP49418 695 aa28.82■■■□□ 2.2
LCP1-204ENST00000442275 ZCRB1Q8TBF4 217 aaKnown RBP28.82■■■□□ 2.2
LCP1-204ENST00000442275 MAP3K19Q56UN5 1328 aa28.82■■■□□ 2.2
LCP1-204ENST00000442275 HOXC9P31274 260 aa28.81■■■□□ 2.2
LCP1-204ENST00000442275 MSL1Q68DK7 614 aa28.81■■■□□ 2.2
LCP1-204ENST00000442275 MEGF6O75095 1541 aa28.8■■■□□ 2.2
LCP1-204ENST00000442275 COG3Q96JB2 828 aa28.8■■■□□ 2.2
LCP1-204ENST00000442275 GRIN3BO60391 1043 aa28.79■■■□□ 2.2
LCP1-204ENST00000442275 COL23A1Q86Y22 540 aaPredicted RBP28.79■■■□□ 2.2
LCP1-204ENST00000442275 USP47Q96K76 1375 aa28.78■■■□□ 2.2
LCP1-204ENST00000442275 CEP350Q5VT06 3117 aa28.77■■■□□ 2.2
LCP1-204ENST00000442275 USHBP1Q8N6Y0 703 aa28.75■■■□□ 2.19
LCP1-204ENST00000442275 C5P01031 1676 aa28.71■■■□□ 2.19
LCP1-204ENST00000442275 ATP10DQ9P241 1426 aa28.71■■■□□ 2.19
LCP1-204ENST00000442275 RRS1Q15050 365 aaKnown RBP28.71■■■□□ 2.19
LCP1-204ENST00000442275 IFFO2Q5TF58 517 aa28.71■■■□□ 2.19
LCP1-204ENST00000442275 NBPF6Q5VWK0 638 aa28.71■■■□□ 2.19
LCP1-204ENST00000442275 NBPF4Q96M43 638 aa28.71■■■□□ 2.19
LCP1-204ENST00000442275 PUS7Q96PZ0 661 aaKnown RBP28.71■■■□□ 2.19
LCP1-204ENST00000442275 RAPGEF4Q8WZA2 1011 aa28.68■■■□□ 2.18
LCP1-204ENST00000442275 RTL1A6NKG5 1358 aa28.66■■■□□ 2.18
LCP1-204ENST00000442275 TATP17735 454 aaPredicted RBP28.65■■■□□ 2.18
LCP1-204ENST00000442275 SMG6Q86US8 1419 aaKnown RBP28.65■■■□□ 2.18
LCP1-204ENST00000442275 ZNF526Q8TF50 670 aaPredicted RBP28.64■■■□□ 2.18
LCP1-204ENST00000442275 TESK2Q96S53 571 aa28.64■■■□□ 2.18
LCP1-204ENST00000442275 GPBP1L1Q9HC44 474 aaPredicted RBP28.64■■■□□ 2.18
LCP1-204ENST00000442275 CD2APQ9Y5K6 639 aa28.64■■■□□ 2.18
LCP1-204ENST00000442275 CGNL1Q0VF96 1302 aa28.64■■■□□ 2.17
LCP1-204ENST00000442275 TAF1LQ8IZX4 1826 aa28.64■■■□□ 2.17
LCP1-204ENST00000442275 PALLDQ8WX93 1383 aa28.63■■■□□ 2.17
LCP1-204ENST00000442275 TONSLQ96HA7 1378 aa28.63■■■□□ 2.17
LCP1-204ENST00000442275 ST20-MTHFSA0A0A6YYL1 179 aa28.63■■■□□ 2.17
LCP1-204ENST00000442275 MPRIPQ6WCQ1 1025 aa28.63■■■□□ 2.17
LCP1-204ENST00000442275 GGNBP2Q9H3C7 697 aa28.63■■■□□ 2.17
LCP1-204ENST00000442275 WWC3Q9ULE0 1092 aa28.62■■■□□ 2.17
LCP1-204ENST00000442275 FLAD1Q8NFF5 587 aa28.61■■■□□ 2.17
LCP1-204ENST00000442275 PCDH11XQ9BZA7 1347 aa28.61■■■□□ 2.17
LCP1-204ENST00000442275 PCDH11YQ9BZA8 1340 aa28.61■■■□□ 2.17
LCP1-204ENST00000442275 FYB1O15117 783 aa28.58■■■□□ 2.17
LCP1-204ENST00000442275 PHF14O94880 888 aa28.58■■■□□ 2.17
LCP1-204ENST00000442275 AK7Q96M32 723 aa28.58■■■□□ 2.17
LCP1-204ENST00000442275 C4BP0C0L5 1744 aa28.57■■■□□ 2.16
LCP1-204ENST00000442275 HSP90AB2PQ58FF8 381 aa28.57■■■□□ 2.16
LCP1-204ENST00000442275 SMIM5Q71RC9 77 aa28.57■■■□□ 2.16
LCP1-204ENST00000442275 AMIGO3Q86WK7 504 aa28.56■■■□□ 2.16
LCP1-204ENST00000442275 ITGB4P16144 1822 aa28.55■■■□□ 2.16
LCP1-204ENST00000442275 TOGARAM1Q9Y4F4 1720 aa28.55■■■□□ 2.16
LCP1-204ENST00000442275 ADCY9O60503 1353 aa28.55■■■□□ 2.16
LCP1-204ENST00000442275 IGSF1Q8N6C5 1336 aa28.54■■■□□ 2.16
LCP1-204ENST00000442275 CYP27B1O15528 508 aa28.54■■■□□ 2.16
LCP1-204ENST00000442275 INSRP06213 1382 aa28.53■■■□□ 2.16
LCP1-204ENST00000442275 HMGB2P26583 209 aaKnown RBP28.53■■■□□ 2.16
LCP1-204ENST00000442275 HSPA6P17066 643 aa28.52■■■□□ 2.16
LCP1-204ENST00000442275 SMARCC1Q92922 1105 aaPredicted RBP28.52■■■□□ 2.16
LCP1-204ENST00000442275 UBR3Q6ZT12 1888 aa28.52■■■□□ 2.16
LCP1-204ENST00000442275 FLT4P35916 1363 aa28.5■■■□□ 2.15
LCP1-204ENST00000442275 KIF20BQ96Q89 1820 aa28.5■■■□□ 2.15
LCP1-204ENST00000442275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.5■■■□□ 2.15
LCP1-204ENST00000442275 SLC24A1O60721 1099 aa28.49■■■□□ 2.15
LCP1-204ENST00000442275 PIGBQ92521 554 aa28.48■■■□□ 2.15
LCP1-204ENST00000442275 PKD1L3Q7Z443 1732 aa28.46■■■□□ 2.15
LCP1-204ENST00000442275 NSD3Q9BZ95 1437 aa28.45■■■□□ 2.15
LCP1-204ENST00000442275 TMF1P82094 1093 aa28.44■■■□□ 2.14
LCP1-204ENST00000442275 LINC00116Q8NCU8 138 aa28.44■■■□□ 2.14
LCP1-204ENST00000442275 EMILIN1Q9Y6C2 1016 aa28.44■■■□□ 2.14
LCP1-204ENST00000442275 SSFA2P28290 1259 aa28.43■■■□□ 2.14
LCP1-204ENST00000442275 KIF24Q5T7B8 1368 aa28.42■■■□□ 2.14
LCP1-204ENST00000442275 MAP2P11137 1827 aaKnown RBP28.42■■■□□ 2.14
LCP1-204ENST00000442275 LOC102724428A0A0B4J2F2 783 aa28.42■■■□□ 2.14
LCP1-204ENST00000442275 SIK1P57059 783 aa28.42■■■□□ 2.14
LCP1-204ENST00000442275 PPM1GO15355 546 aaPredicted RBP28.41■■■□□ 2.14
LCP1-204ENST00000442275 GNPATO15228 680 aa28.4■■■□□ 2.14
LCP1-204ENST00000442275 SPG7Q9UQ90 795 aa28.4■■■□□ 2.14
LCP1-204ENST00000442275 TMOD3Q9NYL9 352 aa28.39■■■□□ 2.14
LCP1-204ENST00000442275 KIF3CO14782 793 aa28.38■■■□□ 2.13
LCP1-204ENST00000442275 ITPK1Q13572 414 aa28.37■■■□□ 2.13
LCP1-204ENST00000442275 NKX1-1Q15270 411 aaPredicted RBP28.37■■■□□ 2.13
LCP1-204ENST00000442275 ASAP1Q9ULH1 1129 aa28.37■■■□□ 2.13
LCP1-204ENST00000442275 ATP6V1AP38606 617 aa28.36■■■□□ 2.13
LCP1-204ENST00000442275 MMP10P09238 476 aa28.35■■■□□ 2.13
LCP1-204ENST00000442275 N4BP2Q86UW6 1770 aaPredicted RBP28.33■■■□□ 2.13
LCP1-204ENST00000442275 CARD14Q9BXL6 1004 aa28.33■■■□□ 2.13
LCP1-204ENST00000442275 NCAPD2Q15021 1401 aa28.33■■■□□ 2.13
LCP1-204ENST00000442275 CICQ96RK0 1608 aaPredicted RBP28.32■■■□□ 2.12
LCP1-204ENST00000442275 EYA1Q99502 592 aa28.31■■■□□ 2.12
LCP1-204ENST00000442275 BCS1LQ9Y276 419 aa28.31■■■□□ 2.12
LCP1-204ENST00000442275 PXDNLA1KZ92 1463 aa28.31■■■□□ 2.12
LCP1-204ENST00000442275 PHKG2P15735 406 aa28.29■■■□□ 2.12
LCP1-204ENST00000442275 CDCA8Q53HL2 280 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms