RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 PDIA6Q15084 440 aa6.55□□□□□ -1.36
CNGA1-203ENST00000420489 NOS1P29475 1434 aa6.54□□□□□ -1.36
CNGA1-203ENST00000420489 ADGRL3Q9HAR2 1447 aa6.54□□□□□ -1.36
CNGA1-203ENST00000420489 LMTK2Q8IWU2 1503 aa6.54□□□□□ -1.36
CNGA1-203ENST00000420489 GOLGA8CPA6NN73 597 aa6.54□□□□□ -1.36
CNGA1-203ENST00000420489 DPYSL4O14531 572 aa6.54□□□□□ -1.36
CNGA1-203ENST00000420489 PLSCR1O15162 318 aa6.54□□□□□ -1.36
CNGA1-203ENST00000420489 FHDC1Q9C0D6 1143 aaPredicted RBP6.54□□□□□ -1.36
CNGA1-203ENST00000420489 PCDHGA10Q9Y5H3 936 aa6.54□□□□□ -1.36
CNGA1-203ENST00000420489 CEP152O94986 1710 aa6.54□□□□□ -1.36
CNGA1-203ENST00000420489 TNRC6CQ9HCJ0 1690 aaKnown RBP6.54□□□□□ -1.36
CNGA1-203ENST00000420489 HFM1A2PYH4 1435 aa6.53□□□□□ -1.36
CNGA1-203ENST00000420489 LRPPRCP42704 1394 aaKnown RBP6.53□□□□□ -1.36
CNGA1-203ENST00000420489 MTUS2Q5JR59 1369 aa6.53□□□□□ -1.36
CNGA1-203ENST00000420489 COL14A1Q05707 1796 aaKnown RBP6.53□□□□□ -1.36
CNGA1-203ENST00000420489 DLL1O00548 723 aa6.53□□□□□ -1.36
CNGA1-203ENST00000420489 LAPTM4BQ86VI4 370 aa6.53□□□□□ -1.36
CNGA1-203ENST00000420489 ZBED2Q9BTP6 218 aa6.53□□□□□ -1.36
CNGA1-203ENST00000420489 ADAM33Q9BZ11 813 aa6.53□□□□□ -1.36
CNGA1-203ENST00000420489 FBXO31Q5XUX0 539 aaPredicted RBP6.53□□□□□ -1.36
CNGA1-203ENST00000420489 ZFYVE9O95405 1425 aa6.52□□□□□ -1.37
CNGA1-203ENST00000420489 SLC16A10Q8TF71 515 aa6.52□□□□□ -1.37
CNGA1-203ENST00000420489 KIF1AQ12756 1690 aa6.52□□□□□ -1.37
CNGA1-203ENST00000420489 KIF15Q9NS87 1388 aa6.52□□□□□ -1.37
CNGA1-203ENST00000420489 PXDNQ92626 1479 aa6.52□□□□□ -1.37
CNGA1-203ENST00000420489 GPR162Q16538 588 aa6.52□□□□□ -1.37
CNGA1-203ENST00000420489 THSD7BQ9C0I4 1608 aa6.51□□□□□ -1.37
CNGA1-203ENST00000420489 MRPL50Q8N5N7 158 aaKnown RBP6.51□□□□□ -1.37
CNGA1-203ENST00000420489 C1orf167Q5SNV9 1468 aa6.51□□□□□ -1.37
CNGA1-203ENST00000420489 RSPH4AQ5TD94 716 aa6.5□□□□□ -1.37
CNGA1-203ENST00000420489 ARXQ96QS3 562 aa6.5□□□□□ -1.37
CNGA1-203ENST00000420489 RABGEF1Q9UJ41 708 aa6.5□□□□□ -1.37
CNGA1-203ENST00000420489 CCDC18Q5T9S5 1454 aa6.5□□□□□ -1.37
CNGA1-203ENST00000420489 BHMG1C9JSJ3 638 aaPredicted RBP6.5□□□□□ -1.37
CNGA1-203ENST00000420489 WASHC2CQ9Y4E1 1318 aa6.5□□□□□ -1.37
CNGA1-203ENST00000420489 PLEKHG2Q9H7P9 1386 aa6.49□□□□□ -1.37
CNGA1-203ENST00000420489 GGT6Q6P531 493 aa6.49□□□□□ -1.37
CNGA1-203ENST00000420489 P3H3Q8IVL6 736 aa6.49□□□□□ -1.37
CNGA1-203ENST00000420489 C6orf132Q5T0Z8 1188 aa6.49□□□□□ -1.37
CNGA1-203ENST00000420489 ARHGEF1Q92888 912 aaKnown RBP6.49□□□□□ -1.37
CNGA1-203ENST00000420489 PAPPAQ13219 1627 aa6.49□□□□□ -1.37
CNGA1-203ENST00000420489 ADAMTS2O95450 1211 aa6.48□□□□□ -1.37
CNGA1-203ENST00000420489 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.48□□□□□ -1.37
CNGA1-203ENST00000420489 VIRMAQ69YN4 1812 aaKnown RBP6.48□□□□□ -1.37
CNGA1-203ENST00000420489 PEAK1Q9H792 1746 aa6.48□□□□□ -1.37
CNGA1-203ENST00000420489 NBR1Q14596 966 aa6.47□□□□□ -1.37
CNGA1-203ENST00000420489 PACS2Q86VP3 889 aa6.47□□□□□ -1.37
CNGA1-203ENST00000420489 PARP4Q9UKK3 1724 aaKnown RBP6.46□□□□□ -1.37
CNGA1-203ENST00000420489 NYAP1Q6ZVC0 841 aa6.46□□□□□ -1.38
CNGA1-203ENST00000420489 ANKK1Q8NFD2 765 aa6.46□□□□□ -1.38
CNGA1-203ENST00000420489 TOPAZ1Q8N9V7 1692 aa6.46□□□□□ -1.38
CNGA1-203ENST00000420489 KCTD12Q96CX2 325 aaKnown RBP6.46□□□□□ -1.38
CNGA1-203ENST00000420489 MBD5Q9P267 1494 aa6.45□□□□□ -1.38
CNGA1-203ENST00000420489 TRIM6-TRIM34B2RNG4 842 aa6.45□□□□□ -1.38
CNGA1-203ENST00000420489 WNT2BQ93097 391 aa6.45□□□□□ -1.38
CNGA1-203ENST00000420489 NPHP3Q7Z494 1330 aa6.45□□□□□ -1.38
CNGA1-203ENST00000420489 NRXN3Q9Y4C0 1643 aa6.45□□□□□ -1.38
CNGA1-203ENST00000420489 APBA3O96018 575 aa6.45□□□□□ -1.38
CNGA1-203ENST00000420489 HMGB2P26583 209 aaKnown RBP6.45□□□□□ -1.38
CNGA1-203ENST00000420489 RBM27Q9P2N5 1060 aaKnown RBP6.45□□□□□ -1.38
CNGA1-203ENST00000420489 ADAMTS13Q76LX8 1427 aa6.45□□□□□ -1.38
CNGA1-203ENST00000420489 CDC42BPGQ6DT37 1551 aa6.45□□□□□ -1.38
CNGA1-203ENST00000420489 IQGAP3Q86VI3 1631 aa6.45□□□□□ -1.38
CNGA1-203ENST00000420489 MAP3K7O43318 606 aa6.44□□□□□ -1.38
CNGA1-203ENST00000420489 DDX12PQ92771 950 aa6.44□□□□□ -1.38
CNGA1-203ENST00000420489 AIDAQ96BJ3 306 aa6.44□□□□□ -1.38
CNGA1-203ENST00000420489 SMC1BQ8NDV3 1235 aa6.43□□□□□ -1.38
CNGA1-203ENST00000420489 NECTIN2Q92692 538 aa6.43□□□□□ -1.38
CNGA1-203ENST00000420489 TSHZ2Q9NRE2 1034 aa6.43□□□□□ -1.38
CNGA1-203ENST00000420489 DUOX2Q9NRD8 1548 aa6.43□□□□□ -1.38
CNGA1-203ENST00000420489 COL9A1P20849 921 aa6.43□□□□□ -1.38
CNGA1-203ENST00000420489 THSD4Q6ZMP0 1018 aa6.43□□□□□ -1.38
CNGA1-203ENST00000420489 PLCB2Q00722 1185 aa6.42□□□□□ -1.38
CNGA1-203ENST00000420489 STK32BQ9NY57 414 aa6.42□□□□□ -1.38
CNGA1-203ENST00000420489 SPATA31A5Q5VU36 1347 aa6.42□□□□□ -1.38
CNGA1-203ENST00000420489 SPATA31A7Q8IWB4 1347 aa6.42□□□□□ -1.38
CNGA1-203ENST00000420489 ZC3H4Q9UPT8 1303 aaKnown RBP6.42□□□□□ -1.38
CNGA1-203ENST00000420489 RGS20O76081 388 aa6.42□□□□□ -1.38
CNGA1-203ENST00000420489 PLA2G2EQ9NZK7 142 aa6.42□□□□□ -1.38
CNGA1-203ENST00000420489 KIAA1468Q9P260 1216 aa6.42□□□□□ -1.38
CNGA1-203ENST00000420489 ATP7BP35670 1465 aa6.42□□□□□ -1.38
CNGA1-203ENST00000420489 FAM98CQ17RN3 349 aaKnown RBP6.41□□□□□ -1.38
CNGA1-203ENST00000420489 NBPF26B4DH59 902 aa6.41□□□□□ -1.38
CNGA1-203ENST00000420489 BARGINQ6ZT62 677 aa6.41□□□□□ -1.38
CNGA1-203ENST00000420489 SLC52A1Q9NWF4 448 aa6.41□□□□□ -1.38
CNGA1-203ENST00000420489 MEGF6O75095 1541 aa6.41□□□□□ -1.38
CNGA1-203ENST00000420489 PRSS12P56730 875 aa6.41□□□□□ -1.38
CNGA1-203ENST00000420489 SBNO1A3KN83 1393 aa6.4□□□□□ -1.38
CNGA1-203ENST00000420489 SBF2Q86WG5 1849 aa6.4□□□□□ -1.38
CNGA1-203ENST00000420489 SYNGAP1Q96PV0 1343 aa6.4□□□□□ -1.38
CNGA1-203ENST00000420489 CCDC144AA2RUR9 1427 aa6.4□□□□□ -1.38
CNGA1-203ENST00000420489 GRXCR2A6NFK2 248 aa6.4□□□□□ -1.38
CNGA1-203ENST00000420489 HABP4Q5JVS0 413 aaKnown RBP6.4□□□□□ -1.38
CNGA1-203ENST00000420489 SMYD5Q6GMV2 418 aa6.4□□□□□ -1.39
CNGA1-203ENST00000420489 LRRIQ1Q96JM4 1722 aa6.39□□□□□ -1.39
CNGA1-203ENST00000420489 CCDC141Q6ZP82 1450 aa6.39□□□□□ -1.39
CNGA1-203ENST00000420489 TRPM1Q7Z4N2 1603 aa6.39□□□□□ -1.39
CNGA1-203ENST00000420489 POLD1P28340 1107 aa6.39□□□□□ -1.39
CNGA1-203ENST00000420489 CD2APQ9Y5K6 639 aa6.39□□□□□ -1.39
CNGA1-203ENST00000420489 PKD1L3Q7Z443 1732 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms