RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 PCDHB11Q9Y5F2 797 aa11.06□□□□□ -0.64
HMGB1P32-201ENST00000425971 IVNS1ABPQ9Y6Y0 642 aa11.06□□□□□ -0.64
HMGB1P32-201ENST00000425971 INTS6LQ5JSJ4 861 aaKnown RBP11.05□□□□□ -0.64
HMGB1P32-201ENST00000425971 TMCO4Q5TGY1 634 aa11.05□□□□□ -0.64
HMGB1P32-201ENST00000425971 PHLDB3Q6NSJ2 640 aa11.05□□□□□ -0.64
HMGB1P32-201ENST00000425971 GNEQ9Y223 722 aaKnown RBP11.05□□□□□ -0.64
HMGB1P32-201ENST00000425971 ERCC6Q03468 1493 aa11.05□□□□□ -0.64
HMGB1P32-201ENST00000425971 SWI5Q1ZZU3 235 aa11.04□□□□□ -0.64
HMGB1P32-201ENST00000425971 SIRT1Q96EB6 747 aa11.04□□□□□ -0.64
HMGB1P32-201ENST00000425971 PCDHGA11Q9Y5H2 935 aa11.04□□□□□ -0.64
HMGB1P32-201ENST00000425971 SSFA2P28290 1259 aa11.03□□□□□ -0.64
HMGB1P32-201ENST00000425971 USP4Q13107 963 aa11.02□□□□□ -0.65
HMGB1P32-201ENST00000425971 VASH1Q7L8A9 365 aaPredicted RBP11.02□□□□□ -0.65
HMGB1P32-201ENST00000425971 TXNDC2Q86VQ3 553 aa11.01□□□□□ -0.65
HMGB1P32-201ENST00000425971 EHBP1Q8NDI1 1231 aa11.01□□□□□ -0.65
HMGB1P32-201ENST00000425971 EMID1Q96A84 441 aaPredicted RBP11.01□□□□□ -0.65
HMGB1P32-201ENST00000425971 CDK15Q96Q40 435 aa11.01□□□□□ -0.65
HMGB1P32-201ENST00000425971 A0A0G2JS52 829 aa11□□□□□ -0.65
HMGB1P32-201ENST00000425971 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
HMGB1P32-201ENST00000425971 CCDC102BQ68D86 513 aa11□□□□□ -0.65
HMGB1P32-201ENST00000425971 LIAT1Q6ZQX7 453 aa11□□□□□ -0.65
HMGB1P32-201ENST00000425971 MPNDQ8N594 471 aa11□□□□□ -0.65
HMGB1P32-201ENST00000425971 TPCN2Q8NHX9 752 aa11□□□□□ -0.65
HMGB1P32-201ENST00000425971 ERVH48-1M5A8F1 160 aa10.99□□□□□ -0.65
HMGB1P32-201ENST00000425971 SEC13P55735 322 aa10.99□□□□□ -0.65
HMGB1P32-201ENST00000425971 CD2BP2O95400 341 aaKnown RBP10.98□□□□□ -0.65
HMGB1P32-201ENST00000425971 ATP2B4P23634 1241 aa10.98□□□□□ -0.65
HMGB1P32-201ENST00000425971 MFAP1P55081 439 aaKnown RBP10.98□□□□□ -0.65
HMGB1P32-201ENST00000425971 RAB15P59190 212 aa10.98□□□□□ -0.65
HMGB1P32-201ENST00000425971 SFI1A8K8P3 1242 aa10.97□□□□□ -0.65
HMGB1P32-201ENST00000425971 SIAH2O43255 324 aa10.97□□□□□ -0.65
HMGB1P32-201ENST00000425971 GRM5P41594 1212 aa10.97□□□□□ -0.65
HMGB1P32-201ENST00000425971 SCTRP47872 440 aa10.97□□□□□ -0.65
HMGB1P32-201ENST00000425971 ERVK-9P63128 1117 aa10.97□□□□□ -0.65
HMGB1P32-201ENST00000425971 PSME1Q06323 249 aa10.97□□□□□ -0.65
HMGB1P32-201ENST00000425971 MYO15BQ96JP2 1530 aa10.96□□□□□ -0.65
HMGB1P32-201ENST00000425971 MYCP01106 439 aaPredicted RBP10.96□□□□□ -0.65
HMGB1P32-201ENST00000425971 SND1Q7KZF4 910 aaKnown RBP eCLIP10.96□□□□□ -0.65
HMGB1P32-201ENST00000425971 C1orf216Q8TAB5 229 aa10.96□□□□□ -0.65
HMGB1P32-201ENST00000425971 TLL2Q9Y6L7 1015 aa10.96□□□□□ -0.65
HMGB1P32-201ENST00000425971 FSHRP23945 695 aa10.95□□□□□ -0.66
HMGB1P32-201ENST00000425971 OCLNQ16625 522 aa10.95□□□□□ -0.66
HMGB1P32-201ENST00000425971 RBM19Q9Y4C8 960 aaKnown RBP10.95□□□□□ -0.66
HMGB1P32-201ENST00000425971 M0R2N6 131 aa10.94□□□□□ -0.66
HMGB1P32-201ENST00000425971 ARID4AP29374 1257 aaPredicted RBP10.94□□□□□ -0.66
HMGB1P32-201ENST00000425971 ARID5BQ14865 1188 aa10.94□□□□□ -0.66
HMGB1P32-201ENST00000425971 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
HMGB1P32-201ENST00000425971 RGS22Q8NE09 1264 aa10.94□□□□□ -0.66
HMGB1P32-201ENST00000425971 CCER1Q8TC90 406 aaPredicted RBP10.94□□□□□ -0.66
HMGB1P32-201ENST00000425971 WNT7AO00755 349 aa10.93□□□□□ -0.66
HMGB1P32-201ENST00000425971 OSBPL3Q9H4L5 887 aa10.93□□□□□ -0.66
HMGB1P32-201ENST00000425971 ADH1CP00326 375 aa10.92□□□□□ -0.66
HMGB1P32-201ENST00000425971 DHX9Q08211 1270 aaKnown RBP10.92□□□□□ -0.66
HMGB1P32-201ENST00000425971 CXXC1Q9P0U4 656 aaPredicted RBP10.92□□□□□ -0.66
HMGB1P32-201ENST00000425971 PRMT3O60678 531 aa10.91□□□□□ -0.66
HMGB1P32-201ENST00000425971 TMPRSS4Q9NRS4 437 aa10.91□□□□□ -0.66
HMGB1P32-201ENST00000425971 TMEM229AB2RXF0 380 aa10.9□□□□□ -0.66
HMGB1P32-201ENST00000425971 SLC19A1P41440 591 aa10.9□□□□□ -0.66
HMGB1P32-201ENST00000425971 NR5A1Q13285 461 aa10.9□□□□□ -0.66
HMGB1P32-201ENST00000425971 TAS1R3Q7RTX0 852 aa10.9□□□□□ -0.66
HMGB1P32-201ENST00000425971 ZNF784Q8NCA9 323 aaPredicted RBP10.9□□□□□ -0.66
HMGB1P32-201ENST00000425971 ZNF358Q9NW07 568 aa10.9□□□□□ -0.66
HMGB1P32-201ENST00000425971 WASLO00401 505 aaPredicted RBP10.89□□□□□ -0.67
HMGB1P32-201ENST00000425971 LILRA1O75019 489 aa10.89□□□□□ -0.67
HMGB1P32-201ENST00000425971 SCNN1DP51172 638 aa10.89□□□□□ -0.67
HMGB1P32-201ENST00000425971 CCDC116Q8IYX3 515 aa10.89□□□□□ -0.67
HMGB1P32-201ENST00000425971 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.89□□□□□ -0.67
HMGB1P32-201ENST00000425971 TRIM52Q96A61 297 aa10.89□□□□□ -0.67
HMGB1P32-201ENST00000425971 MRGPRX2Q96LB1 330 aa10.89□□□□□ -0.67
HMGB1P32-201ENST00000425971 PRIMPOLQ96LW4 560 aa10.89□□□□□ -0.67
HMGB1P32-201ENST00000425971 CYLDQ9NQC7 956 aa10.89□□□□□ -0.67
HMGB1P32-201ENST00000425971 WEE1P30291 646 aa10.88□□□□□ -0.67
HMGB1P32-201ENST00000425971 CCDC27Q2M243 656 aa10.88□□□□□ -0.67
HMGB1P32-201ENST00000425971 PPP1R26Q5T8A7 1209 aaPredicted RBP10.88□□□□□ -0.67
HMGB1P32-201ENST00000425971 SPRYD7Q5W111 196 aa10.88□□□□□ -0.67
HMGB1P32-201ENST00000425971 TSEN2Q8NCE0 465 aaKnown RBP10.88□□□□□ -0.67
HMGB1P32-201ENST00000425971 MTMR7Q9Y216 660 aa10.88□□□□□ -0.67
HMGB1P32-201ENST00000425971 NR3C2P08235 984 aa10.87□□□□□ -0.67
HMGB1P32-201ENST00000425971 SCNN1AP37088 669 aa10.87□□□□□ -0.67
HMGB1P32-201ENST00000425971 SERPINB4P48594 390 aa10.87□□□□□ -0.67
HMGB1P32-201ENST00000425971 NPM2Q86SE8 214 aaKnown RBP10.87□□□□□ -0.67
HMGB1P32-201ENST00000425971 SCRIBQ14160 1630 aa10.85□□□□□ -0.67
HMGB1P32-201ENST00000425971 LGR5O75473 907 aa10.85□□□□□ -0.67
HMGB1P32-201ENST00000425971 GDF10P55107 478 aa10.85□□□□□ -0.67
HMGB1P32-201ENST00000425971 MYT1Q01538 1121 aa10.85□□□□□ -0.67
HMGB1P32-201ENST00000425971 HINFPQ9BQA5 517 aa10.85□□□□□ -0.67
HMGB1P32-201ENST00000425971 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
HMGB1P32-201ENST00000425971 SOWAHDA6NJG2 315 aa10.84□□□□□ -0.67
HMGB1P32-201ENST00000425971 RGS20O76081 388 aa10.84□□□□□ -0.67
HMGB1P32-201ENST00000425971 STAU1O95793 577 aaKnown RBP10.84□□□□□ -0.67
HMGB1P32-201ENST00000425971 EPHA4P54764 986 aa10.84□□□□□ -0.67
HMGB1P32-201ENST00000425971 CYP2U1Q7Z449 544 aa10.84□□□□□ -0.67
HMGB1P32-201ENST00000425971 ETNK1Q9HBU6 452 aa10.84□□□□□ -0.67
HMGB1P32-201ENST00000425971 ADD1P35611 737 aaKnown RBP10.83□□□□□ -0.68
HMGB1P32-201ENST00000425971 GNRH1P01148 92 aa10.82□□□□□ -0.68
HMGB1P32-201ENST00000425971 INHAP05111 366 aa10.82□□□□□ -0.68
HMGB1P32-201ENST00000425971 IGFBP4P22692 258 aa10.82□□□□□ -0.68
HMGB1P32-201ENST00000425971 FKBP5Q13451 457 aaPredicted RBP10.82□□□□□ -0.68
HMGB1P32-201ENST00000425971 ZNF697Q5TEC3 545 aa10.82□□□□□ -0.68
HMGB1P32-201ENST00000425971 EMILIN1Q9Y6C2 1016 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms