RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 SOS1Q07889 1333 aaPredicted RBP17.28■□□□□ 0.36
ZNF3-206ENST00000415068 ABCA3Q99758 1704 aa17.28■□□□□ 0.36
ZNF3-206ENST00000415068 HAP1P54257 671 aaPredicted RBP17.28■□□□□ 0.36
ZNF3-206ENST00000415068 ALDH1L2Q3SY69 923 aa17.28■□□□□ 0.36
ZNF3-206ENST00000415068 COL16A1Q07092 1604 aaPredicted RBP17.28■□□□□ 0.36
ZNF3-206ENST00000415068 UBAP1LF5GYI3 381 aa17.27■□□□□ 0.36
ZNF3-206ENST00000415068 CHRNA2Q15822 529 aa17.27■□□□□ 0.36
ZNF3-206ENST00000415068 IL17REQ8NFR9 667 aa17.27■□□□□ 0.36
ZNF3-206ENST00000415068 OVOS2A0A0G2JMS6 1433 aa17.27■□□□□ 0.35
ZNF3-206ENST00000415068 MAP3K5Q99683 1374 aa17.27■□□□□ 0.35
ZNF3-206ENST00000415068 RGPD2P0DJD1 1756 aa17.26■□□□□ 0.35
ZNF3-206ENST00000415068 EXOSC9Q06265 439 aaKnown RBP17.26■□□□□ 0.35
ZNF3-206ENST00000415068 PDE3AQ14432 1141 aa17.26■□□□□ 0.35
ZNF3-206ENST00000415068 NLRP2Q9NX02 1062 aa17.26■□□□□ 0.35
ZNF3-206ENST00000415068 ZBTB7CA1YPR0 619 aa17.25■□□□□ 0.35
ZNF3-206ENST00000415068 VAMP4O75379 141 aa17.25■□□□□ 0.35
ZNF3-206ENST00000415068 TAF7Q15545 349 aaPredicted RBP17.25■□□□□ 0.35
ZNF3-206ENST00000415068 RAPGEF4Q8WZA2 1011 aa17.25■□□□□ 0.35
ZNF3-206ENST00000415068 MBIPQ9NS73 344 aa17.25■□□□□ 0.35
ZNF3-206ENST00000415068 SPG7Q9UQ90 795 aa17.25■□□□□ 0.35
ZNF3-206ENST00000415068 COL5A2P05997 1499 aaPredicted RBP17.24■□□□□ 0.35
ZNF3-206ENST00000415068 TATP17735 454 aaPredicted RBP17.24■□□□□ 0.35
ZNF3-206ENST00000415068 USHBP1Q8N6Y0 703 aa17.24■□□□□ 0.35
ZNF3-206ENST00000415068 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
ZNF3-206ENST00000415068 TSR2Q969E8 191 aaKnown RBP17.23■□□□□ 0.35
ZNF3-206ENST00000415068 PPP4R2Q9NY27 417 aa17.23■□□□□ 0.35
ZNF3-206ENST00000415068 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
ZNF3-206ENST00000415068 CSB-PGBD3P0DP91 1061 aa17.22■□□□□ 0.35
ZNF3-206ENST00000415068 AAMPQ13685 434 aa17.22■□□□□ 0.35
ZNF3-206ENST00000415068 DCTN1Q14203 1278 aa17.22■□□□□ 0.35
ZNF3-206ENST00000415068 MCM10Q7L590 875 aa17.22■□□□□ 0.35
ZNF3-206ENST00000415068 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
ZNF3-206ENST00000415068 MS4A1P11836 297 aa17.21■□□□□ 0.35
ZNF3-206ENST00000415068 EVA1CP58658 441 aa17.21■□□□□ 0.35
ZNF3-206ENST00000415068 ARHGAP45Q92619 1136 aa17.21■□□□□ 0.35
ZNF3-206ENST00000415068 CHMP4AQ9BY43 222 aa17.21■□□□□ 0.35
ZNF3-206ENST00000415068 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
ZNF3-206ENST00000415068 RNMTO43148 476 aaKnown RBP17.2■□□□□ 0.34
ZNF3-206ENST00000415068 HSP90AB1P08238 724 aaKnown RBP17.2■□□□□ 0.34
ZNF3-206ENST00000415068 NKX1-1Q15270 411 aaPredicted RBP17.2■□□□□ 0.34
ZNF3-206ENST00000415068 C1orf141Q5JVX7 400 aa17.2■□□□□ 0.34
ZNF3-206ENST00000415068 ZNF530Q6P9A1 599 aaPredicted RBP17.2■□□□□ 0.34
ZNF3-206ENST00000415068 JCADQ9P266 1359 aa17.19■□□□□ 0.34
ZNF3-206ENST00000415068 LRRC37A3O60309 1634 aa17.19■□□□□ 0.34
ZNF3-206ENST00000415068 BCAR3O75815 825 aa17.19■□□□□ 0.34
ZNF3-206ENST00000415068 PLEKHG5O94827 1062 aa17.19■□□□□ 0.34
ZNF3-206ENST00000415068 IFNL2Q8IZJ0 200 aa17.19■□□□□ 0.34
ZNF3-206ENST00000415068 PIP4K2BP78356 416 aa17.18■□□□□ 0.34
ZNF3-206ENST00000415068 TOM1L2Q6ZVM7 507 aa17.18■□□□□ 0.34
ZNF3-206ENST00000415068 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
ZNF3-206ENST00000415068 PHKG2P15735 406 aa17.17■□□□□ 0.34
ZNF3-206ENST00000415068 C8orf58Q8NAV2 365 aa17.17■□□□□ 0.34
ZNF3-206ENST00000415068 SSH1Q8WYL5 1049 aa17.17■□□□□ 0.34
ZNF3-206ENST00000415068 LGR6Q9HBX8 967 aa17.17■□□□□ 0.34
ZNF3-206ENST00000415068 BTG4Q9NY30 223 aa17.17■□□□□ 0.34
ZNF3-206ENST00000415068 THRAP3Q9Y2W1 955 aaKnown RBP17.17■□□□□ 0.34
ZNF3-206ENST00000415068 LAS1LQ9Y4W2 734 aaKnown RBP17.17■□□□□ 0.34
ZNF3-206ENST00000415068 SPATA31A6Q5VVP1 1343 aa17.17■□□□□ 0.34
ZNF3-206ENST00000415068 HOXB7P09629 217 aa17.16■□□□□ 0.34
ZNF3-206ENST00000415068 IL2RBP14784 551 aa17.16■□□□□ 0.34
ZNF3-206ENST00000415068 TWISTNBQ3B726 338 aaPredicted RBP17.16■□□□□ 0.34
ZNF3-206ENST00000415068 LARP1Q6PKG0 1096 aaKnown RBP17.16■□□□□ 0.34
ZNF3-206ENST00000415068 ZCRB1Q8TBF4 217 aaKnown RBP17.16■□□□□ 0.34
ZNF3-206ENST00000415068 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
ZNF3-206ENST00000415068 CDCA7Q9BWT1 371 aaPredicted RBP17.16■□□□□ 0.34
ZNF3-206ENST00000415068 PKD1L3Q7Z443 1732 aa17.16■□□□□ 0.34
ZNF3-206ENST00000415068 TSPYL6Q8N831 410 aa17.14■□□□□ 0.33
ZNF3-206ENST00000415068 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
ZNF3-206ENST00000415068 MEGF6O75095 1541 aa17.14■□□□□ 0.33
ZNF3-206ENST00000415068 HEG1Q9ULI3 1381 aa17.14■□□□□ 0.33
ZNF3-206ENST00000415068 CYP27B1O15528 508 aa17.13■□□□□ 0.33
ZNF3-206ENST00000415068 PLIN1O60240 522 aa17.13■□□□□ 0.33
ZNF3-206ENST00000415068 MRPL50Q8N5N7 158 aaKnown RBP17.13■□□□□ 0.33
ZNF3-206ENST00000415068 KIF16BQ96L93 1317 aa17.13■□□□□ 0.33
ZNF3-206ENST00000415068 SLIT2O94813 1529 aa17.12■□□□□ 0.33
ZNF3-206ENST00000415068 ERVV-2B6SEH9 535 aa17.12■□□□□ 0.33
ZNF3-206ENST00000415068 TEFQ10587 303 aa17.12■□□□□ 0.33
ZNF3-206ENST00000415068 ZKSCAN2Q63HK3 967 aa17.12■□□□□ 0.33
ZNF3-206ENST00000415068 MPRIPQ6WCQ1 1025 aa17.12■□□□□ 0.33
ZNF3-206ENST00000415068 FNBP4Q8N3X1 1017 aaPredicted RBP17.12■□□□□ 0.33
ZNF3-206ENST00000415068 PARP4Q9UKK3 1724 aaKnown RBP17.11■□□□□ 0.33
ZNF3-206ENST00000415068 NWD2Q9ULI1 1742 aa17.11■□□□□ 0.33
ZNF3-206ENST00000415068 EIF4A1P60842 406 aaKnown RBP17.11■□□□□ 0.33
ZNF3-206ENST00000415068 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
ZNF3-206ENST00000415068 PCDH11XQ9BZA7 1347 aa17.11■□□□□ 0.33
ZNF3-206ENST00000415068 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
ZNF3-206ENST00000415068 DISP2A7MBM2 1401 aa17.11■□□□□ 0.33
ZNF3-206ENST00000415068 IRX6P78412 446 aaPredicted RBP17.1■□□□□ 0.33
ZNF3-206ENST00000415068 SLC52A2Q9HAB3 445 aa17.1■□□□□ 0.33
ZNF3-206ENST00000415068 SMC4Q9NTJ3 1288 aa17.1■□□□□ 0.33
ZNF3-206ENST00000415068 C20orf194Q5TEA3 1177 aa17.09■□□□□ 0.33
ZNF3-206ENST00000415068 BARGINQ6ZT62 677 aa17.09■□□□□ 0.33
ZNF3-206ENST00000415068 EXOC6Q8TAG9 804 aa17.09■□□□□ 0.33
ZNF3-206ENST00000415068 STRN4Q9NRL3 753 aa17.09■□□□□ 0.33
ZNF3-206ENST00000415068 SCN11AQ9UI33 1791 aa17.09■□□□□ 0.33
ZNF3-206ENST00000415068 CACNA1FO60840 1977 aa17.08■□□□□ 0.33
ZNF3-206ENST00000415068 SIPA1L3O60292 1781 aaPredicted RBP17.08■□□□□ 0.33
ZNF3-206ENST00000415068 SPATA31A1Q5TZJ5 1347 aa17.08■□□□□ 0.32
ZNF3-206ENST00000415068 BTBD11A6QL63 1104 aa17.08■□□□□ 0.32
ZNF3-206ENST00000415068 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms