RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 PANK3Q9H999 370 aa10.24□□□□□ -0.77
VTI1A-202ENST00000432306 IGSF5Q9NSI5 407 aa10.24□□□□□ -0.77
VTI1A-202ENST00000432306 ADAMTS8Q9UP79 889 aa10.24□□□□□ -0.77
VTI1A-202ENST00000432306 CGNL1Q0VF96 1302 aa10.24□□□□□ -0.77
VTI1A-202ENST00000432306 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.24□□□□□ -0.77
VTI1A-202ENST00000432306 HDGFP51858 240 aaKnown RBP10.24□□□□□ -0.77
VTI1A-202ENST00000432306 TMED8Q6PL24 325 aaPredicted RBP10.24□□□□□ -0.77
VTI1A-202ENST00000432306 HAX1O00165 279 aa10.23□□□□□ -0.77
VTI1A-202ENST00000432306 SEMA3EO15041 775 aa10.23□□□□□ -0.77
VTI1A-202ENST00000432306 PPP2R1AP30153 589 aa10.23□□□□□ -0.77
VTI1A-202ENST00000432306 SLC4A3P48751 1232 aa10.23□□□□□ -0.77
VTI1A-202ENST00000432306 BECN1Q14457 450 aa10.23□□□□□ -0.77
VTI1A-202ENST00000432306 SLC52A1Q9NWF4 448 aa10.23□□□□□ -0.77
VTI1A-202ENST00000432306 ASXL1Q8IXJ9 1541 aa10.23□□□□□ -0.77
VTI1A-202ENST00000432306 PLEKHG1Q9ULL1 1385 aa10.23□□□□□ -0.77
VTI1A-202ENST00000432306 FSD2A1L4K1 749 aa10.22□□□□□ -0.77
VTI1A-202ENST00000432306 NBPF1Q3BBV0 1214 aa10.22□□□□□ -0.77
VTI1A-202ENST00000432306 SKAP1Q86WV1 359 aa10.22□□□□□ -0.77
VTI1A-202ENST00000432306 ANKRD13AQ8IZ07 590 aa10.22□□□□□ -0.77
VTI1A-202ENST00000432306 NOS1P29475 1434 aa10.22□□□□□ -0.77
VTI1A-202ENST00000432306 SENP3-EIF4A1A0A087X0R7 540 aa10.21□□□□□ -0.77
VTI1A-202ENST00000432306 NCLP19338 710 aaKnown RBP10.21□□□□□ -0.77
VTI1A-202ENST00000432306 CNGB1Q14028 1251 aaPredicted RBP10.21□□□□□ -0.77
VTI1A-202ENST00000432306 PRDM16Q9HAZ2 1276 aa10.21□□□□□ -0.77
VTI1A-202ENST00000432306 ISY1Q9ULR0 285 aaKnown RBP10.21□□□□□ -0.77
VTI1A-202ENST00000432306 ATF3P18847 181 aa10.21□□□□□ -0.78
VTI1A-202ENST00000432306 CDCA8Q53HL2 280 aa10.21□□□□□ -0.78
VTI1A-202ENST00000432306 SPATA32Q96LK8 384 aa10.21□□□□□ -0.78
VTI1A-202ENST00000432306 DIP2AQ14689 1571 aa10.2□□□□□ -0.78
VTI1A-202ENST00000432306 PDE4DQ08499 809 aa10.2□□□□□ -0.78
VTI1A-202ENST00000432306 CC2D1BQ5T0F9 858 aaKnown RBP10.2□□□□□ -0.78
VTI1A-202ENST00000432306 C19orf44Q9H6X5 657 aa10.2□□□□□ -0.78
VTI1A-202ENST00000432306 TBX22Q9Y458 520 aa10.2□□□□□ -0.78
VTI1A-202ENST00000432306 ARIH1Q9Y4X5 557 aaPredicted RBP10.2□□□□□ -0.78
VTI1A-202ENST00000432306 AFF2P51816 1311 aa10.2□□□□□ -0.78
VTI1A-202ENST00000432306 NUTM2BA6NNL0 878 aaPredicted RBP10.19□□□□□ -0.78
VTI1A-202ENST00000432306 NUTM2EB1AL46 878 aaPredicted RBP10.19□□□□□ -0.78
VTI1A-202ENST00000432306 KDM4AO75164 1064 aa10.19□□□□□ -0.78
VTI1A-202ENST00000432306 CLCN1P35523 988 aa10.19□□□□□ -0.78
VTI1A-202ENST00000432306 KCNA1Q09470 495 aa10.19□□□□□ -0.78
VTI1A-202ENST00000432306 NUTM2AQ8IVF1 878 aaPredicted RBP10.19□□□□□ -0.78
VTI1A-202ENST00000432306 TRIM35Q9UPQ4 493 aa10.19□□□□□ -0.78
VTI1A-202ENST00000432306 ZFYVE9O95405 1425 aa10.19□□□□□ -0.78
VTI1A-202ENST00000432306 RBM6P78332 1123 aaKnown RBP10.19□□□□□ -0.78
VTI1A-202ENST00000432306 WDR43Q15061 677 aaKnown RBP eCLIP10.19□□□□□ -0.78
VTI1A-202ENST00000432306 SMYD5Q6GMV2 418 aa10.19□□□□□ -0.78
VTI1A-202ENST00000432306 FAM117AQ9C073 453 aa10.19□□□□□ -0.78
VTI1A-202ENST00000432306 RIMS2Q9UQ26 1411 aa10.18□□□□□ -0.78
VTI1A-202ENST00000432306 TBC1D32Q96NH3 1257 aa10.18□□□□□ -0.78
VTI1A-202ENST00000432306 PIK3R4Q99570 1358 aa10.18□□□□□ -0.78
VTI1A-202ENST00000432306 RRAGDQ9NQL2 400 aaPredicted RBP10.18□□□□□ -0.78
VTI1A-202ENST00000432306 NHSL1Q5SYE7 1610 aa10.17□□□□□ -0.78
VTI1A-202ENST00000432306 RGS12O14924 1447 aa10.17□□□□□ -0.78
VTI1A-202ENST00000432306 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.17□□□□□ -0.78
VTI1A-202ENST00000432306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.17□□□□□ -0.781e-6■■□□□ 13.5
VTI1A-202ENST00000432306 POGKQ9P215 609 aa10.17□□□□□ -0.78
VTI1A-202ENST00000432306 KNSTRNQ9Y448 316 aa10.17□□□□□ -0.78
VTI1A-202ENST00000432306 TMEM131LA2VDJ0 1609 aa10.17□□□□□ -0.78
VTI1A-202ENST00000432306 SMARCA5O60264 1052 aaPredicted RBP10.16□□□□□ -0.78
VTI1A-202ENST00000432306 IGHDP01880 384 aa10.16□□□□□ -0.78
VTI1A-202ENST00000432306 NUTM2DQ5VT03 806 aaPredicted RBP10.16□□□□□ -0.78
VTI1A-202ENST00000432306 CRISPLD2Q9H0B8 497 aa10.16□□□□□ -0.78
VTI1A-202ENST00000432306 DCCP43146 1447 aa10.16□□□□□ -0.78
VTI1A-202ENST00000432306 POLR3AO14802 1390 aaPredicted RBP10.16□□□□□ -0.78
VTI1A-202ENST00000432306 ATAD2Q6PL18 1390 aa10.16□□□□□ -0.78
VTI1A-202ENST00000432306 TRIM66O15016 1216 aa10.16□□□□□ -0.78
VTI1A-202ENST00000432306 SETQ01105 290 aaPredicted RBP10.16□□□□□ -0.78
VTI1A-202ENST00000432306 BRINP3Q76B58 766 aa10.16□□□□□ -0.78
VTI1A-202ENST00000432306 KRI1Q8N9T8 703 aaKnown RBP10.16□□□□□ -0.78
VTI1A-202ENST00000432306 ZNF526Q8TF50 670 aaPredicted RBP10.16□□□□□ -0.78
VTI1A-202ENST00000432306 NGLY1Q96IV0 654 aa10.16□□□□□ -0.78
VTI1A-202ENST00000432306 QTRT2Q9H974 415 aaKnown RBP10.16□□□□□ -0.78
VTI1A-202ENST00000432306 MYOM1P52179 1685 aa10.16□□□□□ -0.78
VTI1A-202ENST00000432306 TRPM2O94759 1503 aa10.15□□□□□ -0.78
VTI1A-202ENST00000432306 UNCXA6NJT0 531 aa10.15□□□□□ -0.78
VTI1A-202ENST00000432306 RGS3P49796 1198 aa10.15□□□□□ -0.78
VTI1A-202ENST00000432306 GLIPR1L2Q4G1C9 344 aa10.15□□□□□ -0.78
VTI1A-202ENST00000432306 PMFBP1Q8TBY8 1022 aa10.15□□□□□ -0.78
VTI1A-202ENST00000432306 LRRC59Q96AG4 307 aaKnown RBP10.15□□□□□ -0.78
VTI1A-202ENST00000432306 LARP6Q9BRS8 491 aaKnown RBP10.15□□□□□ -0.78
VTI1A-202ENST00000432306 KIAA1210Q9ULL0 1709 aa10.15□□□□□ -0.79
VTI1A-202ENST00000432306 E2F4Q16254 413 aa10.14□□□□□ -0.79
VTI1A-202ENST00000432306 TEX2Q8IWB9 1127 aa10.14□□□□□ -0.79
VTI1A-202ENST00000432306 ADAMTS13Q76LX8 1427 aa10.14□□□□□ -0.79
VTI1A-202ENST00000432306 RRP9O43818 475 aaKnown RBP10.13□□□□□ -0.79
VTI1A-202ENST00000432306 XRCC6P12956 609 aaKnown RBP eCLIP10.13□□□□□ -0.79
VTI1A-202ENST00000432306 ATN1P54259 1190 aaPredicted RBP10.13□□□□□ -0.79
VTI1A-202ENST00000432306 MFSD10Q14728 455 aa10.13□□□□□ -0.79
VTI1A-202ENST00000432306 DPY19L2Q6NUT2 758 aa10.13□□□□□ -0.79
VTI1A-202ENST00000432306 C8orf37Q96NL8 207 aa10.13□□□□□ -0.79
VTI1A-202ENST00000432306 SBNO2Q9Y2G9 1366 aa10.13□□□□□ -0.79
VTI1A-202ENST00000432306 FNBP4Q8N3X1 1017 aaPredicted RBP10.13□□□□□ -0.79
VTI1A-202ENST00000432306 PLEKHG3A1L390 1219 aa10.12□□□□□ -0.79
VTI1A-202ENST00000432306 GOLGA6L3A6NEY3 463 aa10.12□□□□□ -0.79
VTI1A-202ENST00000432306 SEC24BO95487 1268 aa10.12□□□□□ -0.79
VTI1A-202ENST00000432306 MCM4P33991 863 aa10.12□□□□□ -0.79
VTI1A-202ENST00000432306 MRE11P49959 708 aa10.12□□□□□ -0.79
VTI1A-202ENST00000432306 TBC1D2Q9BYX2 928 aa10.12□□□□□ -0.79
VTI1A-202ENST00000432306 UPF2Q9HAU5 1272 aaKnown RBP10.12□□□□□ -0.79
VTI1A-202ENST00000432306 SPHKAPQ2M3C7 1700 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms