RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 CT47B1P0C2W7 299 aaPredicted RBP26.21■■□□□ 1.79
VRK2-207ENST00000440705 ZNF853P0CG23 659 aa26.21■■□□□ 1.79
VRK2-207ENST00000440705 RAPGEF4Q8WZA2 1011 aa26.21■■□□□ 1.79
VRK2-207ENST00000440705 LAS1LQ9Y4W2 734 aaKnown RBP26.21■■□□□ 1.79
VRK2-207ENST00000440705 COL5A2P05997 1499 aaPredicted RBP26.21■■□□□ 1.79
VRK2-207ENST00000440705 MAP3K5Q99683 1374 aa26.2■■□□□ 1.78
VRK2-207ENST00000440705 RRP1P56182 461 aaKnown RBP26.2■■□□□ 1.78
VRK2-207ENST00000440705 MCM10Q7L590 875 aa26.2■■□□□ 1.78
VRK2-207ENST00000440705 PLEKHG2Q9H7P9 1386 aa26.19■■□□□ 1.78
VRK2-207ENST00000440705 EVA1CP58658 441 aa26.18■■□□□ 1.78
VRK2-207ENST00000440705 ERICH6BQ5W0A0 696 aa26.18■■□□□ 1.78
VRK2-207ENST00000440705 COL14A1Q05707 1796 aaKnown RBP26.17■■□□□ 1.78
VRK2-207ENST00000440705 TOM1L2Q6ZVM7 507 aa26.17■■□□□ 1.78
VRK2-207ENST00000440705 TATP17735 454 aaPredicted RBP26.16■■□□□ 1.78
VRK2-207ENST00000440705 EXOSC9Q06265 439 aaKnown RBP26.16■■□□□ 1.78
VRK2-207ENST00000440705 IRX6P78412 446 aaPredicted RBP26.15■■□□□ 1.78
VRK2-207ENST00000440705 AKAP4Q5JQC9 854 aa26.15■■□□□ 1.78
VRK2-207ENST00000440705 ZNF530Q6P9A1 599 aaPredicted RBP26.15■■□□□ 1.78
VRK2-207ENST00000440705 MBIPQ9NS73 344 aa26.15■■□□□ 1.78
VRK2-207ENST00000440705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.15■■□□□ 1.782e-6■■■■□ 23.5
VRK2-207ENST00000440705 CRB1P82279 1406 aa26.14■■□□□ 1.78
VRK2-207ENST00000440705 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.14■■□□□ 1.78
VRK2-207ENST00000440705 C1orf141Q5JVX7 400 aa26.13■■□□□ 1.77
VRK2-207ENST00000440705 CARD10Q9BWT7 1032 aa26.13■■□□□ 1.77
VRK2-207ENST00000440705 BTG4Q9NY30 223 aa26.13■■□□□ 1.77
VRK2-207ENST00000440705 CHL1O00533 1208 aa26.12■■□□□ 1.77
VRK2-207ENST00000440705 STRN4Q9NRL3 753 aa26.12■■□□□ 1.77
VRK2-207ENST00000440705 SPG7Q9UQ90 795 aa26.12■■□□□ 1.77
VRK2-207ENST00000440705 RARSP54136 660 aaKnown RBP26.11■■□□□ 1.77
VRK2-207ENST00000440705 IL17REQ8NFR9 667 aa26.11■■□□□ 1.77
VRK2-207ENST00000440705 LRRC37A3O60309 1634 aa26.1■■□□□ 1.77
VRK2-207ENST00000440705 MEGF6O75095 1541 aa26.1■■□□□ 1.77
VRK2-207ENST00000440705 JCADQ9P266 1359 aa26.09■■□□□ 1.77
VRK2-207ENST00000440705 LARP1Q6PKG0 1096 aaKnown RBP26.09■■□□□ 1.77
VRK2-207ENST00000440705 ZNF428Q96B54 188 aa26.09■■□□□ 1.77
VRK2-207ENST00000440705 CEMIPQ8WUJ3 1361 aa26.08■■□□□ 1.77
VRK2-207ENST00000440705 BCAR3O75815 825 aa26.08■■□□□ 1.77
VRK2-207ENST00000440705 BABAM1Q9NWV8 329 aa26.08■■□□□ 1.77
VRK2-207ENST00000440705 ADAMTS2O95450 1211 aa26.07■■□□□ 1.76
VRK2-207ENST00000440705 NUTM2BA6NNL0 878 aaPredicted RBP26.06■■□□□ 1.76
VRK2-207ENST00000440705 NUTM2EB1AL46 878 aaPredicted RBP26.06■■□□□ 1.76
VRK2-207ENST00000440705 NUTM2AQ8IVF1 878 aaPredicted RBP26.06■■□□□ 1.76
VRK2-207ENST00000440705 PLIN1O60240 522 aa26.06■■□□□ 1.76
VRK2-207ENST00000440705 TAF7Q15545 349 aaPredicted RBP26.06■■□□□ 1.76
VRK2-207ENST00000440705 PARP4Q9UKK3 1724 aaKnown RBP26.06■■□□□ 1.76
VRK2-207ENST00000440705 OVOS2A0A0G2JMS6 1433 aa26.05■■□□□ 1.76
VRK2-207ENST00000440705 TSPYL4Q9UJ04 414 aa26.05■■□□□ 1.76
VRK2-207ENST00000440705 PKD1L3Q7Z443 1732 aa26.04■■□□□ 1.76
VRK2-207ENST00000440705 IL2RBP14784 551 aa26.03■■□□□ 1.76
VRK2-207ENST00000440705 LGR6Q9HBX8 967 aa26.03■■□□□ 1.76
VRK2-207ENST00000440705 RNMTO43148 476 aaKnown RBP26.03■■□□□ 1.76
VRK2-207ENST00000440705 MPRIPQ6WCQ1 1025 aa26.03■■□□□ 1.76
VRK2-207ENST00000440705 IFNL2Q8IZJ0 200 aa26.03■■□□□ 1.76
VRK2-207ENST00000440705 VAMP4O75379 141 aa26.02■■□□□ 1.76
VRK2-207ENST00000440705 TWISTNBQ3B726 338 aaPredicted RBP26.02■■□□□ 1.76
VRK2-207ENST00000440705 ALDH1L2Q3SY69 923 aa26.02■■□□□ 1.76
VRK2-207ENST00000440705 PLCH1Q4KWH8 1693 aa26.02■■□□□ 1.76
VRK2-207ENST00000440705 PHKG2P15735 406 aa26.01■■□□□ 1.75
VRK2-207ENST00000440705 TEFQ10587 303 aa26.01■■□□□ 1.75
VRK2-207ENST00000440705 TSPYL6Q8N831 410 aa26■■□□□ 1.75
VRK2-207ENST00000440705 C8orf58Q8NAV2 365 aa26■■□□□ 1.75
VRK2-207ENST00000440705 MIS18AQ9NYP9 233 aa26■■□□□ 1.75
VRK2-207ENST00000440705 VIRMAQ69YN4 1812 aaKnown RBP26■■□□□ 1.75
VRK2-207ENST00000440705 SPATA31A6Q5VVP1 1343 aa26■■□□□ 1.75
VRK2-207ENST00000440705 HSP90AB1P08238 724 aaKnown RBP25.99■■□□□ 1.75
VRK2-207ENST00000440705 ZCRB1Q8TBF4 217 aaKnown RBP25.99■■□□□ 1.75
VRK2-207ENST00000440705 SMC4Q9NTJ3 1288 aa25.99■■□□□ 1.75
VRK2-207ENST00000440705 CANXP27824 592 aaKnown RBP25.99■■□□□ 1.75
VRK2-207ENST00000440705 ADAMTS7Q9UKP4 1686 aa25.98■■□□□ 1.75
VRK2-207ENST00000440705 SSH1Q8WYL5 1049 aa25.98■■□□□ 1.75
VRK2-207ENST00000440705 BCL2L13Q9BXK5 485 aa25.98■■□□□ 1.75
VRK2-207ENST00000440705 ELL2O00472 640 aaPredicted RBP25.97■■□□□ 1.75
VRK2-207ENST00000440705 PPP4R2Q9NY27 417 aa25.97■■□□□ 1.75
VRK2-207ENST00000440705 USP35Q9P2H5 1018 aa25.97■■□□□ 1.75
VRK2-207ENST00000440705 NWD2Q9ULI1 1742 aa25.97■■□□□ 1.75
VRK2-207ENST00000440705 PCDH11XQ9BZA7 1347 aa25.97■■□□□ 1.75
VRK2-207ENST00000440705 PCDH11YQ9BZA8 1340 aa25.97■■□□□ 1.75
VRK2-207ENST00000440705 CYP27B1O15528 508 aa25.96■■□□□ 1.75
VRK2-207ENST00000440705 PDE3AQ14432 1141 aa25.96■■□□□ 1.75
VRK2-207ENST00000440705 FRAT1Q92837 279 aaPredicted RBP25.96■■□□□ 1.75
VRK2-207ENST00000440705 DCAF5Q96JK2 942 aa25.96■■□□□ 1.75
VRK2-207ENST00000440705 BRPF1P55201 1214 aaPredicted RBP25.95■■□□□ 1.74
VRK2-207ENST00000440705 NRAPQ86VF7 1730 aa25.95■■□□□ 1.74
VRK2-207ENST00000440705 SLIT2O94813 1529 aa25.95■■□□□ 1.74
VRK2-207ENST00000440705 SCN11AQ9UI33 1791 aa25.94■■□□□ 1.74
VRK2-207ENST00000440705 HSPA1LP34931 641 aa25.94■■□□□ 1.74
VRK2-207ENST00000440705 C20orf194Q5TEA3 1177 aa25.93■■□□□ 1.74
VRK2-207ENST00000440705 SOS1Q07889 1333 aaPredicted RBP25.93■■□□□ 1.74
VRK2-207ENST00000440705 BTBD11A6QL63 1104 aa25.93■■□□□ 1.74
VRK2-207ENST00000440705 KIF16BQ96L93 1317 aa25.92■■□□□ 1.74
VRK2-207ENST00000440705 KDM6AO15550 1401 aaPredicted RBP25.91■■□□□ 1.74
VRK2-207ENST00000440705 IPO8O15397 1037 aaKnown RBP25.91■■□□□ 1.74
VRK2-207ENST00000440705 KRT24Q2M2I5 525 aa25.91■■□□□ 1.74
VRK2-207ENST00000440705 ZKSCAN2Q63HK3 967 aa25.91■■□□□ 1.74
VRK2-207ENST00000440705 EXOC6Q8TAG9 804 aa25.91■■□□□ 1.74
VRK2-207ENST00000440705 THRAP3Q9Y2W1 955 aaKnown RBP25.91■■□□□ 1.74
VRK2-207ENST00000440705 MS4A1P11836 297 aa25.9■■□□□ 1.74
VRK2-207ENST00000440705 SIPA1L3O60292 1781 aaPredicted RBP25.9■■□□□ 1.74
VRK2-207ENST00000440705 NGLY1Q96IV0 654 aa25.9■■□□□ 1.74
VRK2-207ENST00000440705 CRBNQ96SW2 442 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms