RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 NISCHQ9Y2I1 1504 aa10.25□□□□□ -0.77
GPCPD1-202ENST00000418646 CCDC180Q9P1Z9 1646 aa9.09□□□□□ -0.95
GPCPD1-202ENST00000418646 ZCCHC6Q5VYS8 1495 aaKnown RBP8.8□□□□□ -1
GPCPD1-202ENST00000418646 DCAF1Q9Y4B6 1507 aa8.76□□□□□ -1.01
GPCPD1-202ENST00000418646 MYO15BQ96JP2 1530 aa8.56□□□□□ -1.04
GPCPD1-202ENST00000418646 ABCC9O60706 1549 aa8.37□□□□□ -1.07
GPCPD1-202ENST00000418646 EIF4G1Q04637 1599 aaKnown RBP8.26□□□□□ -1.09
GPCPD1-202ENST00000418646 UNC13AQ9UPW8 1703 aa8.16□□□□□ -1.1
GPCPD1-202ENST00000418646 NACADO15069 1562 aa8.13□□□□□ -1.11
GPCPD1-202ENST00000418646 RB1CC1Q8TDY2 1594 aa8.06□□□□□ -1.12
GPCPD1-202ENST00000418646 BAZ1AQ9NRL2 1556 aaPredicted RBP8.03□□□□□ -1.12
GPCPD1-202ENST00000418646 PEG3Q9GZU2 1588 aa8.01□□□□□ -1.13
GPCPD1-202ENST00000418646 RSF1Q96T23 1441 aaPredicted RBP7.97□□□□□ -1.13
GPCPD1-202ENST00000418646 SCRIBQ14160 1630 aa7.94□□□□□ -1.14
GPCPD1-202ENST00000418646 BICRAQ9NZM4 1560 aa7.89□□□□□ -1.15
GPCPD1-202ENST00000418646 WIZO95785 1651 aa7.88□□□□□ -1.15
GPCPD1-202ENST00000418646 SMARCA4P51532 1647 aa7.88□□□□□ -1.15
GPCPD1-202ENST00000418646 MROH2BQ7Z745 1585 aa7.87□□□□□ -1.15
GPCPD1-202ENST00000418646 SHROOM4Q9ULL8 1493 aa7.86□□□□□ -1.15
GPCPD1-202ENST00000418646 CHIC1Q5VXU3 224 aa7.86□□□□□ -1.15
GPCPD1-202ENST00000418646 TOP2AP11388 1531 aaKnown RBP7.85□□□□□ -1.15
GPCPD1-202ENST00000418646 SMARCA2P51531 1590 aa7.82□□□□□ -1.16
GPCPD1-202ENST00000418646 PRDM2Q13029 1718 aa7.79□□□□□ -1.16
GPCPD1-202ENST00000418646 CECR2Q9BXF3 1484 aa7.79□□□□□ -1.16
GPCPD1-202ENST00000418646 BIVM-ERCC5R4GMW8 1640 aa7.7□□□□□ -1.18
GPCPD1-202ENST00000418646 KIF21BO75037 1637 aa7.66□□□□□ -1.18
GPCPD1-202ENST00000418646 WRNQ14191 1432 aaPredicted RBP eCLIP7.66□□□□□ -1.18
GPCPD1-202ENST00000418646 CCDC88BA6NC98 1476 aa7.61□□□□□ -1.19
GPCPD1-202ENST00000418646 HMGXB3Q12766 1538 aa7.61□□□□□ -1.19
GPCPD1-202ENST00000418646 HRCP23327 699 aa7.6□□□□□ -1.19
GPCPD1-202ENST00000418646 TOP2BQ02880 1626 aa7.58□□□□□ -1.2
GPCPD1-202ENST00000418646 SUPT5HO00267 1087 aaKnown RBP7.58□□□□□ -1.2
GPCPD1-202ENST00000418646 SYNJ1O43426 1573 aa7.58□□□□□ -1.2
GPCPD1-202ENST00000418646 EEA1Q15075 1411 aa7.53□□□□□ -1.2
GPCPD1-202ENST00000418646 ABCC8Q09428 1581 aa7.53□□□□□ -1.2
GPCPD1-202ENST00000418646 ATAD2BQ9ULI0 1458 aa7.5□□□□□ -1.21
GPCPD1-202ENST00000418646 WDR97A6NE52 1622 aa7.5□□□□□ -1.21
GPCPD1-202ENST00000418646 ERICH3Q5RHP9 1530 aa7.5□□□□□ -1.21
GPCPD1-202ENST00000418646 BAZ1BQ9UIG0 1483 aaKnown RBP7.49□□□□□ -1.21
GPCPD1-202ENST00000418646 NCAPD3P42695 1498 aa7.44□□□□□ -1.22
GPCPD1-202ENST00000418646 TNIKQ9UKE5 1360 aa7.42□□□□□ -1.22
GPCPD1-202ENST00000418646 DNAJC5BQ9UF47 199 aa7.42□□□□□ -1.22
GPCPD1-202ENST00000418646 CUX2O14529 1486 aa7.41□□□□□ -1.22
GPCPD1-202ENST00000418646 PRXQ9BXM0 1461 aa7.4□□□□□ -1.22
GPCPD1-202ENST00000418646 CFAP43Q8NDM7 1665 aa7.39□□□□□ -1.23
GPCPD1-202ENST00000418646 RUSC2Q8N2Y8 1516 aa7.38□□□□□ -1.23
GPCPD1-202ENST00000418646 CUX1P39880 1505 aa7.37□□□□□ -1.23
GPCPD1-202ENST00000418646 MAP3K1Q13233 1512 aa7.37□□□□□ -1.23
GPCPD1-202ENST00000418646 TRIM26Q12899 539 aaPredicted RBP7.37□□□□□ -1.23
GPCPD1-202ENST00000418646 CFTRP13569 1480 aa7.37□□□□□ -1.23
GPCPD1-202ENST00000418646 SOGA1O94964 1423 aa7.36□□□□□ -1.23
GPCPD1-202ENST00000418646 GOLGA3Q08378 1498 aa7.36□□□□□ -1.23
GPCPD1-202ENST00000418646 LRRIQ1Q96JM4 1722 aa7.34□□□□□ -1.23
GPCPD1-202ENST00000418646 LOC105371045A0A1W2PR82 267 aa7.34□□□□□ -1.23
GPCPD1-202ENST00000418646 CC2D2AQ9P2K1 1620 aa7.34□□□□□ -1.23
GPCPD1-202ENST00000418646 CEP164Q9UPV0 1460 aa7.34□□□□□ -1.23
GPCPD1-202ENST00000418646 CEP162Q5TB80 1403 aa7.34□□□□□ -1.23
GPCPD1-202ENST00000418646 KIF21AQ7Z4S6 1674 aa7.33□□□□□ -1.24
GPCPD1-202ENST00000418646 CTTNBP2Q8WZ74 1663 aa7.31□□□□□ -1.24
GPCPD1-202ENST00000418646 ARAP1Q96P48 1450 aa7.31□□□□□ -1.24
GPCPD1-202ENST00000418646 ABCA5Q8WWZ7 1642 aa7.28□□□□□ -1.24
GPCPD1-202ENST00000418646 SAMD9Q5K651 1589 aa7.27□□□□□ -1.25
GPCPD1-202ENST00000418646 CUL7Q14999 1698 aa7.26□□□□□ -1.25
GPCPD1-202ENST00000418646 VPS8Q8N3P4 1428 aa7.26□□□□□ -1.25
GPCPD1-202ENST00000418646 RAPGEF2Q9Y4G8 1499 aa7.25□□□□□ -1.25
GPCPD1-202ENST00000418646 RRBP1Q9P2E9 1410 aaKnown RBP7.24□□□□□ -1.25
GPCPD1-202ENST00000418646 CLIP1P30622 1438 aa7.23□□□□□ -1.25
GPCPD1-202ENST00000418646 TRIM41Q8WV44 630 aa7.23□□□□□ -1.25
GPCPD1-202ENST00000418646 PCGF6Q9BYE7 350 aa7.23□□□□□ -1.25
GPCPD1-202ENST00000418646 DNMBPQ6XZF7 1577 aa7.22□□□□□ -1.25
GPCPD1-202ENST00000418646 ARHGEF11O15085 1522 aa7.21□□□□□ -1.26
GPCPD1-202ENST00000418646 THOC2Q8NI27 1593 aaKnown RBP7.21□□□□□ -1.26
GPCPD1-202ENST00000418646 TIAM1Q13009 1591 aa7.2□□□□□ -1.26
GPCPD1-202ENST00000418646 TARBP1Q13395 1621 aaKnown RBP7.2□□□□□ -1.26
GPCPD1-202ENST00000418646 ZEB1P37275 1124 aaPredicted RBP7.19□□□□□ -1.26
GPCPD1-202ENST00000418646 AQRO60306 1485 aaKnown RBP eCLIP7.19□□□□□ -1.263e-7■■■□□ 16.1
GPCPD1-202ENST00000418646 ABCA10Q8WWZ4 1543 aa7.19□□□□□ -1.26
GPCPD1-202ENST00000418646 DCAF8L2P0C7V8 631 aa7.19□□□□□ -1.26
GPCPD1-202ENST00000418646 LAMC3Q9Y6N6 1575 aa7.18□□□□□ -1.26
GPCPD1-202ENST00000418646 ARHGAP35Q9NRY4 1499 aa7.18□□□□□ -1.26
GPCPD1-202ENST00000418646 EFCAB5A4FU69 1503 aa7.17□□□□□ -1.26
GPCPD1-202ENST00000418646 PPARGC1BQ86YN6 1023 aaKnown RBP7.17□□□□□ -1.26
GPCPD1-202ENST00000418646 POLR1AO95602 1720 aaPredicted RBP7.16□□□□□ -1.26
GPCPD1-202ENST00000418646 PBRM1Q86U86 1689 aa7.16□□□□□ -1.26
GPCPD1-202ENST00000418646 MAPKBP1O60336 1514 aa7.15□□□□□ -1.26
GPCPD1-202ENST00000418646 GCC2Q8IWJ2 1684 aa7.14□□□□□ -1.27
GPCPD1-202ENST00000418646 SNAPC4Q5SXM2 1469 aa7.14□□□□□ -1.27
GPCPD1-202ENST00000418646 KDM5BQ9UGL1 1544 aa7.14□□□□□ -1.27
GPCPD1-202ENST00000418646 PCF11O94913 1555 aaKnown RBP7.14□□□□□ -1.27
GPCPD1-202ENST00000418646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.12□□□□□ -1.27
GPCPD1-202ENST00000418646 CSRNP3Q8WYN3 585 aa7.11□□□□□ -1.27
GPCPD1-202ENST00000418646 AEBP2Q6ZN18 517 aaPredicted RBP7.09□□□□□ -1.27
GPCPD1-202ENST00000418646 FGD5Q6ZNL6 1462 aa7.09□□□□□ -1.28
GPCPD1-202ENST00000418646 CLSPNQ9HAW4 1339 aa7.08□□□□□ -1.28
GPCPD1-202ENST00000418646 FYCO1Q9BQS8 1478 aa7.08□□□□□ -1.28
GPCPD1-202ENST00000418646 ADCY10Q96PN6 1610 aa7.08□□□□□ -1.28
GPCPD1-202ENST00000418646 TOPBP1Q92547 1522 aa7.08□□□□□ -1.28
GPCPD1-202ENST00000418646 HECW1Q76N89 1606 aa7.07□□□□□ -1.28
GPCPD1-202ENST00000418646 CROCC2H7BZ55 1655 aa7.07□□□□□ -1.28
GPCPD1-202ENST00000418646 CADPSQ9ULU8 1353 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms