RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 EYA1Q99502 592 aa19.38■□□□□ 0.69
SEC24D-202ENST00000419654 XPCQ01831 940 aaPredicted RBP19.38■□□□□ 0.69
SEC24D-202ENST00000419654 KRT28Q7Z3Y7 464 aa19.38■□□□□ 0.69
SEC24D-202ENST00000419654 RWDD1Q9H446 243 aaPredicted RBP19.38■□□□□ 0.69
SEC24D-202ENST00000419654 CADPS2Q86UW7 1296 aa19.37■□□□□ 0.69
SEC24D-202ENST00000419654 ALS2Q96Q42 1657 aa19.37■□□□□ 0.69
SEC24D-202ENST00000419654 ELL2O00472 640 aaPredicted RBP19.36■□□□□ 0.69
SEC24D-202ENST00000419654 ZNF853P0CG23 659 aa19.36■□□□□ 0.69
SEC24D-202ENST00000419654 IFT57Q9NWB7 429 aa19.36■□□□□ 0.69
SEC24D-202ENST00000419654 IP6K1Q92551 441 aa19.36■□□□□ 0.69
SEC24D-202ENST00000419654 MSH6P52701 1360 aa19.36■□□□□ 0.69
SEC24D-202ENST00000419654 GSE1Q14687 1217 aa19.35■□□□□ 0.69
SEC24D-202ENST00000419654 TMEM57Q8N5G2 664 aa19.35■□□□□ 0.69
SEC24D-202ENST00000419654 GNAI1P63096 354 aa19.34■□□□□ 0.69
SEC24D-202ENST00000419654 FAM83GA6ND36 823 aa19.33■□□□□ 0.68
SEC24D-202ENST00000419654 GCP02774 474 aa19.33■□□□□ 0.68
SEC24D-202ENST00000419654 BRPF3Q9ULD4 1205 aa19.33■□□□□ 0.68
SEC24D-202ENST00000419654 CFAP44Q96MT7 982 aa19.32■□□□□ 0.68
SEC24D-202ENST00000419654 ATF7IPQ6VMQ6 1270 aa19.32■□□□□ 0.68
SEC24D-202ENST00000419654 MFAP1P55081 439 aaKnown RBP19.31■□□□□ 0.68
SEC24D-202ENST00000419654 ARHGEF25Q86VW2 580 aa19.31■□□□□ 0.68
SEC24D-202ENST00000419654 DCTN1Q14203 1278 aa19.3■□□□□ 0.68
SEC24D-202ENST00000419654 ZNF335Q9H4Z2 1342 aaPredicted RBP19.3■□□□□ 0.68
SEC24D-202ENST00000419654 MTHFSDQ2M296 383 aaKnown RBP19.3■□□□□ 0.68
SEC24D-202ENST00000419654 MBIPQ9NS73 344 aa19.3■□□□□ 0.68
SEC24D-202ENST00000419654 C1orf115Q9H7X2 142 aa19.29■□□□□ 0.68
SEC24D-202ENST00000419654 UPF2Q9HAU5 1272 aaKnown RBP19.29■□□□□ 0.68
SEC24D-202ENST00000419654 VIRMAQ69YN4 1812 aaKnown RBP19.29■□□□□ 0.68
SEC24D-202ENST00000419654 LMOD2Q6P5Q4 547 aa19.29■□□□□ 0.68
SEC24D-202ENST00000419654 ZNF428Q96B54 188 aa19.29■□□□□ 0.68
SEC24D-202ENST00000419654 NPHP3Q7Z494 1330 aa19.29■□□□□ 0.68
SEC24D-202ENST00000419654 MED1Q15648 1581 aaPredicted RBP19.29■□□□□ 0.68
SEC24D-202ENST00000419654 LTV1Q96GA3 475 aaPredicted RBP19.28■□□□□ 0.68
SEC24D-202ENST00000419654 PXDNQ92626 1479 aa19.28■□□□□ 0.68
SEC24D-202ENST00000419654 ALDH1L2Q3SY69 923 aa19.27■□□□□ 0.68
SEC24D-202ENST00000419654 TSPYL6Q8N831 410 aa19.27■□□□□ 0.68
SEC24D-202ENST00000419654 GAS2L2Q8NHY3 880 aa19.27■□□□□ 0.68
SEC24D-202ENST00000419654 DDX17Q92841 729 aaKnown RBP19.27■□□□□ 0.68
SEC24D-202ENST00000419654 DDX19BQ9UMR2 479 aa19.27■□□□□ 0.67
SEC24D-202ENST00000419654 CRB1P82279 1406 aa19.26■□□□□ 0.67
SEC24D-202ENST00000419654 BECN1Q14457 450 aa19.26■□□□□ 0.67
SEC24D-202ENST00000419654 LNPKQ9C0E8 428 aa19.26■□□□□ 0.67
SEC24D-202ENST00000419654 MCM10Q7L590 875 aa19.26■□□□□ 0.67
SEC24D-202ENST00000419654 TBC1D32Q96NH3 1257 aa19.26■□□□□ 0.67
SEC24D-202ENST00000419654 VAMP4O75379 141 aa19.25■□□□□ 0.67
SEC24D-202ENST00000419654 ARXQ96QS3 562 aa19.25■□□□□ 0.67
SEC24D-202ENST00000419654 TBC1D2Q9BYX2 928 aa19.25■□□□□ 0.67
SEC24D-202ENST00000419654 RGPD2P0DJD1 1756 aa19.25■□□□□ 0.67
SEC24D-202ENST00000419654 CHL1O00533 1208 aa19.25■□□□□ 0.67
SEC24D-202ENST00000419654 BRPF1P55201 1214 aaPredicted RBP19.25■□□□□ 0.67
SEC24D-202ENST00000419654 TNS3Q68CZ2 1445 aa19.24■□□□□ 0.67
SEC24D-202ENST00000419654 NBPF6Q5VWK0 638 aa19.24■□□□□ 0.67
SEC24D-202ENST00000419654 NBPF4Q96M43 638 aa19.24■□□□□ 0.67
SEC24D-202ENST00000419654 HTATSF1O43719 755 aaKnown RBP19.24■□□□□ 0.67
SEC24D-202ENST00000419654 NCAPD2Q15021 1401 aa19.24■□□□□ 0.67
SEC24D-202ENST00000419654 LRRC37A3O60309 1634 aa19.23■□□□□ 0.67
SEC24D-202ENST00000419654 ZBTB7CA1YPR0 619 aa19.23■□□□□ 0.67
SEC24D-202ENST00000419654 BRINP3Q76B58 766 aa19.23■□□□□ 0.67
SEC24D-202ENST00000419654 AAMPQ13685 434 aa19.22■□□□□ 0.67
SEC24D-202ENST00000419654 USHBP1Q8N6Y0 703 aa19.22■□□□□ 0.67
SEC24D-202ENST00000419654 CAMTA1Q9Y6Y1 1673 aa19.22■□□□□ 0.67
SEC24D-202ENST00000419654 CRYBG1Q9Y4K1 1723 aa19.22■□□□□ 0.67
SEC24D-202ENST00000419654 ZBTB40Q9NUA8 1239 aa19.22■□□□□ 0.67
SEC24D-202ENST00000419654 KIF16BQ96L93 1317 aa19.22■□□□□ 0.67
SEC24D-202ENST00000419654 SPATA31A3Q5VYP0 1347 aa19.21■□□□□ 0.67
SEC24D-202ENST00000419654 C8orf58Q8NAV2 365 aa19.21■□□□□ 0.67
SEC24D-202ENST00000419654 RTF1Q92541 710 aaKnown RBP19.21■□□□□ 0.67
SEC24D-202ENST00000419654 TWISTNBQ3B726 338 aaPredicted RBP19.21■□□□□ 0.67
SEC24D-202ENST00000419654 PLEKHG5O94827 1062 aa19.2■□□□□ 0.66
SEC24D-202ENST00000419654 SLAIN2Q9P270 581 aa19.2■□□□□ 0.66
SEC24D-202ENST00000419654 AXIN2Q9Y2T1 843 aa19.2■□□□□ 0.66
SEC24D-202ENST00000419654 RGPD5Q99666 1765 aa19.2■□□□□ 0.66
SEC24D-202ENST00000419654 GNAT3A8MTJ3 354 aa19.2■□□□□ 0.66
SEC24D-202ENST00000419654 C22orf23Q9BZE7 217 aa19.2■□□□□ 0.66
SEC24D-202ENST00000419654 KIAA0232Q92628 1395 aa19.19■□□□□ 0.66
SEC24D-202ENST00000419654 MAP3K5Q99683 1374 aa19.19■□□□□ 0.66
SEC24D-202ENST00000419654 IPO8O15397 1037 aaKnown RBP19.19■□□□□ 0.66
SEC24D-202ENST00000419654 HDAC1Q13547 482 aaPredicted RBP19.19■□□□□ 0.66
SEC24D-202ENST00000419654 ANKRD24Q8TF21 1146 aa19.19■□□□□ 0.66
SEC24D-202ENST00000419654 LRRC59Q96AG4 307 aaKnown RBP19.19■□□□□ 0.66
SEC24D-202ENST00000419654 MRPL50Q8N5N7 158 aaKnown RBP19.18■□□□□ 0.66
SEC24D-202ENST00000419654 COL18A1P39060 1754 aa19.18■□□□□ 0.66
SEC24D-202ENST00000419654 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
SEC24D-202ENST00000419654 ZC3H6P61129 1189 aaKnown RBP19.17■□□□□ 0.66
SEC24D-202ENST00000419654 ABCC6O95255 1503 aa19.16■□□□□ 0.66
SEC24D-202ENST00000419654 ANKRD45Q5TZF3 282 aa19.16■□□□□ 0.66
SEC24D-202ENST00000419654 SMC5Q8IY18 1101 aa19.16■□□□□ 0.66
SEC24D-202ENST00000419654 ANTXR1Q9H6X2 564 aa19.15■□□□□ 0.66
SEC24D-202ENST00000419654 SOS2Q07890 1332 aaPredicted RBP19.15■□□□□ 0.66
SEC24D-202ENST00000419654 KRT24Q2M2I5 525 aa19.15■□□□□ 0.66
SEC24D-202ENST00000419654 ARHGAP45Q92619 1136 aa19.15■□□□□ 0.66
SEC24D-202ENST00000419654 ERBB3P21860 1342 aa19.15■□□□□ 0.66
SEC24D-202ENST00000419654 IL17REQ8NFR9 667 aa19.15■□□□□ 0.66
SEC24D-202ENST00000419654 HAP1P54257 671 aaPredicted RBP19.14■□□□□ 0.65
SEC24D-202ENST00000419654 CABLES1Q8TDN4 633 aa19.14■□□□□ 0.65
SEC24D-202ENST00000419654 CPDO75976 1380 aa19.13■□□□□ 0.65
SEC24D-202ENST00000419654 TSPYL4Q9UJ04 414 aa19.13■□□□□ 0.65
SEC24D-202ENST00000419654 CHD1LQ86WJ1 897 aa19.12■□□□□ 0.65
SEC24D-202ENST00000419654 GZF1Q9H116 711 aaPredicted RBP19.12■□□□□ 0.65
SEC24D-202ENST00000419654 MIS18AQ9NYP9 233 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms