RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 CD163L1Q9NR16 1453 aa18.41■□□□□ 0.54
CACTIN-203ENST00000429344 RBM10P98175 930 aaKnown RBP18.41■□□□□ 0.54
CACTIN-203ENST00000429344 USHBP1Q8N6Y0 703 aa18.41■□□□□ 0.54
CACTIN-203ENST00000429344 FAM135BQ49AJ0 1406 aa18.4■□□□□ 0.54
CACTIN-203ENST00000429344 FOXO3O43524 673 aa18.4■□□□□ 0.54
CACTIN-203ENST00000429344 PROSER2Q86WR7 435 aaPredicted RBP18.4■□□□□ 0.54
CACTIN-203ENST00000429344 MPNDQ8N594 471 aa18.4■□□□□ 0.54
CACTIN-203ENST00000429344 TSPYL4Q9UJ04 414 aa18.4■□□□□ 0.54
CACTIN-203ENST00000429344 PHF8Q9UPP1 1060 aa18.4■□□□□ 0.54
CACTIN-203ENST00000429344 MAP3K19Q56UN5 1328 aa18.4■□□□□ 0.54
CACTIN-203ENST00000429344 PLEKHG3A1L390 1219 aa18.4■□□□□ 0.54
CACTIN-203ENST00000429344 SMARCA5O60264 1052 aaPredicted RBP18.4■□□□□ 0.54
CACTIN-203ENST00000429344 KRT24Q2M2I5 525 aa18.39■□□□□ 0.53
CACTIN-203ENST00000429344 IL16Q14005 1332 aa18.39■□□□□ 0.53
CACTIN-203ENST00000429344 ADAMTS13Q76LX8 1427 aa18.38■□□□□ 0.53
CACTIN-203ENST00000429344 REREQ9P2R6 1566 aa18.38■□□□□ 0.53
CACTIN-203ENST00000429344 IFT57Q9NWB7 429 aa18.38■□□□□ 0.53
CACTIN-203ENST00000429344 RAB3GAP1Q15042 981 aa18.37■□□□□ 0.53
CACTIN-203ENST00000429344 SKOR2Q2VWA4 1001 aaPredicted RBP18.37■□□□□ 0.53
CACTIN-203ENST00000429344 BMP2KLQ5H9B9 411 aa18.37■□□□□ 0.53
CACTIN-203ENST00000429344 C8orf58Q8NAV2 365 aa18.37■□□□□ 0.53
CACTIN-203ENST00000429344 RNF214Q8ND24 703 aa18.37■□□□□ 0.53
CACTIN-203ENST00000429344 PRPF40AO75400 957 aaKnown RBP18.37■□□□□ 0.53
CACTIN-203ENST00000429344 RBM25P49756 843 aaKnown RBP18.37■□□□□ 0.53
CACTIN-203ENST00000429344 CDC45O75419 566 aa18.37■□□□□ 0.53
CACTIN-203ENST00000429344 KIAA1211Q6ZU35 1233 aa18.37■□□□□ 0.53
CACTIN-203ENST00000429344 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
CACTIN-203ENST00000429344 PKP1Q13835 747 aa18.36■□□□□ 0.53
CACTIN-203ENST00000429344 OTUD7AQ8TE49 926 aaPredicted RBP18.36■□□□□ 0.53
CACTIN-203ENST00000429344 CFAP44Q96MT7 982 aa18.36■□□□□ 0.53
CACTIN-203ENST00000429344 RBM27Q9P2N5 1060 aaKnown RBP18.36■□□□□ 0.53
CACTIN-203ENST00000429344 CHMP4BQ9H444 224 aaKnown RBP18.36■□□□□ 0.53
CACTIN-203ENST00000429344 KIF13AQ9H1H9 1805 aa18.35■□□□□ 0.53
CACTIN-203ENST00000429344 BAG4O95429 457 aaKnown RBP18.35■□□□□ 0.53
CACTIN-203ENST00000429344 STK31Q9BXU1 1019 aa18.35■□□□□ 0.53
CACTIN-203ENST00000429344 ZBTB7BO15156 539 aaPredicted RBP18.34■□□□□ 0.53
CACTIN-203ENST00000429344 CPSF1Q10570 1443 aaKnown RBP18.34■□□□□ 0.53
CACTIN-203ENST00000429344 GCC1Q96CN9 775 aa18.34■□□□□ 0.53
CACTIN-203ENST00000429344 FAM13BQ9NYF5 915 aa18.34■□□□□ 0.53
CACTIN-203ENST00000429344 R3HCC1Q9Y3T6 440 aaKnown RBP18.34■□□□□ 0.53
CACTIN-203ENST00000429344 DLC1Q96QB1 1528 aa18.34■□□□□ 0.53
CACTIN-203ENST00000429344 SNX21Q969T3 373 aa18.34■□□□□ 0.53
CACTIN-203ENST00000429344 API5Q9BZZ5 524 aaKnown RBP18.33■□□□□ 0.53
CACTIN-203ENST00000429344 TTC21AQ8NDW8 1320 aa18.33■□□□□ 0.52
CACTIN-203ENST00000429344 VAMP4O75379 141 aa18.33■□□□□ 0.52
CACTIN-203ENST00000429344 PNPLA6Q8IY17 1366 aa18.33■□□□□ 0.52
CACTIN-203ENST00000429344 CIZ1Q9ULV3 898 aaPredicted RBP18.32■□□□□ 0.52
CACTIN-203ENST00000429344 CPS1P31327 1500 aa18.32■□□□□ 0.52
CACTIN-203ENST00000429344 PTMAP06454 111 aaKnown RBP18.32■□□□□ 0.52
CACTIN-203ENST00000429344 ALDH1L2Q3SY69 923 aa18.32■□□□□ 0.52
CACTIN-203ENST00000429344 TSHZ3Q63HK5 1081 aa18.32■□□□□ 0.52
CACTIN-203ENST00000429344 KIF2CQ99661 725 aa18.32■□□□□ 0.52
CACTIN-203ENST00000429344 ZGPATQ8N5A5 531 aaKnown RBP18.32■□□□□ 0.52
CACTIN-203ENST00000429344 EYA1Q99502 592 aa18.31■□□□□ 0.52
CACTIN-203ENST00000429344 USP6P35125 1406 aa18.31■□□□□ 0.52
CACTIN-203ENST00000429344 IQSEC2Q5JU85 1478 aa18.31■□□□□ 0.52
CACTIN-203ENST00000429344 SLC4A2P04920 1241 aa18.31■□□□□ 0.52
CACTIN-203ENST00000429344 SIRT2Q8IXJ6 389 aa18.31■□□□□ 0.52
CACTIN-203ENST00000429344 PTPRUQ92729 1446 aa18.31■□□□□ 0.52
CACTIN-203ENST00000429344 MTHFSDQ2M296 383 aaKnown RBP18.3■□□□□ 0.52
CACTIN-203ENST00000429344 EIF2S2P20042 333 aaKnown RBP18.3■□□□□ 0.52
CACTIN-203ENST00000429344 CASC1Q6TDU7 716 aa18.3■□□□□ 0.52
CACTIN-203ENST00000429344 MED14O60244 1454 aa18.3■□□□□ 0.52
CACTIN-203ENST00000429344 CSB-PGBD3P0DP91 1061 aa18.3■□□□□ 0.52
CACTIN-203ENST00000429344 PLCB2Q00722 1185 aa18.3■□□□□ 0.52
CACTIN-203ENST00000429344 MRPL50Q8N5N7 158 aaKnown RBP18.3■□□□□ 0.52
CACTIN-203ENST00000429344 AATKQ6ZMQ8 1374 aa18.29■□□□□ 0.52
CACTIN-203ENST00000429344 GSPT1P15170 499 aaKnown RBP18.29■□□□□ 0.52
CACTIN-203ENST00000429344 ORAI2Q96SN7 254 aa18.29■□□□□ 0.52
CACTIN-203ENST00000429344 CCDC173Q0VFZ6 552 aa18.28■□□□□ 0.52
CACTIN-203ENST00000429344 FLT4P35916 1363 aa18.28■□□□□ 0.52
CACTIN-203ENST00000429344 ATF3P18847 181 aa18.28■□□□□ 0.52
CACTIN-203ENST00000429344 ZNF428Q96B54 188 aa18.28■□□□□ 0.52
CACTIN-203ENST00000429344 ZC3H6P61129 1189 aaKnown RBP18.28■□□□□ 0.52
CACTIN-203ENST00000429344 FKBP5Q13451 457 aaPredicted RBP18.27■□□□□ 0.52
CACTIN-203ENST00000429344 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
CACTIN-203ENST00000429344 DNTTIP2Q5QJE6 756 aaKnown RBP18.27■□□□□ 0.52
CACTIN-203ENST00000429344 ST18O60284 1047 aa18.27■□□□□ 0.52
CACTIN-203ENST00000429344 LRRC7Q96NW7 1537 aa18.27■□□□□ 0.51
CACTIN-203ENST00000429344 RRP9O43818 475 aaKnown RBP18.27■□□□□ 0.51
CACTIN-203ENST00000429344 TECPR2O15040 1411 aa18.26■□□□□ 0.51
CACTIN-203ENST00000429344 SYCE3A1L190 88 aa18.26■□□□□ 0.51
CACTIN-203ENST00000429344 TEFQ10587 303 aa18.26■□□□□ 0.51
CACTIN-203ENST00000429344 ZSCAN30Q86W11 494 aa18.26■□□□□ 0.51
CACTIN-203ENST00000429344 RABEP1Q15276 862 aa18.25■□□□□ 0.51
CACTIN-203ENST00000429344 PLEKHM2Q8IWE5 1019 aa18.25■□□□□ 0.51
CACTIN-203ENST00000429344 USP32Q8NFA0 1604 aa18.25■□□□□ 0.51
CACTIN-203ENST00000429344 TRIM6-TRIM34B2RNG4 842 aa18.25■□□□□ 0.51
CACTIN-203ENST00000429344 PRIM1P49642 420 aaKnown RBP18.25■□□□□ 0.51
CACTIN-203ENST00000429344 NEK4P51957 841 aa18.25■□□□□ 0.51
CACTIN-203ENST00000429344 INTS3Q68E01 1043 aaKnown RBP18.25■□□□□ 0.51
CACTIN-203ENST00000429344 RILPL2Q969X0 211 aa18.25■□□□□ 0.51
CACTIN-203ENST00000429344 PTMSP20962 102 aa18.25■□□□□ 0.51
CACTIN-203ENST00000429344 HOXC9P31274 260 aa18.25■□□□□ 0.51
CACTIN-203ENST00000429344 ZSCAN23Q3MJ62 389 aa18.25■□□□□ 0.51
CACTIN-203ENST00000429344 SHPRHQ149N8 1683 aa18.25■□□□□ 0.51
CACTIN-203ENST00000429344 KLHL40Q2TBA0 621 aa18.24■□□□□ 0.51
CACTIN-203ENST00000429344 CDK12Q9NYV4 1490 aaPredicted RBP18.24■□□□□ 0.51
CACTIN-203ENST00000429344 F6X3S4 739 aa18.24■□□□□ 0.51
CACTIN-203ENST00000429344 ISY1Q9ULR0 285 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms