RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 NOP58Q9Y2X3 529 aaKnown RBP8.07□□□□□ -1.12
ITGB1-203ENST00000414670 ABCC6O95255 1503 aa8.07□□□□□ -1.12
ITGB1-203ENST00000414670 NCAPD2Q15021 1401 aa8.06□□□□□ -1.12
ITGB1-203ENST00000414670 HTATSF1O43719 755 aaKnown RBP8.06□□□□□ -1.12
ITGB1-203ENST00000414670 PLEKHO1Q53GL0 409 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-203ENST00000414670 THUMPD2Q9BTF0 503 aaKnown RBP8.06□□□□□ -1.12
ITGB1-203ENST00000414670 RNF123Q5XPI4 1314 aa8.05□□□□□ -1.12
ITGB1-203ENST00000414670 FAM83GA6ND36 823 aa8.05□□□□□ -1.12
ITGB1-203ENST00000414670 GNAT3A8MTJ3 354 aa8.05□□□□□ -1.12
ITGB1-203ENST00000414670 GNAI1P63096 354 aa8.05□□□□□ -1.12
ITGB1-203ENST00000414670 DCTN1Q14203 1278 aa8.05□□□□□ -1.12
ITGB1-203ENST00000414670 AMOTQ4VCS5 1084 aa8.05□□□□□ -1.12
ITGB1-203ENST00000414670 RAPGEF4Q8WZA2 1011 aa8.05□□□□□ -1.12
ITGB1-203ENST00000414670 RTF1Q92541 710 aaKnown RBP8.05□□□□□ -1.12
ITGB1-203ENST00000414670 IFT57Q9NWB7 429 aa8.05□□□□□ -1.12
ITGB1-203ENST00000414670 WDR17Q8IZU2 1322 aa8.04□□□□□ -1.12
ITGB1-203ENST00000414670 CT47B1P0C2W7 299 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-203ENST00000414670 ZNF853P0CG23 659 aa8.04□□□□□ -1.12
ITGB1-203ENST00000414670 TATP17735 454 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-203ENST00000414670 EVA1CP58658 441 aa8.04□□□□□ -1.12
ITGB1-203ENST00000414670 TOM1L2Q6ZVM7 507 aa8.04□□□□□ -1.12
ITGB1-203ENST00000414670 MCM10Q7L590 875 aa8.04□□□□□ -1.12
ITGB1-203ENST00000414670 TSR2Q969E8 191 aaKnown RBP8.04□□□□□ -1.12
ITGB1-203ENST00000414670 CFAP44Q96MT7 982 aa8.04□□□□□ -1.12
ITGB1-203ENST00000414670 IPO9Q96P70 1041 aaKnown RBP8.04□□□□□ -1.12
ITGB1-203ENST00000414670 LAS1LQ9Y4W2 734 aaKnown RBP8.04□□□□□ -1.12
ITGB1-203ENST00000414670 LTN1O94822 1766 aa8.04□□□□□ -1.12
ITGB1-203ENST00000414670 CRYBG1Q9Y4K1 1723 aa8.03□□□□□ -1.12
ITGB1-203ENST00000414670 CAMTA1Q9Y6Y1 1673 aa8.03□□□□□ -1.12
ITGB1-203ENST00000414670 COL5A2P05997 1499 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-203ENST00000414670 MAP3K5Q99683 1374 aa8.03□□□□□ -1.12
ITGB1-203ENST00000414670 ADAMTS2O95450 1211 aa8.03□□□□□ -1.12
ITGB1-203ENST00000414670 RRP1P56182 461 aaKnown RBP8.03□□□□□ -1.12
ITGB1-203ENST00000414670 EXOSC9Q06265 439 aaKnown RBP8.03□□□□□ -1.12
ITGB1-203ENST00000414670 ZNF530Q6P9A1 599 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-203ENST00000414670 CARD10Q9BWT7 1032 aa8.03□□□□□ -1.12
ITGB1-203ENST00000414670 STRN4Q9NRL3 753 aa8.03□□□□□ -1.12
ITGB1-203ENST00000414670 BTG4Q9NY30 223 aa8.03□□□□□ -1.12
ITGB1-203ENST00000414670 COL16A1Q07092 1604 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-203ENST00000414670 PLEKHG2Q9H7P9 1386 aa8.02□□□□□ -1.13
ITGB1-203ENST00000414670 JCADQ9P266 1359 aa8.02□□□□□ -1.13
ITGB1-203ENST00000414670 NUTM2BA6NNL0 878 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-203ENST00000414670 NUTM2EB1AL46 878 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-203ENST00000414670 CHL1O00533 1208 aa8.02□□□□□ -1.13
ITGB1-203ENST00000414670 IRX6P78412 446 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-203ENST00000414670 AKAP4Q5JQC9 854 aa8.02□□□□□ -1.13
ITGB1-203ENST00000414670 C1orf141Q5JVX7 400 aa8.02□□□□□ -1.13
ITGB1-203ENST00000414670 LARP1Q6PKG0 1096 aaKnown RBP8.02□□□□□ -1.13
ITGB1-203ENST00000414670 NUTM2AQ8IVF1 878 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-203ENST00000414670 IL17REQ8NFR9 667 aa8.02□□□□□ -1.13
ITGB1-203ENST00000414670 MBIPQ9NS73 344 aa8.02□□□□□ -1.13
ITGB1-203ENST00000414670 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.02□□□□□ -1.134e-16■□□□□ 11.1
ITGB1-203ENST00000414670 SPG7Q9UQ90 795 aa8.02□□□□□ -1.13
ITGB1-203ENST00000414670 CRB1P82279 1406 aa8.02□□□□□ -1.13
ITGB1-203ENST00000414670 COL18A1P39060 1754 aa8.02□□□□□ -1.13
ITGB1-203ENST00000414670 COL22A1Q8NFW1 1626 aaPredicted RBP8.01□□□□□ -1.13
ITGB1-203ENST00000414670 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.01□□□□□ -1.13
ITGB1-203ENST00000414670 LMO7Q8WWI1 1683 aa8.01□□□□□ -1.13
ITGB1-203ENST00000414670 MEGF6O75095 1541 aa8□□□□□ -1.13
ITGB1-203ENST00000414670 IL2RBP14784 551 aa8□□□□□ -1.13
ITGB1-203ENST00000414670 RARSP54136 660 aaKnown RBP8□□□□□ -1.13
ITGB1-203ENST00000414670 TAF7Q15545 349 aaPredicted RBP8□□□□□ -1.13
ITGB1-203ENST00000414670 BABAM1Q9NWV8 329 aa8□□□□□ -1.13
ITGB1-203ENST00000414670 ZBTB47Q9UFB7 747 aaPredicted RBP8□□□□□ -1.13
ITGB1-203ENST00000414670 PHLPP1O60346 1717 aa8□□□□□ -1.13
ITGB1-203ENST00000414670 CEMIPQ8WUJ3 1361 aa7.99□□□□□ -1.13
ITGB1-203ENST00000414670 RNMTO43148 476 aaKnown RBP7.99□□□□□ -1.13
ITGB1-203ENST00000414670 BCAR3O75815 825 aa7.99□□□□□ -1.13
ITGB1-203ENST00000414670 PHKG2P15735 406 aa7.99□□□□□ -1.13
ITGB1-203ENST00000414670 HSPA1LP34931 641 aa7.99□□□□□ -1.13
ITGB1-203ENST00000414670 MPRIPQ6WCQ1 1025 aa7.99□□□□□ -1.13
ITGB1-203ENST00000414670 IFNL2Q8IZJ0 200 aa7.99□□□□□ -1.13
ITGB1-203ENST00000414670 ZCRB1Q8TBF4 217 aaKnown RBP7.99□□□□□ -1.13
ITGB1-203ENST00000414670 ZNF428Q96B54 188 aa7.99□□□□□ -1.13
ITGB1-203ENST00000414670 ABCA3Q99758 1704 aa7.99□□□□□ -1.13
ITGB1-203ENST00000414670 LGR6Q9HBX8 967 aa7.99□□□□□ -1.13
ITGB1-203ENST00000414670 MIS18AQ9NYP9 233 aa7.99□□□□□ -1.13
ITGB1-203ENST00000414670 TSPYL4Q9UJ04 414 aa7.99□□□□□ -1.13
ITGB1-203ENST00000414670 SPATA31A6Q5VVP1 1343 aa7.99□□□□□ -1.13
ITGB1-203ENST00000414670 OVOS2A0A0G2JMS6 1433 aa7.98□□□□□ -1.13
ITGB1-203ENST00000414670 PLIN1O60240 522 aa7.98□□□□□ -1.13
ITGB1-203ENST00000414670 VAMP4O75379 141 aa7.98□□□□□ -1.13
ITGB1-203ENST00000414670 HSP90AB1P08238 724 aaKnown RBP7.98□□□□□ -1.13
ITGB1-203ENST00000414670 ANP32AP39687 249 aaKnown RBP7.98□□□□□ -1.13
ITGB1-203ENST00000414670 TEFQ10587 303 aa7.98□□□□□ -1.13
ITGB1-203ENST00000414670 C8orf58Q8NAV2 365 aa7.98□□□□□ -1.13
ITGB1-203ENST00000414670 ELL2O00472 640 aaPredicted RBP7.97□□□□□ -1.13
ITGB1-203ENST00000414670 CYP27B1O15528 508 aa7.97□□□□□ -1.13
ITGB1-203ENST00000414670 CANXP27824 592 aaKnown RBP7.97□□□□□ -1.13
ITGB1-203ENST00000414670 TWISTNBQ3B726 338 aaPredicted RBP7.97□□□□□ -1.13
ITGB1-203ENST00000414670 ALDH1L2Q3SY69 923 aa7.97□□□□□ -1.13
ITGB1-203ENST00000414670 RTL5Q5HYW3 569 aaPredicted RBP7.97□□□□□ -1.13
ITGB1-203ENST00000414670 TSPYL6Q8N831 410 aa7.97□□□□□ -1.13
ITGB1-203ENST00000414670 UBE2Q2Q8WVN8 375 aa7.97□□□□□ -1.13
ITGB1-203ENST00000414670 SSH1Q8WYL5 1049 aa7.97□□□□□ -1.13
ITGB1-203ENST00000414670 NGLY1Q96IV0 654 aa7.97□□□□□ -1.13
ITGB1-203ENST00000414670 DCAF5Q96JK2 942 aa7.97□□□□□ -1.13
ITGB1-203ENST00000414670 BCL2L13Q9BXK5 485 aa7.97□□□□□ -1.13
ITGB1-203ENST00000414670 SMC4Q9NTJ3 1288 aa7.97□□□□□ -1.13
ITGB1-203ENST00000414670 FAM208AQ9UK61 1670 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms