RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 RAPGEF4Q8WZA2 1011 aa21.77■■□□□ 1.08
SBDSP1-201ENST00000415772 TESK2Q96S53 571 aa21.77■■□□□ 1.08
SBDSP1-201ENST00000415772 RTL1A6NKG5 1358 aa21.76■■□□□ 1.07
SBDSP1-201ENST00000415772 DOT1LQ8TEK3 1739 aa21.76■■□□□ 1.07
SBDSP1-201ENST00000415772 FBLN1P23142 703 aa21.75■■□□□ 1.07
SBDSP1-201ENST00000415772 ZNF784Q8NCA9 323 aaPredicted RBP21.75■■□□□ 1.07
SBDSP1-201ENST00000415772 AKT1S1Q96B36 256 aa21.75■■□□□ 1.07
SBDSP1-201ENST00000415772 USP47Q96K76 1375 aa21.74■■□□□ 1.07
SBDSP1-201ENST00000415772 RRS1Q15050 365 aaKnown RBP21.74■■□□□ 1.07
SBDSP1-201ENST00000415772 GGNBP2Q9H3C7 697 aa21.74■■□□□ 1.07
SBDSP1-201ENST00000415772 CCNL1Q9UK58 526 aaPredicted RBP21.74■■□□□ 1.07
SBDSP1-201ENST00000415772 MAP3K5Q99683 1374 aa21.74■■□□□ 1.07
SBDSP1-201ENST00000415772 TATP17735 454 aaPredicted RBP21.73■■□□□ 1.07
SBDSP1-201ENST00000415772 KCNQ4P56696 695 aa21.73■■□□□ 1.07
SBDSP1-201ENST00000415772 CDCA8Q53HL2 280 aa21.73■■□□□ 1.07
SBDSP1-201ENST00000415772 USHBP1Q8N6Y0 703 aa21.72■■□□□ 1.07
SBDSP1-201ENST00000415772 CGNL1Q0VF96 1302 aa21.72■■□□□ 1.07
SBDSP1-201ENST00000415772 PNPLA7Q6ZV29 1317 aa21.72■■□□□ 1.07
SBDSP1-201ENST00000415772 MEGF6O75095 1541 aa21.71■■□□□ 1.07
SBDSP1-201ENST00000415772 HMGB2P26583 209 aaKnown RBP21.71■■□□□ 1.07
SBDSP1-201ENST00000415772 QSER1Q2KHR3 1735 aa21.71■■□□□ 1.07
SBDSP1-201ENST00000415772 RGPD2P0DJD1 1756 aa21.71■■□□□ 1.07
SBDSP1-201ENST00000415772 FYB1O15117 783 aa21.69■■□□□ 1.06
SBDSP1-201ENST00000415772 NBPF6Q5VWK0 638 aa21.69■■□□□ 1.06
SBDSP1-201ENST00000415772 NBPF4Q96M43 638 aa21.69■■□□□ 1.06
SBDSP1-201ENST00000415772 CHD4Q14839 1912 aa21.67■■□□□ 1.06
SBDSP1-201ENST00000415772 PCDH11XQ9BZA7 1347 aa21.67■■□□□ 1.06
SBDSP1-201ENST00000415772 PCDH11YQ9BZA8 1340 aa21.67■■□□□ 1.06
SBDSP1-201ENST00000415772 LY75O60449 1722 aa21.66■■□□□ 1.06
SBDSP1-201ENST00000415772 NSD2O96028 1365 aa21.66■■□□□ 1.06
SBDSP1-201ENST00000415772 SHANK3Q9BYB0 1731 aa21.66■■□□□ 1.06
SBDSP1-201ENST00000415772 FLT4P35916 1363 aa21.65■■□□□ 1.06
SBDSP1-201ENST00000415772 KIF20BQ96Q89 1820 aa21.65■■□□□ 1.06
SBDSP1-201ENST00000415772 INSRP06213 1382 aa21.64■■□□□ 1.06
SBDSP1-201ENST00000415772 TUBGCP6Q96RT7 1819 aa21.64■■□□□ 1.05
SBDSP1-201ENST00000415772 HSP90AB2PQ58FF8 381 aa21.63■■□□□ 1.05
SBDSP1-201ENST00000415772 MPRIPQ6WCQ1 1025 aa21.63■■□□□ 1.05
SBDSP1-201ENST00000415772 SENP3-EIF4A1A0A087X0R7 540 aa21.62■■□□□ 1.05
SBDSP1-201ENST00000415772 PPM1GO15355 546 aaPredicted RBP21.62■■□□□ 1.05
SBDSP1-201ENST00000415772 KIF24Q5T7B8 1368 aa21.61■■□□□ 1.05
SBDSP1-201ENST00000415772 FLAD1Q8NFF5 587 aa21.61■■□□□ 1.05
SBDSP1-201ENST00000415772 MSL1Q68DK7 614 aa21.6■■□□□ 1.05
SBDSP1-201ENST00000415772 COL23A1Q86Y22 540 aaPredicted RBP21.6■■□□□ 1.05
SBDSP1-201ENST00000415772 NLGN2Q8NFZ4 835 aa21.6■■□□□ 1.05
SBDSP1-201ENST00000415772 PALLDQ8WX93 1383 aa21.6■■□□□ 1.05
SBDSP1-201ENST00000415772 GRIN3BO60391 1043 aa21.59■■□□□ 1.05
SBDSP1-201ENST00000415772 SMARCC1Q92922 1105 aaPredicted RBP21.59■■□□□ 1.05
SBDSP1-201ENST00000415772 AK7Q96M32 723 aa21.59■■□□□ 1.05
SBDSP1-201ENST00000415772 GIGYF1O75420 1035 aaPredicted RBP21.58■■□□□ 1.05
SBDSP1-201ENST00000415772 C1QTNF8P60827 252 aa21.58■■□□□ 1.05
SBDSP1-201ENST00000415772 C5P01031 1676 aa21.58■■□□□ 1.05
SBDSP1-201ENST00000415772 COL24A1Q17RW2 1714 aa21.58■■□□□ 1.04
SBDSP1-201ENST00000415772 NSD3Q9BZ95 1437 aa21.57■■□□□ 1.04
SBDSP1-201ENST00000415772 SPG7Q9UQ90 795 aa21.57■■□□□ 1.04
SBDSP1-201ENST00000415772 POLR3GLQ9BT43 218 aa21.56■■□□□ 1.04
SBDSP1-201ENST00000415772 EMILIN1Q9Y6C2 1016 aa21.56■■□□□ 1.04
SBDSP1-201ENST00000415772 CYP27B1O15528 508 aa21.53■■□□□ 1.04
SBDSP1-201ENST00000415772 PHF14O94880 888 aa21.52■■□□□ 1.04
SBDSP1-201ENST00000415772 CARD14Q9BXL6 1004 aa21.51■■□□□ 1.03
SBDSP1-201ENST00000415772 TMOD3Q9NYL9 352 aa21.51■■□□□ 1.03
SBDSP1-201ENST00000415772 CD2APQ9Y5K6 639 aa21.5■■□□□ 1.03
SBDSP1-201ENST00000415772 YBX3P16989 372 aaKnown RBP eCLIP21.49■■□□□ 1.03
SBDSP1-201ENST00000415772 C4BP0C0L5 1744 aa21.49■■□□□ 1.03
SBDSP1-201ENST00000415772 PKD1L3Q7Z443 1732 aa21.49■■□□□ 1.03
SBDSP1-201ENST00000415772 PIGBQ92521 554 aa21.48■■□□□ 1.03
SBDSP1-201ENST00000415772 WASHC2AQ641Q2 1341 aa21.48■■□□□ 1.03
SBDSP1-201ENST00000415772 ITGB4P16144 1822 aa21.48■■□□□ 1.03
SBDSP1-201ENST00000415772 TAF1LQ8IZX4 1826 aa21.48■■□□□ 1.03
SBDSP1-201ENST00000415772 UTRNP46939 3433 aa21.47■■□□□ 1.03
SBDSP1-201ENST00000415772 TOGARAM1Q9Y4F4 1720 aa21.46■■□□□ 1.03
SBDSP1-201ENST00000415772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.46■■□□□ 1.03
SBDSP1-201ENST00000415772 IFNL2Q8IZJ0 200 aa21.46■■□□□ 1.03
SBDSP1-201ENST00000415772 TIMELESSQ9UNS1 1208 aa21.46■■□□□ 1.03
SBDSP1-201ENST00000415772 LOC102724428A0A0B4J2F2 783 aa21.45■■□□□ 1.02
SBDSP1-201ENST00000415772 TNNT2P45379 298 aaPredicted RBP21.45■■□□□ 1.02
SBDSP1-201ENST00000415772 SIK1P57059 783 aa21.45■■□□□ 1.02
SBDSP1-201ENST00000415772 EYA1Q99502 592 aa21.45■■□□□ 1.02
SBDSP1-201ENST00000415772 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.45■■□□□ 1.02
SBDSP1-201ENST00000415772 SSFA2P28290 1259 aa21.44■■□□□ 1.02
SBDSP1-201ENST00000415772 NKX1-1Q15270 411 aaPredicted RBP21.44■■□□□ 1.02
SBDSP1-201ENST00000415772 GNPATO15228 680 aa21.43■■□□□ 1.02
SBDSP1-201ENST00000415772 ATP6V1AP38606 617 aa21.43■■□□□ 1.02
SBDSP1-201ENST00000415772 ANKRD26Q9UPS8 1709 aa21.42■■□□□ 1.02
SBDSP1-201ENST00000415772 MAP2P11137 1827 aaKnown RBP21.41■■□□□ 1.02
SBDSP1-201ENST00000415772 NCAPD2Q15021 1401 aa21.41■■□□□ 1.02
SBDSP1-201ENST00000415772 PHKG2P15735 406 aa21.41■■□□□ 1.02
SBDSP1-201ENST00000415772 GPBP1L1Q9HC44 474 aaPredicted RBP21.41■■□□□ 1.02
SBDSP1-201ENST00000415772 POLKQ9UBT6 870 aa21.41■■□□□ 1.02
SBDSP1-201ENST00000415772 IGSF1Q8N6C5 1336 aa21.4■■□□□ 1.02
SBDSP1-201ENST00000415772 LINC00116Q8NCU8 138 aa21.4■■□□□ 1.02
SBDSP1-201ENST00000415772 PCGF6Q9BYE7 350 aa21.4■■□□□ 1.02
SBDSP1-201ENST00000415772 WWC3Q9ULE0 1092 aa21.4■■□□□ 1.02
SBDSP1-201ENST00000415772 ASAP1Q9ULH1 1129 aa21.4■■□□□ 1.02
SBDSP1-201ENST00000415772 ATP10DQ9P241 1426 aa21.39■■□□□ 1.02
SBDSP1-201ENST00000415772 SMIM5Q71RC9 77 aa21.39■■□□□ 1.01
SBDSP1-201ENST00000415772 UBR3Q6ZT12 1888 aa21.39■■□□□ 1.01
SBDSP1-201ENST00000415772 CLSPNQ9HAW4 1339 aa21.38■■□□□ 1.01
SBDSP1-201ENST00000415772 HSP90AB1P08238 724 aaKnown RBP21.38■■□□□ 1.01
SBDSP1-201ENST00000415772 EIF4A2Q14240 407 aaKnown RBP21.38■■□□□ 1.01
SBDSP1-201ENST00000415772 ZNF526Q8TF50 670 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms