RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 WIZO95785 1651 aa13.42□□□□□ -0.26
SEC16A-206ENST00000431893 ERC1Q8IUD2 1116 aa13.42□□□□□ -0.26
SEC16A-206ENST00000431893 CCDC148Q8NFR7 591 aa13.42□□□□□ -0.26
SEC16A-206ENST00000431893 ATF3P18847 181 aa13.42□□□□□ -0.26
SEC16A-206ENST00000431893 CPLX3Q8WVH0 158 aa13.42□□□□□ -0.26
SEC16A-206ENST00000431893 RRP9O43818 475 aaKnown RBP13.42□□□□□ -0.26
SEC16A-206ENST00000431893 HDGFL1Q5TGJ6 251 aa13.42□□□□□ -0.26
SEC16A-206ENST00000431893 URI1O94763 535 aaPredicted RBP13.41□□□□□ -0.26
SEC16A-206ENST00000431893 TDO2P48775 406 aa13.41□□□□□ -0.26
SEC16A-206ENST00000431893 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
SEC16A-206ENST00000431893 INCENPQ9NQS7 918 aa13.41□□□□□ -0.26
SEC16A-206ENST00000431893 ANKRD1Q15327 319 aa13.41□□□□□ -0.26
SEC16A-206ENST00000431893 SERPINA10Q9UK55 444 aa13.41□□□□□ -0.26
SEC16A-206ENST00000431893 NF2P35240 595 aa13.41□□□□□ -0.26
SEC16A-206ENST00000431893 IQCEQ6IPM2 695 aa13.41□□□□□ -0.26
SEC16A-206ENST00000431893 ESCO1Q5FWF5 840 aa13.41□□□□□ -0.26
SEC16A-206ENST00000431893 NOL7Q9UMY1 257 aaKnown RBP13.41□□□□□ -0.26
SEC16A-206ENST00000431893 ZNF76P36508 570 aa13.4□□□□□ -0.26
SEC16A-206ENST00000431893 CRACR2AQ9BSW2 395 aa13.4□□□□□ -0.26
SEC16A-206ENST00000431893 MIA2Q96PC5 1412 aa13.4□□□□□ -0.26
SEC16A-206ENST00000431893 JPH4Q96JJ6 628 aa13.4□□□□□ -0.26
SEC16A-206ENST00000431893 BRD4O60885 1362 aaPredicted RBP13.4□□□□□ -0.26
SEC16A-206ENST00000431893 SHTN1A0MZ66 631 aa13.4□□□□□ -0.26
SEC16A-206ENST00000431893 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEC16A-206ENST00000431893 MAP3K11Q16584 847 aa13.4□□□□□ -0.26
SEC16A-206ENST00000431893 JAKMIP3Q5VZ66 844 aa13.4□□□□□ -0.26
SEC16A-206ENST00000431893 MIS18AQ9NYP9 233 aa13.4□□□□□ -0.26
SEC16A-206ENST00000431893 SULT6B1Q6IMI4 303 aa13.4□□□□□ -0.26
SEC16A-206ENST00000431893 MPHOSPH10O00566 681 aaKnown RBP13.39□□□□□ -0.27
SEC16A-206ENST00000431893 PTPN14Q15678 1187 aa13.39□□□□□ -0.27
SEC16A-206ENST00000431893 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
SEC16A-206ENST00000431893 ZSCAN29Q8IWY8 852 aaPredicted RBP13.39□□□□□ -0.27
SEC16A-206ENST00000431893 TTC16Q8NEE8 873 aa13.39□□□□□ -0.27
SEC16A-206ENST00000431893 UBA5Q9GZZ9 404 aa13.39□□□□□ -0.27
SEC16A-206ENST00000431893 CTNNBL1Q8WYA6 563 aaPredicted RBP13.39□□□□□ -0.27
SEC16A-206ENST00000431893 C16orf45Q96MC5 204 aaPredicted RBP13.39□□□□□ -0.27
SEC16A-206ENST00000431893 NACAP1Q9BZK3 213 aa13.38□□□□□ -0.27
SEC16A-206ENST00000431893 SRGAP3O43295 1099 aa13.38□□□□□ -0.27
SEC16A-206ENST00000431893 USP8P40818 1118 aa13.38□□□□□ -0.27
SEC16A-206ENST00000431893 ISM2Q6H9L7 571 aa13.38□□□□□ -0.27
SEC16A-206ENST00000431893 PPFIA3O75145 1194 aa13.38□□□□□ -0.27
SEC16A-206ENST00000431893 CKAP2LQ8IYA6 745 aa13.38□□□□□ -0.27
SEC16A-206ENST00000431893 GNL3LQ9NVN8 582 aaKnown RBP13.38□□□□□ -0.27
SEC16A-206ENST00000431893 CCDC184Q52MB2 194 aa13.38□□□□□ -0.27
SEC16A-206ENST00000431893 CCDC82Q8N4S0 544 aa13.38□□□□□ -0.27
SEC16A-206ENST00000431893 SMTNL1A8MU46 457 aa13.38□□□□□ -0.27
SEC16A-206ENST00000431893 CABP4P57796 275 aa13.38□□□□□ -0.27
SEC16A-206ENST00000431893 MVPQ14764 893 aaKnown RBP13.38□□□□□ -0.27
SEC16A-206ENST00000431893 GAS2L2Q8NHY3 880 aa13.38□□□□□ -0.27
SEC16A-206ENST00000431893 UBAC1Q9BSL1 405 aa13.38□□□□□ -0.27
SEC16A-206ENST00000431893 CCDC57Q2TAC2 916 aa13.37□□□□□ -0.27
SEC16A-206ENST00000431893 PPP4R3BQ5MIZ7 849 aa13.37□□□□□ -0.27
SEC16A-206ENST00000431893 PSMD1Q99460 953 aa13.37□□□□□ -0.27
SEC16A-206ENST00000431893 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
SEC16A-206ENST00000431893 SLC26A8Q96RN1 970 aa13.37□□□□□ -0.27
SEC16A-206ENST00000431893 CLIP2Q9UDT6 1046 aa13.37□□□□□ -0.27
SEC16A-206ENST00000431893 ATP2C2O75185 946 aa13.37□□□□□ -0.27
SEC16A-206ENST00000431893 IFFO1Q0D2I5 559 aa13.37□□□□□ -0.27
SEC16A-206ENST00000431893 CFAP70Q5T0N1 1121 aa13.37□□□□□ -0.27
SEC16A-206ENST00000431893 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.37□□□□□ -0.27
SEC16A-206ENST00000431893 MACROD2A1Z1Q3 448 aa13.37□□□□□ -0.27
SEC16A-206ENST00000431893 IDH1O75874 414 aaKnown RBP13.36□□□□□ -0.27
SEC16A-206ENST00000431893 AAMPQ13685 434 aa13.36□□□□□ -0.27
SEC16A-206ENST00000431893 KIF4BQ2VIQ3 1234 aa13.36□□□□□ -0.27
SEC16A-206ENST00000431893 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
SEC16A-206ENST00000431893 ZSCAN30Q86W11 494 aa13.36□□□□□ -0.27
SEC16A-206ENST00000431893 GDPD2Q9HCC8 539 aa13.36□□□□□ -0.27
SEC16A-206ENST00000431893 EXOC6BQ9Y2D4 811 aa13.36□□□□□ -0.27
SEC16A-206ENST00000431893 PRPF40BQ6NWY9 871 aaKnown RBP13.36□□□□□ -0.27
SEC16A-206ENST00000431893 TXLNBQ8N3L3 684 aa13.36□□□□□ -0.27
SEC16A-206ENST00000431893 ZNF397Q8NF99 534 aaPredicted RBP13.36□□□□□ -0.27
SEC16A-206ENST00000431893 LIG1P18858 919 aa13.36□□□□□ -0.27
SEC16A-206ENST00000431893 SSFA2P28290 1259 aa13.36□□□□□ -0.27
SEC16A-206ENST00000431893 RBM27Q9P2N5 1060 aaKnown RBP13.36□□□□□ -0.27
SEC16A-206ENST00000431893 USP25Q9UHP3 1055 aa13.36□□□□□ -0.27
SEC16A-206ENST00000431893 RRS1Q15050 365 aaKnown RBP13.35□□□□□ -0.27
SEC16A-206ENST00000431893 TRMT1LQ7Z2T5 733 aaKnown RBP13.35□□□□□ -0.27
SEC16A-206ENST00000431893 SPA17Q15506 151 aa13.35□□□□□ -0.27
SEC16A-206ENST00000431893 CCDC91Q7Z6B0 441 aa13.35□□□□□ -0.27
SEC16A-206ENST00000431893 CEP63Q96MT8 703 aa13.35□□□□□ -0.27
SEC16A-206ENST00000431893 MPHOSPH8Q99549 860 aa13.35□□□□□ -0.27
SEC16A-206ENST00000431893 SRCIN1Q9C0H9 1055 aa13.35□□□□□ -0.27
SEC16A-206ENST00000431893 CCT4P50991 539 aaKnown RBP13.35□□□□□ -0.27
SEC16A-206ENST00000431893 NBPF1Q3BBV0 1214 aa13.35□□□□□ -0.27
SEC16A-206ENST00000431893 ZSWIM4Q9H7M6 989 aa13.35□□□□□ -0.27
SEC16A-206ENST00000431893 CYB5RLQ6IPT4 315 aa13.35□□□□□ -0.27
SEC16A-206ENST00000431893 PRAM1Q96QH2 718 aa13.35□□□□□ -0.27
SEC16A-206ENST00000431893 FAM107BQ9H098 131 aa13.35□□□□□ -0.27
SEC16A-206ENST00000431893 BIN1O00499 593 aa13.34□□□□□ -0.27
SEC16A-206ENST00000431893 NUTM2BA6NNL0 878 aaPredicted RBP13.34□□□□□ -0.27
SEC16A-206ENST00000431893 NUTM2EB1AL46 878 aaPredicted RBP13.34□□□□□ -0.27
SEC16A-206ENST00000431893 ATF7IPQ6VMQ6 1270 aa13.34□□□□□ -0.27
SEC16A-206ENST00000431893 NUTM2AQ8IVF1 878 aaPredicted RBP13.34□□□□□ -0.27
SEC16A-206ENST00000431893 KIF5CO60282 957 aa13.34□□□□□ -0.27
SEC16A-206ENST00000431893 SLC4A8Q2Y0W8 1093 aa13.34□□□□□ -0.27
SEC16A-206ENST00000431893 LUZP1Q86V48 1076 aa13.34□□□□□ -0.27
SEC16A-206ENST00000431893 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
SEC16A-206ENST00000431893 PPM1FP49593 454 aaPredicted RBP13.34□□□□□ -0.27
SEC16A-206ENST00000431893 ANAPC15P60006 121 aa13.34□□□□□ -0.27
SEC16A-206ENST00000431893 TMEM57Q8N5G2 664 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms