RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 USP4Q13107 963 aa9.07□□□□□ -0.96
RFC4-204ENST00000417876 ARID5BQ14865 1188 aa9.07□□□□□ -0.96
RFC4-204ENST00000417876 CCDC102BQ68D86 513 aa9.07□□□□□ -0.96
RFC4-204ENST00000417876 SFI1A8K8P3 1242 aa9.06□□□□□ -0.96
RFC4-204ENST00000417876 SCNN1AP37088 669 aa9.06□□□□□ -0.96
RFC4-204ENST00000417876 CLP1Q92989 425 aaKnown RBP9.06□□□□□ -0.96
RFC4-204ENST00000417876 TMPRSS4Q9NRS4 437 aa9.06□□□□□ -0.96
RFC4-204ENST00000417876 TLL2Q9Y6L7 1015 aa9.06□□□□□ -0.96
RFC4-204ENST00000417876 LGR5O75473 907 aa9.05□□□□□ -0.96
RFC4-204ENST00000417876 TPCN2Q8NHX9 752 aa9.05□□□□□ -0.96
RFC4-204ENST00000417876 CCDC9Q9Y3X0 531 aaKnown RBP9.05□□□□□ -0.96
RFC4-204ENST00000417876 STAU1O95793 577 aaKnown RBP9.04□□□□□ -0.96
RFC4-204ENST00000417876 TXNDC2Q86VQ3 553 aa9.04□□□□□ -0.96
RFC4-204ENST00000417876 PATL2C9JE40 543 aaKnown RBP9.03□□□□□ -0.96
RFC4-204ENST00000417876 SEC13P55735 322 aa9.03□□□□□ -0.96
RFC4-204ENST00000417876 CCDC125Q86Z20 511 aa9.03□□□□□ -0.96
RFC4-204ENST00000417876 GNEQ9Y223 722 aaKnown RBP9.03□□□□□ -0.96
RFC4-204ENST00000417876 FSHRP23945 695 aa9.02□□□□□ -0.97
RFC4-204ENST00000417876 SLC19A1P41440 591 aa9.02□□□□□ -0.97
RFC4-204ENST00000417876 ERVK-9P63128 1117 aa9.02□□□□□ -0.97
RFC4-204ENST00000417876 SWI5Q1ZZU3 235 aa9.02□□□□□ -0.97
RFC4-204ENST00000417876 TMCO4Q5TGY1 634 aa9.02□□□□□ -0.97
RFC4-204ENST00000417876 MPNDQ8N594 471 aa9.02□□□□□ -0.97
RFC4-204ENST00000417876 SIRT1Q96EB6 747 aa9.02□□□□□ -0.97
RFC4-204ENST00000417876 MRGPRX2Q96LB1 330 aa9.02□□□□□ -0.97
RFC4-204ENST00000417876 PRMT3O60678 531 aa9.01□□□□□ -0.97
RFC4-204ENST00000417876 ATP2B4P23634 1241 aa9.01□□□□□ -0.97
RFC4-204ENST00000417876 PSME1Q06323 249 aa9.01□□□□□ -0.97
RFC4-204ENST00000417876 OCLNQ16625 522 aa9.01□□□□□ -0.97
RFC4-204ENST00000417876 IFFO2Q5TF58 517 aa9.01□□□□□ -0.97
RFC4-204ENST00000417876 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.01□□□□□ -0.97
RFC4-204ENST00000417876 PRIMPOLQ96LW4 560 aa9.01□□□□□ -0.97
RFC4-204ENST00000417876 OSBPL3Q9H4L5 887 aa9.01□□□□□ -0.97
RFC4-204ENST00000417876 TMEM229AB2RXF0 380 aa9□□□□□ -0.97
RFC4-204ENST00000417876 WNT7AO00755 349 aa9□□□□□ -0.97
RFC4-204ENST00000417876 LILRA1O75019 489 aa9□□□□□ -0.97
RFC4-204ENST00000417876 NR3C2P08235 984 aa9□□□□□ -0.97
RFC4-204ENST00000417876 MFAP1P55081 439 aaKnown RBP9□□□□□ -0.97
RFC4-204ENST00000417876 ZNF784Q8NCA9 323 aaPredicted RBP9□□□□□ -0.97
RFC4-204ENST00000417876 CYLDQ9NQC7 956 aa9□□□□□ -0.97
RFC4-204ENST00000417876 ADH1CP00326 375 aa8.99□□□□□ -0.97
RFC4-204ENST00000417876 MYCP01106 439 aaPredicted RBP8.99□□□□□ -0.97
RFC4-204ENST00000417876 ADD1P35611 737 aaKnown RBP8.99□□□□□ -0.97
RFC4-204ENST00000417876 SPRYD7Q5W111 196 aa8.99□□□□□ -0.97
RFC4-204ENST00000417876 CC2D2BQ6DHV5 1058 aa8.99□□□□□ -0.97
RFC4-204ENST00000417876 TSEN2Q8NCE0 465 aaKnown RBP8.99□□□□□ -0.97
RFC4-204ENST00000417876 RGS22Q8NE09 1264 aa8.99□□□□□ -0.97
RFC4-204ENST00000417876 GAS2L2Q8NHY3 880 aa8.99□□□□□ -0.97
RFC4-204ENST00000417876 SCNN1DP51172 638 aa8.98□□□□□ -0.97
RFC4-204ENST00000417876 PPP1R26Q5T8A7 1209 aaPredicted RBP8.98□□□□□ -0.97
RFC4-204ENST00000417876 B4GALNT3Q6L9W6 998 aa8.98□□□□□ -0.97
RFC4-204ENST00000417876 ZNF358Q9NW07 568 aa8.98□□□□□ -0.97
RFC4-204ENST00000417876 ARID4AP29374 1257 aaPredicted RBP8.97□□□□□ -0.97
RFC4-204ENST00000417876 CCDC116Q8IYX3 515 aa8.97□□□□□ -0.97
RFC4-204ENST00000417876 CXXC1Q9P0U4 656 aaPredicted RBP8.97□□□□□ -0.97
RFC4-204ENST00000417876 SERPINB4P48594 390 aa8.96□□□□□ -0.98
RFC4-204ENST00000417876 NR5A1Q13285 461 aa8.96□□□□□ -0.98
RFC4-204ENST00000417876 SND1Q7KZF4 910 aaKnown RBP eCLIP8.96□□□□□ -0.98
RFC4-204ENST00000417876 TAS1R3Q7RTX0 852 aa8.96□□□□□ -0.98
RFC4-204ENST00000417876 PURBQ96QR8 312 aaKnown RBP8.96□□□□□ -0.98
RFC4-204ENST00000417876 HINFPQ9BQA5 517 aa8.96□□□□□ -0.98
RFC4-204ENST00000417876 PKD2L1Q9P0L9 805 aa8.96□□□□□ -0.98
RFC4-204ENST00000417876 MTMR7Q9Y216 660 aa8.96□□□□□ -0.98
RFC4-204ENST00000417876 RBM19Q9Y4C8 960 aaKnown RBP8.96□□□□□ -0.98
RFC4-204ENST00000417876 M0R2N6 131 aa8.95□□□□□ -0.98
RFC4-204ENST00000417876 WEE1P30291 646 aa8.95□□□□□ -0.98
RFC4-204ENST00000417876 DHX9Q08211 1270 aaKnown RBP8.95□□□□□ -0.98
RFC4-204ENST00000417876 CAPN12Q6ZSI9 719 aa8.95□□□□□ -0.98
RFC4-204ENST00000417876 C1orf216Q8TAB5 229 aa8.95□□□□□ -0.98
RFC4-204ENST00000417876 CCER1Q8TC90 406 aaPredicted RBP8.95□□□□□ -0.98
RFC4-204ENST00000417876 ZNF598Q86UK7 904 aaKnown RBP8.94□□□□□ -0.98
RFC4-204ENST00000417876 ETNK1Q9HBU6 452 aa8.94□□□□□ -0.98
RFC4-204ENST00000417876 GDF10P55107 478 aa8.93□□□□□ -0.98
RFC4-204ENST00000417876 MYT1Q01538 1121 aa8.93□□□□□ -0.98
RFC4-204ENST00000417876 FOXC1Q12948 553 aa8.93□□□□□ -0.98
RFC4-204ENST00000417876 ZNF697Q5TEC3 545 aa8.93□□□□□ -0.98
RFC4-204ENST00000417876 TNS4Q8IZW8 715 aa8.93□□□□□ -0.98
RFC4-204ENST00000417876 A0A0G2JS52 829 aa8.92□□□□□ -0.98
RFC4-204ENST00000417876 ALDH1A1P00352 501 aa8.92□□□□□ -0.98
RFC4-204ENST00000417876 INHAP05111 366 aa8.92□□□□□ -0.98
RFC4-204ENST00000417876 EPHA4P54764 986 aa8.92□□□□□ -0.98
RFC4-204ENST00000417876 KDF1Q8NAX2 398 aaPredicted RBP8.92□□□□□ -0.98
RFC4-204ENST00000417876 SERTAD1Q9UHV2 236 aa8.92□□□□□ -0.98
RFC4-204ENST00000417876 WASLO00401 505 aaPredicted RBP8.91□□□□□ -0.98
RFC4-204ENST00000417876 FKBP5Q13451 457 aaPredicted RBP8.91□□□□□ -0.98
RFC4-204ENST00000417876 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
RFC4-204ENST00000417876 SEPT3Q9UH03 358 aa8.91□□□□□ -0.98
RFC4-204ENST00000417876 SOWAHDA6NJG2 315 aa8.9□□□□□ -0.98
RFC4-204ENST00000417876 C21orf2O43822 256 aa8.9□□□□□ -0.98
RFC4-204ENST00000417876 NNTQ13423 1086 aa8.9□□□□□ -0.98
RFC4-204ENST00000417876 FOXD4L5Q5VV16 416 aaPredicted RBP8.9□□□□□ -0.98
RFC4-204ENST00000417876 NPM2Q86SE8 214 aaKnown RBP8.9□□□□□ -0.98
RFC4-204ENST00000417876 FOXD4L4Q8WXT5 416 aaPredicted RBP8.9□□□□□ -0.98
RFC4-204ENST00000417876 KLF16Q9BXK1 252 aaPredicted RBP8.9□□□□□ -0.98
RFC4-204ENST00000417876 PRKD2Q9BZL6 878 aa8.9□□□□□ -0.98
RFC4-204ENST00000417876 RAB6BQ9NRW1 208 aa8.9□□□□□ -0.98
RFC4-204ENST00000417876 J3QL48 77 aa8.89□□□□□ -0.99
RFC4-204ENST00000417876 CBLBQ13191 982 aa8.89□□□□□ -0.99
RFC4-204ENST00000417876 CCDC27Q2M243 656 aa8.89□□□□□ -0.99
RFC4-204ENST00000417876 SLC4A9Q96Q91 983 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms