RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 RAB3GAP1Q15042 981 aa5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 SNRKQ9NRH2 765 aa5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 DDX19BQ9UMR2 479 aa5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 TRAK1Q9UPV9 953 aa5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 TNRQ92752 1358 aa5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 MYH3P11055 1940 aa5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 PLEKHG5O94827 1062 aa5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 ZKSCAN2Q63HK3 967 aa5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 CFAP44Q96MT7 982 aa5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 CIZ1Q9ULV3 898 aaPredicted RBP5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 GSPT1P15170 499 aaKnown RBP5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 MORC1Q86VD1 984 aa5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 FAM43AQ8N2R8 423 aa5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 BABAM1Q9NWV8 329 aa5.72□□□□□ -1.49
GPCPD1-202ENST00000418646 DZIP1LQ8IYY4 767 aaKnown RBP5.71□□□□□ -1.49
GPCPD1-202ENST00000418646 FRAT1Q92837 279 aaPredicted RBP5.71□□□□□ -1.49
GPCPD1-202ENST00000418646 PHACTR3Q96KR7 559 aa5.71□□□□□ -1.49
GPCPD1-202ENST00000418646 PRAM1Q96QH2 718 aa5.71□□□□□ -1.5
GPCPD1-202ENST00000418646 CDK19Q9BWU1 502 aa5.71□□□□□ -1.5
GPCPD1-202ENST00000418646 CABP2Q9NPB3 220 aa5.71□□□□□ -1.5
GPCPD1-202ENST00000418646 COG6Q9Y2V7 657 aa5.71□□□□□ -1.5
GPCPD1-202ENST00000418646 TIAM2Q8IVF5 1701 aa5.71□□□□□ -1.5
GPCPD1-202ENST00000418646 DCTPP1Q9H773 170 aa5.71□□□□□ -1.5
GPCPD1-202ENST00000418646 SETD1BQ9UPS6 1966 aaKnown RBP5.71□□□□□ -1.5
GPCPD1-202ENST00000418646 ITGB4P16144 1822 aa5.71□□□□□ -1.5
GPCPD1-202ENST00000418646 TTC21AQ8NDW8 1320 aa5.71□□□□□ -1.5
GPCPD1-202ENST00000418646 COL5A3P25940 1745 aaPredicted RBP5.71□□□□□ -1.5
GPCPD1-202ENST00000418646 TMEM57Q8N5G2 664 aa5.71□□□□□ -1.5
GPCPD1-202ENST00000418646 GCC1Q96CN9 775 aa5.71□□□□□ -1.5
GPCPD1-202ENST00000418646 AKAP11Q9UKA4 1901 aa5.7□□□□□ -1.5
GPCPD1-202ENST00000418646 TTC21BQ7Z4L5 1316 aa5.7□□□□□ -1.5
GPCPD1-202ENST00000418646 FRAT2O75474 233 aaPredicted RBP5.7□□□□□ -1.5
GPCPD1-202ENST00000418646 EXOSC9Q06265 439 aaKnown RBP5.7□□□□□ -1.5
GPCPD1-202ENST00000418646 FBXO41Q8TF61 875 aa5.7□□□□□ -1.5
GPCPD1-202ENST00000418646 KCNB2Q92953 911 aa5.7□□□□□ -1.5
GPCPD1-202ENST00000418646 CHD4Q14839 1912 aa5.7□□□□□ -1.5
GPCPD1-202ENST00000418646 NRAPQ86VF7 1730 aa5.7□□□□□ -1.5
GPCPD1-202ENST00000418646 CD2BP2O95400 341 aaKnown RBP5.7□□□□□ -1.5
GPCPD1-202ENST00000418646 MBIPQ9NS73 344 aa5.7□□□□□ -1.5
GPCPD1-202ENST00000418646 PTPRCP08575 1304 aa5.69□□□□□ -1.5
GPCPD1-202ENST00000418646 AOX1Q06278 1338 aa5.69□□□□□ -1.5
GPCPD1-202ENST00000418646 FBXO31Q5XUX0 539 aaPredicted RBP5.69□□□□□ -1.5
GPCPD1-202ENST00000418646 PDLIM2Q96JY6 352 aa5.69□□□□□ -1.5
GPCPD1-202ENST00000418646 KCPQ6ZWJ8 1503 aa5.69□□□□□ -1.5
GPCPD1-202ENST00000418646 PXDNQ92626 1479 aa5.69□□□□□ -1.5
GPCPD1-202ENST00000418646 PPP1R9BQ96SB3 815 aa5.69□□□□□ -1.5
GPCPD1-202ENST00000418646 TERF2IPQ9NYB0 399 aa5.69□□□□□ -1.5
GPCPD1-202ENST00000418646 HTATSF1O43719 755 aaKnown RBP5.69□□□□□ -1.5
GPCPD1-202ENST00000418646 NOB1Q9ULX3 412 aaKnown RBP5.69□□□□□ -1.5
GPCPD1-202ENST00000418646 RWDD1Q9H446 243 aaPredicted RBP5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 DCCP43146 1447 aa5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 RPAP1Q9BWH6 1393 aaPredicted RBP5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 DIAPH1O60610 1272 aaKnown RBP5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 NEFMP07197 916 aa5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 CHD1LQ86WJ1 897 aa5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 PLEKHM2Q8IWE5 1019 aa5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 TSPYL6Q8N831 410 aa5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 TSR2Q969E8 191 aaKnown RBP5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 STAP2Q9UGK3 403 aa5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 FLT4P35916 1363 aa5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 ANKRD44Q8N8A2 993 aa5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 ZNF646O15015 1829 aaPredicted RBP5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 UTYO14607 1347 aa5.68□□□□□ -1.5
GPCPD1-202ENST00000418646 MCM4P33991 863 aa5.67□□□□□ -1.5
GPCPD1-202ENST00000418646 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.67□□□□□ -1.5
GPCPD1-202ENST00000418646 CUL4AQ13619 759 aa5.67□□□□□ -1.5
GPCPD1-202ENST00000418646 CFAP53Q96M91 514 aa5.67□□□□□ -1.5
GPCPD1-202ENST00000418646 PNNQ9H307 717 aaKnown RBP5.67□□□□□ -1.5
GPCPD1-202ENST00000418646 ZDHHC9Q9Y397 364 aa5.67□□□□□ -1.5
GPCPD1-202ENST00000418646 CABP1Q9NZU7 370 aa5.66□□□□□ -1.5
GPCPD1-202ENST00000418646 POGKQ9P215 609 aa5.66□□□□□ -1.5
GPCPD1-202ENST00000418646 ZNF445P59923 1031 aa5.66□□□□□ -1.5
GPCPD1-202ENST00000418646 CALD1Q05682 793 aaKnown RBP5.66□□□□□ -1.5
GPCPD1-202ENST00000418646 EIF4A2Q14240 407 aaKnown RBP5.66□□□□□ -1.5
GPCPD1-202ENST00000418646 COL24A1Q17RW2 1714 aa5.66□□□□□ -1.5
GPCPD1-202ENST00000418646 XRCC6P12956 609 aaKnown RBP eCLIP5.66□□□□□ -1.52e-6■■■■□ 25.1
GPCPD1-202ENST00000418646 CLCN1P35523 988 aa5.66□□□□□ -1.5
GPCPD1-202ENST00000418646 POLA2Q14181 598 aa5.66□□□□□ -1.5
GPCPD1-202ENST00000418646 CEP85Q6P2H3 762 aa5.66□□□□□ -1.5
GPCPD1-202ENST00000418646 C8orf58Q8NAV2 365 aa5.66□□□□□ -1.5
GPCPD1-202ENST00000418646 TMEM87AQ8NBN3 555 aa5.66□□□□□ -1.5
GPCPD1-202ENST00000418646 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.66□□□□□ -1.5
GPCPD1-202ENST00000418646 NPHP4O75161 1426 aaPredicted RBP5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 SCN7AQ01118 1682 aa5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 COL16A1Q07092 1604 aaPredicted RBP5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 DDX60LQ5H9U9 1706 aaKnown RBP5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 PLPPR3Q6T4P5 718 aa5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 USP26Q9BXU7 913 aa5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 GGNBP2Q9H3C7 697 aa5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 RRAGDQ9NQL2 400 aaPredicted RBP5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 TBX22Q9Y458 520 aa5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 TNS2Q63HR2 1409 aa5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 ERBB4Q15303 1308 aa5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 MTX1Q13505 466 aa5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 TTC22Q5TAA0 569 aa5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 C22orf23Q9BZE7 217 aa5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 CCDC61Q9Y6R9 512 aa5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 MYO5AQ9Y4I1 1855 aaKnown RBP5.65□□□□□ -1.5
GPCPD1-202ENST00000418646 GNAI1P63096 354 aa5.65□□□□□ -1.51
GPCPD1-202ENST00000418646 TBC1D9Q6ZT07 1266 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms