RNA–Protein interactions for RNA: ENST00000430725.6

PACS2-202, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 1 (best) BASIC

Gene PACS2, Length 2,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-202ENST00000430725 SSH2Q76I76 1423 aa21.39■■□□□ 1.02
PACS2-202ENST00000430725 ANKLE2Q86XL3 938 aa21.39■■□□□ 1.01
PACS2-202ENST00000430725 ABTB2Q8N961 1025 aa21.39■■□□□ 1.01
PACS2-202ENST00000430725 RIMS1Q86UR5 1692 aaKnown RBP21.38■■□□□ 1.01
PACS2-202ENST00000430725 USP31Q70CQ4 1352 aa21.38■■□□□ 1.01
PACS2-202ENST00000430725 CEP170BQ9Y4F5 1589 aaPredicted RBP21.38■■□□□ 1.01
PACS2-202ENST00000430725 ZBTB7CA1YPR0 619 aa21.37■■□□□ 1.01
PACS2-202ENST00000430725 RBM42Q9BTD8 480 aaKnown RBP21.37■■□□□ 1.01
PACS2-202ENST00000430725 ABCC4O15439 1325 aa21.37■■□□□ 1.01
PACS2-202ENST00000430725 ZNF428Q96B54 188 aa21.36■■□□□ 1.01
PACS2-202ENST00000430725 EYA1Q99502 592 aa21.35■■□□□ 1.01
PACS2-202ENST00000430725 MTHFSDQ2M296 383 aaKnown RBP21.35■■□□□ 1.01
PACS2-202ENST00000430725 OTUD7AQ8TE49 926 aaPredicted RBP21.35■■□□□ 1.01
PACS2-202ENST00000430725 FLT4P35916 1363 aa21.35■■□□□ 1.01
PACS2-202ENST00000430725 CD2BP2O95400 341 aaKnown RBP21.34■■□□□ 1.01
PACS2-202ENST00000430725 BRPF1P55201 1214 aaPredicted RBP21.34■■□□□ 1.01
PACS2-202ENST00000430725 SMARCA5O60264 1052 aaPredicted RBP21.34■■□□□ 1.01
PACS2-202ENST00000430725 ARHGAP45Q92619 1136 aa21.34■■□□□ 1.01
PACS2-202ENST00000430725 NECTIN2Q92692 538 aa21.34■■□□□ 1.01
PACS2-202ENST00000430725 TBC1D9Q6ZT07 1266 aa21.33■■□□□ 1.01
PACS2-202ENST00000430725 HSCBQ8IWL3 235 aa21.33■■□□□ 1.01
PACS2-202ENST00000430725 SBNO1A3KN83 1393 aa21.33■■□□□ 1.01
PACS2-202ENST00000430725 RTF1Q92541 710 aaKnown RBP21.33■■□□□ 1
PACS2-202ENST00000430725 XRN1Q8IZH2 1706 aaKnown RBP21.33■■□□□ 1
PACS2-202ENST00000430725 NALCNQ8IZF0 1738 aa21.32■■□□□ 1
PACS2-202ENST00000430725 F6X3S4 739 aa21.32■■□□□ 1
PACS2-202ENST00000430725 GCC1Q96CN9 775 aa21.32■■□□□ 1
PACS2-202ENST00000430725 API5Q9BZZ5 524 aaKnown RBP21.32■■□□□ 1
PACS2-202ENST00000430725 PHF8Q9UPP1 1060 aa21.32■■□□□ 1
PACS2-202ENST00000430725 ESCO1Q5FWF5 840 aa21.31■■□□□ 1
PACS2-202ENST00000430725 SLC4A10Q6U841 1118 aa21.31■■□□□ 1
PACS2-202ENST00000430725 USHBP1Q8N6Y0 703 aa21.31■■□□□ 1
PACS2-202ENST00000430725 BMP2KLQ5H9B9 411 aa21.3■■□□□ 1
PACS2-202ENST00000430725 PIK3C2AO00443 1686 aa21.3■■□□□ 1
PACS2-202ENST00000430725 CHL1O00533 1208 aa21.3■■□□□ 1
PACS2-202ENST00000430725 GSPT1P15170 499 aaKnown RBP21.3■■□□□ 1
PACS2-202ENST00000430725 G2E3Q7L622 706 aa21.3■■□□□ 1
PACS2-202ENST00000430725 MEIS3Q99687 375 aa21.3■■□□□ 1
PACS2-202ENST00000430725 XPCQ01831 940 aaPredicted RBP21.29■■□□□ 1
PACS2-202ENST00000430725 SLC4A2P04920 1241 aa21.29■■□□□ 1
PACS2-202ENST00000430725 HOXC9P31274 260 aa21.29■■□□□ 1
PACS2-202ENST00000430725 PIK3R4Q99570 1358 aa21.29■■□□□ 1
PACS2-202ENST00000430725 ARHGEF10O15013 1369 aa21.29■■□□□ 1
PACS2-202ENST00000430725 TSPYL4Q9UJ04 414 aa21.28■■□□□ 1
PACS2-202ENST00000430725 KIF2CQ99661 725 aa21.28■■□□□ 1
PACS2-202ENST00000430725 PSME1Q06323 249 aa21.27■■□□□ 1
PACS2-202ENST00000430725 MSH6P52701 1360 aa21.27■■□□□ 1
PACS2-202ENST00000430725 MCM4P33991 863 aa21.27■■□□□ 1
PACS2-202ENST00000430725 ANKARQ7Z5J8 1434 aa21.26■□□□□ 0.99
PACS2-202ENST00000430725 LMOD2Q6P5Q4 547 aa21.26■□□□□ 0.99
PACS2-202ENST00000430725 HSP90AB1P08238 724 aaKnown RBP21.26■□□□□ 0.99
PACS2-202ENST00000430725 RBM25P49756 843 aaKnown RBP21.26■□□□□ 0.99
PACS2-202ENST00000430725 PLEKHM2Q8IWE5 1019 aa21.26■□□□□ 0.99
PACS2-202ENST00000430725 CHMP5Q9NZZ3 219 aa21.26■□□□□ 0.99
PACS2-202ENST00000430725 IGSF1Q8N6C5 1336 aa21.25■□□□□ 0.99
PACS2-202ENST00000430725 SETD1BQ9UPS6 1966 aaKnown RBP21.25■□□□□ 0.99
PACS2-202ENST00000430725 FMN2Q9NZ56 1722 aa21.24■□□□□ 0.99
PACS2-202ENST00000430725 RGPD1P0DJD0 1748 aa21.24■□□□□ 0.99
PACS2-202ENST00000430725 HSP90AA1P07900 732 aaKnown RBP21.23■□□□□ 0.99
PACS2-202ENST00000430725 GAS2L2Q8NHY3 880 aa21.23■□□□□ 0.99
PACS2-202ENST00000430725 RGS12O14924 1447 aa21.22■□□□□ 0.99
PACS2-202ENST00000430725 CRB1P82279 1406 aa21.22■□□□□ 0.99
PACS2-202ENST00000430725 TSHZ3Q63HK5 1081 aa21.22■□□□□ 0.99
PACS2-202ENST00000430725 CHMP4BQ9H444 224 aaKnown RBP21.22■□□□□ 0.99
PACS2-202ENST00000430725 CEP85Q6P2H3 762 aa21.22■□□□□ 0.99
PACS2-202ENST00000430725 DCTPP1Q9H773 170 aa21.22■□□□□ 0.99
PACS2-202ENST00000430725 INTS3Q68E01 1043 aaKnown RBP21.22■□□□□ 0.99
PACS2-202ENST00000430725 ORAI2Q96SN7 254 aa21.22■□□□□ 0.99
PACS2-202ENST00000430725 KDRP35968 1356 aa21.2■□□□□ 0.98
PACS2-202ENST00000430725 ANKRD44Q8N8A2 993 aa21.19■□□□□ 0.98
PACS2-202ENST00000430725 TRAK2O60296 914 aa21.19■□□□□ 0.98
PACS2-202ENST00000430725 CDC45O75419 566 aa21.18■□□□□ 0.98
PACS2-202ENST00000430725 CHD2O14647 1828 aaKnown RBP21.18■□□□□ 0.98
PACS2-202ENST00000430725 ATP10DQ9P241 1426 aa21.18■□□□□ 0.98
PACS2-202ENST00000430725 GNAT3A8MTJ3 354 aa21.18■□□□□ 0.98
PACS2-202ENST00000430725 HAP1P54257 671 aaPredicted RBP21.18■□□□□ 0.98
PACS2-202ENST00000430725 TNPO1Q92973 898 aaKnown RBP21.18■□□□□ 0.98
PACS2-202ENST00000430725 RTL1A6NKG5 1358 aa21.17■□□□□ 0.98
PACS2-202ENST00000430725 TTC22Q5TAA0 569 aa21.17■□□□□ 0.98
PACS2-202ENST00000430725 PANK2Q9BZ23 570 aa21.17■□□□□ 0.98
PACS2-202ENST00000430725 KIAA0232Q92628 1395 aa21.16■□□□□ 0.98
PACS2-202ENST00000430725 EXOC6BQ9Y2D4 811 aa21.16■□□□□ 0.98
PACS2-202ENST00000430725 NPHP4O75161 1426 aaPredicted RBP21.15■□□□□ 0.98
PACS2-202ENST00000430725 SDSP20132 328 aa21.15■□□□□ 0.98
PACS2-202ENST00000430725 IL17REQ8NFR9 667 aa21.15■□□□□ 0.98
PACS2-202ENST00000430725 LRRC59Q96AG4 307 aaKnown RBP21.15■□□□□ 0.98
PACS2-202ENST00000430725 ADGRL3Q9HAR2 1447 aa21.14■□□□□ 0.97
PACS2-202ENST00000430725 NBPF6Q5VWK0 638 aa21.14■□□□□ 0.97
PACS2-202ENST00000430725 PROSER2Q86WR7 435 aaPredicted RBP21.14■□□□□ 0.97
PACS2-202ENST00000430725 SNX21Q969T3 373 aa21.14■□□□□ 0.97
PACS2-202ENST00000430725 NBPF4Q96M43 638 aa21.14■□□□□ 0.97
PACS2-202ENST00000430725 MARF1Q9Y4F3 1742 aaKnown RBP21.13■□□□□ 0.97
PACS2-202ENST00000430725 DDIT3P35638 169 aa21.13■□□□□ 0.97
PACS2-202ENST00000430725 UBE2Q2Q8WVN8 375 aa21.13■□□□□ 0.97
PACS2-202ENST00000430725 IP6K1Q92551 441 aa21.12■□□□□ 0.97
PACS2-202ENST00000430725 FKBP5Q13451 457 aaPredicted RBP21.12■□□□□ 0.97
PACS2-202ENST00000430725 STK31Q9BXU1 1019 aa21.12■□□□□ 0.97
PACS2-202ENST00000430725 K7ELQ4 463 aaPredicted RBP21.11■□□□□ 0.97
PACS2-202ENST00000430725 XRCC6P12956 609 aaKnown RBP eCLIP21.11■□□□□ 0.97
PACS2-202ENST00000430725 SSFA2P28290 1259 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms