RNA–Protein interactions for RNA: ENST00000417250.1

SNRPCP9-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 9, humanhuman

BASIC

Gene SNRPCP9, Length 207 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP9-201ENST00000417250 TRIM26Q12899 539 aaPredicted RBP15.14■□□□□ 0.01
SNRPCP9-201ENST00000417250 GPR162Q16538 588 aa15.14■□□□□ 0.01
SNRPCP9-201ENST00000417250 RAPGEF4Q8WZA2 1011 aa15.14■□□□□ 0.01
SNRPCP9-201ENST00000417250 USP54Q70EL1 1684 aa15.13■□□□□ 0.01
SNRPCP9-201ENST00000417250 TATP17735 454 aaPredicted RBP15.13■□□□□ 0.01
SNRPCP9-201ENST00000417250 POLD1P28340 1107 aa15.13■□□□□ 0.01
SNRPCP9-201ENST00000417250 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
SNRPCP9-201ENST00000417250 CCNL1Q9UK58 526 aaPredicted RBP15.13■□□□□ 0.01
SNRPCP9-201ENST00000417250 LTN1O94822 1766 aa15.13■□□□□ 0.01
SNRPCP9-201ENST00000417250 NHSQ6T4R5 1651 aa15.12■□□□□ 0.01
SNRPCP9-201ENST00000417250 MSH5O43196 834 aa15.12■□□□□ 0.01
SNRPCP9-201ENST00000417250 COL23A1Q86Y22 540 aaPredicted RBP15.12■□□□□ 0.01
SNRPCP9-201ENST00000417250 CDCA8Q53HL2 280 aa15.11■□□□□ 0.01
SNRPCP9-201ENST00000417250 MYOM1P52179 1685 aa15.11■□□□□ 0.01
SNRPCP9-201ENST00000417250 CGNL1Q0VF96 1302 aa15.11■□□□□ 0.01
SNRPCP9-201ENST00000417250 NSD2O96028 1365 aa15.11■□□□□ 0.01
SNRPCP9-201ENST00000417250 MPRIPQ6WCQ1 1025 aa15.1■□□□□ 0.01
SNRPCP9-201ENST00000417250 BTAF1O14981 1849 aa15.1■□□□□ 0.01
SNRPCP9-201ENST00000417250 USP47Q96K76 1375 aa15.1■□□□□ 0.01
SNRPCP9-201ENST00000417250 MEGF6O75095 1541 aa15.09■□□□□ 0.01
SNRPCP9-201ENST00000417250 CYP27B1O15528 508 aa15.09■□□□□ 0.01
SNRPCP9-201ENST00000417250 PELP1Q8IZL8 1130 aaKnown RBP15.09■□□□□ 0.01
SNRPCP9-201ENST00000417250 EMILIN1Q9Y6C2 1016 aa15.09■□□□□ 0.01
SNRPCP9-201ENST00000417250 INSRP06213 1382 aa15.09■□□□□ 0.01
SNRPCP9-201ENST00000417250 MAP3K5Q99683 1374 aa15.09■□□□□ 0.01
SNRPCP9-201ENST00000417250 PPM1GO15355 546 aaPredicted RBP15.08■□□□□ 0
SNRPCP9-201ENST00000417250 NLGN2Q8NFZ4 835 aa15.08■□□□□ 0
SNRPCP9-201ENST00000417250 UTRNP46939 3433 aa15.08■□□□□ 0
SNRPCP9-201ENST00000417250 RTL1A6NKG5 1358 aa15.07■□□□□ 0
SNRPCP9-201ENST00000417250 PAPPAQ13219 1627 aa15.06■□□□□ 0
SNRPCP9-201ENST00000417250 MSL1Q68DK7 614 aa15.06■□□□□ 0
SNRPCP9-201ENST00000417250 SMIM5Q71RC9 77 aa15.05■□□□□ -0
SNRPCP9-201ENST00000417250 PIGBQ92521 554 aa15.05■□□□□ -0
SNRPCP9-201ENST00000417250 PCDH11XQ9BZA7 1347 aa15.04■□□□□ -0
SNRPCP9-201ENST00000417250 PCDH11YQ9BZA8 1340 aa15.04■□□□□ -0
SNRPCP9-201ENST00000417250 EYA1Q99502 592 aa15.04■□□□□ -0
SNRPCP9-201ENST00000417250 SMG6Q86US8 1419 aaKnown RBP15.03■□□□□ -0
SNRPCP9-201ENST00000417250 FLT4P35916 1363 aa15.03■□□□□ -0
SNRPCP9-201ENST00000417250 NKX1-1Q15270 411 aaPredicted RBP15.03■□□□□ -0
SNRPCP9-201ENST00000417250 POLKQ9UBT6 870 aa15.03■□□□□ -0
SNRPCP9-201ENST00000417250 TIMELESSQ9UNS1 1208 aa15.03■□□□□ -0
SNRPCP9-201ENST00000417250 RGPD2P0DJD1 1756 aa15.03■□□□□ -0
SNRPCP9-201ENST00000417250 KIF24Q5T7B8 1368 aa15.02■□□□□ -0
SNRPCP9-201ENST00000417250 WASHC2AQ641Q2 1341 aa15.02■□□□□ -0
SNRPCP9-201ENST00000417250 YBX3P16989 372 aaKnown RBP eCLIP15.02■□□□□ -0
SNRPCP9-201ENST00000417250 C1QTNF8P60827 252 aa15.02■□□□□ -0
SNRPCP9-201ENST00000417250 FLAD1Q8NFF5 587 aa15.02■□□□□ -0
SNRPCP9-201ENST00000417250 SMARCC1Q92922 1105 aaPredicted RBP15.02■□□□□ -0
SNRPCP9-201ENST00000417250 SPG7Q9UQ90 795 aa15.02■□□□□ -0
SNRPCP9-201ENST00000417250 FAM208AQ9UK61 1670 aaKnown RBP15.02□□□□□ -0.01
SNRPCP9-201ENST00000417250 GRIN3BO60391 1043 aa15.01□□□□□ -0.01
SNRPCP9-201ENST00000417250 HMGB2P26583 209 aaKnown RBP15.01□□□□□ -0.01
SNRPCP9-201ENST00000417250 AMIGO3Q86WK7 504 aa15.01□□□□□ -0.01
SNRPCP9-201ENST00000417250 POLR3GLQ9BT43 218 aa15.01□□□□□ -0.01
SNRPCP9-201ENST00000417250 PCGF6Q9BYE7 350 aa15.01□□□□□ -0.01
SNRPCP9-201ENST00000417250 PALLDQ8WX93 1383 aa15□□□□□ -0.01
SNRPCP9-201ENST00000417250 TNNT2P45379 298 aaPredicted RBP15□□□□□ -0.01
SNRPCP9-201ENST00000417250 NSD3Q9BZ95 1437 aa15□□□□□ -0.01
SNRPCP9-201ENST00000417250 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.99□□□□□ -0.01
SNRPCP9-201ENST00000417250 ASAP1Q9ULH1 1129 aa14.99□□□□□ -0.01
SNRPCP9-201ENST00000417250 CD2APQ9Y5K6 639 aa14.99□□□□□ -0.01
SNRPCP9-201ENST00000417250 LOC102724428A0A0B4J2F2 783 aa14.98□□□□□ -0.01
SNRPCP9-201ENST00000417250 SIK1P57059 783 aa14.98□□□□□ -0.01
SNRPCP9-201ENST00000417250 AK7Q96M32 723 aa14.98□□□□□ -0.01
SNRPCP9-201ENST00000417250 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.97□□□□□ -0.01
SNRPCP9-201ENST00000417250 PHF14O94880 888 aa14.97□□□□□ -0.01
SNRPCP9-201ENST00000417250 IFNL2Q8IZJ0 200 aa14.97□□□□□ -0.01
SNRPCP9-201ENST00000417250 SENP3-EIF4A1A0A087X0R7 540 aa14.96□□□□□ -0.01
SNRPCP9-201ENST00000417250 PHKG2P15735 406 aa14.96□□□□□ -0.01
SNRPCP9-201ENST00000417250 EIF4A2Q14240 407 aaKnown RBP14.96□□□□□ -0.01
SNRPCP9-201ENST00000417250 LINC00116Q8NCU8 138 aa14.96□□□□□ -0.01
SNRPCP9-201ENST00000417250 ATG3Q9NT62 314 aa14.96□□□□□ -0.01
SNRPCP9-201ENST00000417250 TMOD3Q9NYL9 352 aa14.96□□□□□ -0.01
SNRPCP9-201ENST00000417250 LY75O60449 1722 aa14.95□□□□□ -0.02
SNRPCP9-201ENST00000417250 DOT1LQ8TEK3 1739 aa14.95□□□□□ -0.02
SNRPCP9-201ENST00000417250 SHANK3Q9BYB0 1731 aa14.95□□□□□ -0.02
SNRPCP9-201ENST00000417250 ATP6V1AP38606 617 aa14.95□□□□□ -0.02
SNRPCP9-201ENST00000417250 ITPK1Q13572 414 aa14.95□□□□□ -0.02
SNRPCP9-201ENST00000417250 PANK3Q9H999 370 aa14.95□□□□□ -0.02
SNRPCP9-201ENST00000417250 GIGYF1O75420 1035 aaPredicted RBP14.93□□□□□ -0.02
SNRPCP9-201ENST00000417250 WWC3Q9ULE0 1092 aa14.93□□□□□ -0.02
SNRPCP9-201ENST00000417250 CHD4Q14839 1912 aa14.92□□□□□ -0.02
SNRPCP9-201ENST00000417250 GOLGB1Q14789 3259 aaKnown RBP14.92□□□□□ -0.02
SNRPCP9-201ENST00000417250 HSPA5P11021 654 aaKnown RBP14.92□□□□□ -0.02
SNRPCP9-201ENST00000417250 SSFA2P28290 1259 aa14.92□□□□□ -0.02
SNRPCP9-201ENST00000417250 COL24A1Q17RW2 1714 aa14.92□□□□□ -0.02
SNRPCP9-201ENST00000417250 QSER1Q2KHR3 1735 aa14.92□□□□□ -0.02
SNRPCP9-201ENST00000417250 NCAPD2Q15021 1401 aa14.92□□□□□ -0.02
SNRPCP9-201ENST00000417250 GNPATO15228 680 aa14.91□□□□□ -0.02
SNRPCP9-201ENST00000417250 EIF4G2P78344 907 aaKnown RBP eCLIP14.91□□□□□ -0.02
SNRPCP9-201ENST00000417250 SLC4A9Q96Q91 983 aa14.91□□□□□ -0.02
SNRPCP9-201ENST00000417250 TUBGCP6Q96RT7 1819 aa14.9□□□□□ -0.02
SNRPCP9-201ENST00000417250 ERVV-2B6SEH9 535 aa14.9□□□□□ -0.02
SNRPCP9-201ENST00000417250 PLEKHO1Q53GL0 409 aaPredicted RBP14.9□□□□□ -0.02
SNRPCP9-201ENST00000417250 RBM42Q9BTD8 480 aaKnown RBP14.9□□□□□ -0.02
SNRPCP9-201ENST00000417250 CLSPNQ9HAW4 1339 aa14.9□□□□□ -0.02
SNRPCP9-201ENST00000417250 TRAPPC3LQ5T215 181 aa14.89□□□□□ -0.03
SNRPCP9-201ENST00000417250 ARHGEF1Q92888 912 aaKnown RBP14.88□□□□□ -0.03
SNRPCP9-201ENST00000417250 DCAF5Q96JK2 942 aa14.88□□□□□ -0.03
SNRPCP9-201ENST00000417250 IGSF1Q8N6C5 1336 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms