RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 LILRA1O75019 489 aa11.81□□□□□ -0.52
PTPRK-211ENST00000429595 ESPNB1AK53 854 aa11.8□□□□□ -0.52
PTPRK-211ENST00000429595 ERVH48-1M5A8F1 160 aa11.8□□□□□ -0.52
PTPRK-211ENST00000429595 ADD1P35611 737 aaKnown RBP11.8□□□□□ -0.52
PTPRK-211ENST00000429595 CCDC155Q8N6L0 562 aa11.8□□□□□ -0.52
PTPRK-211ENST00000429595 KDF1Q8NAX2 398 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-211ENST00000429595 ZNF395Q9H8N7 513 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-211ENST00000429595 GOPCQ9HD26 462 aa11.8□□□□□ -0.52
PTPRK-211ENST00000429595 SLC35F4A4IF30 521 aa11.79□□□□□ -0.52
PTPRK-211ENST00000429595 DZIP3Q86Y13 1208 aaKnown RBP11.79□□□□□ -0.52
PTPRK-211ENST00000429595 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
PTPRK-211ENST00000429595 ADH1AP07327 375 aa11.77□□□□□ -0.53
PTPRK-211ENST00000429595 RNF217Q8TC41 542 aa11.77□□□□□ -0.53
PTPRK-211ENST00000429595 NANOS1Q8WY41 292 aaKnown RBP11.77□□□□□ -0.53
PTPRK-211ENST00000429595 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
PTPRK-211ENST00000429595 TOPBP1Q92547 1522 aa11.76□□□□□ -0.53
PTPRK-211ENST00000429595 ABCC8Q09428 1581 aa11.76□□□□□ -0.53
PTPRK-211ENST00000429595 WIZO95785 1651 aa11.76□□□□□ -0.53
PTPRK-211ENST00000429595 FOXD4L5Q5VV16 416 aaPredicted RBP11.76□□□□□ -0.53
PTPRK-211ENST00000429595 GJD4Q96KN9 370 aaPredicted RBP11.76□□□□□ -0.53
PTPRK-211ENST00000429595 PCMTD1Q96MG8 357 aaPredicted RBP11.76□□□□□ -0.53
PTPRK-211ENST00000429595 CNTNAP3BQ96NU0 1288 aa11.76□□□□□ -0.53
PTPRK-211ENST00000429595 CNTNAP3Q9BZ76 1288 aa11.76□□□□□ -0.53
PTPRK-211ENST00000429595 POLMQ9NP87 494 aaPredicted RBP11.76□□□□□ -0.53
PTPRK-211ENST00000429595 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
PTPRK-211ENST00000429595 SENP3-EIF4A1A0A087X0R7 540 aa11.74□□□□□ -0.53
PTPRK-211ENST00000429595 RNFT1Q5M7Z0 435 aa11.74□□□□□ -0.53
PTPRK-211ENST00000429595 COL25A1Q9BXS0 654 aaPredicted RBP11.74□□□□□ -0.53
PTPRK-211ENST00000429595 ITGA6P23229 1130 aa11.73□□□□□ -0.53
PTPRK-211ENST00000429595 PTGIRP43119 386 aa11.73□□□□□ -0.53
PTPRK-211ENST00000429595 TMEM259Q4ZIN3 620 aa11.73□□□□□ -0.53
PTPRK-211ENST00000429595 CLASP1Q7Z460 1538 aa11.73□□□□□ -0.53
PTPRK-211ENST00000429595 IL27Q8NEV9 243 aa11.73□□□□□ -0.53
PTPRK-211ENST00000429595 FBXO45P0C2W1 286 aa11.72□□□□□ -0.53
PTPRK-211ENST00000429595 NEUROD2Q15784 382 aa11.72□□□□□ -0.53
PTPRK-211ENST00000429595 FBXO41Q8TF61 875 aa11.72□□□□□ -0.53
PTPRK-211ENST00000429595 CYLDQ9NQC7 956 aa11.72□□□□□ -0.53
PTPRK-211ENST00000429595 ZBBXA8MT70 800 aa11.7□□□□□ -0.54
PTPRK-211ENST00000429595 SEPT12Q8IYM1 358 aa11.7□□□□□ -0.54
PTPRK-211ENST00000429595 VWA5B2Q8N398 1253 aa11.7□□□□□ -0.54
PTPRK-211ENST00000429595 GIGYF1O75420 1035 aaPredicted RBP11.69□□□□□ -0.54
PTPRK-211ENST00000429595 GSK3AP49840 483 aa11.69□□□□□ -0.54
PTPRK-211ENST00000429595 TDRD9Q8NDG6 1382 aaKnown RBP11.68□□□□□ -0.54
PTPRK-211ENST00000429595 CDC14CA4D256 554 aa11.68□□□□□ -0.54
PTPRK-211ENST00000429595 SLC24A1O60721 1099 aa11.68□□□□□ -0.54
PTPRK-211ENST00000429595 PCDHB9Q9Y5E1 797 aa11.68□□□□□ -0.54
PTPRK-211ENST00000429595 GPR37L1O60883 481 aa11.67□□□□□ -0.54
PTPRK-211ENST00000429595 FAM69CQ0P6D2 419 aa11.67□□□□□ -0.54
PTPRK-211ENST00000429595 SNAPC4Q5SXM2 1469 aa11.66□□□□□ -0.54
PTPRK-211ENST00000429595 CUEDC1Q9NWM3 386 aaPredicted RBP11.66□□□□□ -0.54
PTPRK-211ENST00000429595 TARBP1Q13395 1621 aaKnown RBP11.65□□□□□ -0.54
PTPRK-211ENST00000429595 BRPF1P55201 1214 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-211ENST00000429595 SV2AQ7L0J3 742 aa11.65□□□□□ -0.54
PTPRK-211ENST00000429595 ERCC6L2Q5T890 1561 aa11.65□□□□□ -0.54
PTPRK-211ENST00000429595 PRDM2Q13029 1718 aa11.65□□□□□ -0.54
PTPRK-211ENST00000429595 DNMBPQ6XZF7 1577 aa11.64□□□□□ -0.55
PTPRK-211ENST00000429595 KCNMA1Q12791 1236 aa11.64□□□□□ -0.55
PTPRK-211ENST00000429595 ZNF385CQ66K41 422 aaPredicted RBP11.64□□□□□ -0.55
PTPRK-211ENST00000429595 WHAMMQ8TF30 809 aa11.64□□□□□ -0.55
PTPRK-211ENST00000429595 LYSMD3Q7Z3D4 306 aa11.63□□□□□ -0.55
PTPRK-211ENST00000429595 LMTK3Q96Q04 1460 aa11.63□□□□□ -0.55
PTPRK-211ENST00000429595 SLURP2P0DP57 97 aa11.62□□□□□ -0.55
PTPRK-211ENST00000429595 RNF144AP50876 292 aaPredicted RBP11.62□□□□□ -0.55
PTPRK-211ENST00000429595 ADAMTS8Q9UP79 889 aa11.62□□□□□ -0.55
PTPRK-211ENST00000429595 SOGA1O94964 1423 aa11.61□□□□□ -0.55
PTPRK-211ENST00000429595 ATP5J2-PTCD1G3V325 749 aa11.61□□□□□ -0.55
PTPRK-211ENST00000429595 RHOQP17081 205 aa11.61□□□□□ -0.55
PTPRK-211ENST00000429595 ERVK-9P63128 1117 aa11.61□□□□□ -0.55
PTPRK-211ENST00000429595 PRICKLE2Q7Z3G6 844 aa11.61□□□□□ -0.55
PTPRK-211ENST00000429595 MAGI1Q96QZ7 1491 aaPredicted RBP11.61□□□□□ -0.55
PTPRK-211ENST00000429595 MTMR14Q8NCE2 650 aa11.6□□□□□ -0.55
PTPRK-211ENST00000429595 SYNJ2O15056 1496 aa11.59□□□□□ -0.55
PTPRK-211ENST00000429595 SCTRP47872 440 aa11.59□□□□□ -0.55
PTPRK-211ENST00000429595 NR1H3Q13133 447 aa11.59□□□□□ -0.55
PTPRK-211ENST00000429595 GAS6Q14393 721 aa11.59□□□□□ -0.55
PTPRK-211ENST00000429595 KIF13AQ9H1H9 1805 aa11.58□□□□□ -0.56
PTPRK-211ENST00000429595 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
PTPRK-211ENST00000429595 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
PTPRK-211ENST00000429595 KDM6BO15054 1643 aa11.58□□□□□ -0.56
PTPRK-211ENST00000429595 CC2D2BQ6DHV5 1058 aa11.58□□□□□ -0.56
PTPRK-211ENST00000429595 SVOPQ8N4V2 548 aa11.58□□□□□ -0.56
PTPRK-211ENST00000429595 TOP2AP11388 1531 aaKnown RBP11.57□□□□□ -0.56
PTPRK-211ENST00000429595 A0A1W2PRU2 124 aa11.57□□□□□ -0.56
PTPRK-211ENST00000429595 MEN1O00255 615 aa11.57□□□□□ -0.56
PTPRK-211ENST00000429595 SOCS7O14512 581 aa11.57□□□□□ -0.56
PTPRK-211ENST00000429595 BANK1Q8NDB2 785 aa11.57□□□□□ -0.56
PTPRK-211ENST00000429595 HECW2Q9P2P5 1572 aa11.57□□□□□ -0.56
PTPRK-211ENST00000429595 GRIN2BQ13224 1484 aa11.57□□□□□ -0.56
PTPRK-211ENST00000429595 ARHGEF15O94989 841 aa11.56□□□□□ -0.56
PTPRK-211ENST00000429595 SNRKQ9NRH2 765 aa11.56□□□□□ -0.56
PTPRK-211ENST00000429595 GPC1P35052 558 aa11.55□□□□□ -0.56
PTPRK-211ENST00000429595 ADAMTS2O95450 1211 aa11.54□□□□□ -0.56
PTPRK-211ENST00000429595 CCDC125Q86Z20 511 aa11.54□□□□□ -0.56
PTPRK-211ENST00000429595 ZNF837Q96EG3 531 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-211ENST00000429595 OSBPL3Q9H4L5 887 aa11.54□□□□□ -0.56
PTPRK-211ENST00000429595 RNF20Q5VTR2 975 aa11.53□□□□□ -0.56
PTPRK-211ENST00000429595 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
PTPRK-211ENST00000429595 PCDHB11Q9Y5F2 797 aa11.53□□□□□ -0.56
PTPRK-211ENST00000429595 NDUFB9Q9Y6M9 179 aa11.53□□□□□ -0.56
PTPRK-211ENST00000429595 TRAK2O60296 914 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms