RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 OVOS2A0A0G2JMS6 1433 aa40.89■■■■■ 4.14
CSNK1E-206ENST00000413574 EXOC5O00471 708 aa40.87■■■■■ 4.13
CSNK1E-206ENST00000413574 MRS2Q9HD23 443 aa40.87■■■■■ 4.13
CSNK1E-206ENST00000413574 SHANK3Q9BYB0 1731 aa40.86■■■■■ 4.13
CSNK1E-206ENST00000413574 EP400Q96L91 3159 aa40.85■■■■■ 4.13
CSNK1E-206ENST00000413574 MIER1Q8N108 512 aa40.85■■■■■ 4.13
CSNK1E-206ENST00000413574 TNS2Q63HR2 1409 aa40.84■■■■■ 4.13
CSNK1E-206ENST00000413574 FAM182BQ5T319 152 aa40.83■■■■■ 4.13
CSNK1E-206ENST00000413574 PKD1L3Q7Z443 1732 aa40.83■■■■■ 4.13
CSNK1E-206ENST00000413574 PDE3BQ13370 1112 aa40.82■■■■■ 4.13
CSNK1E-206ENST00000413574 KRT27Q7Z3Y8 459 aa40.82■■■■■ 4.13
CSNK1E-206ENST00000413574 ZCRB1Q8TBF4 217 aaKnown RBP40.82■■■■■ 4.13
CSNK1E-206ENST00000413574 RSPH6AQ9H0K4 717 aa40.82■■■■■ 4.13
CSNK1E-206ENST00000413574 WDR43Q15061 677 aaKnown RBP eCLIP40.78■■■■■ 4.12
CSNK1E-206ENST00000413574 DDX54Q8TDD1 881 aaKnown RBP40.78■■■■■ 4.12
CSNK1E-206ENST00000413574 PRKAR2BP31323 418 aa40.78■■■■■ 4.12
CSNK1E-206ENST00000413574 MARCH10Q8NA82 808 aaPredicted RBP40.78■■■■■ 4.12
CSNK1E-206ENST00000413574 FCHSD2O94868 740 aa40.76■■■■■ 4.12
CSNK1E-206ENST00000413574 ADAMTS8Q9UP79 889 aa40.75■■■■■ 4.11
CSNK1E-206ENST00000413574 SPG7Q9UQ90 795 aa40.74■■■■■ 4.11
CSNK1E-206ENST00000413574 PNISRQ8TF01 805 aaKnown RBP40.72■■■■■ 4.11
CSNK1E-206ENST00000413574 PHACTR3Q96KR7 559 aa40.72■■■■■ 4.11
CSNK1E-206ENST00000413574 PLEKHO1Q53GL0 409 aaPredicted RBP40.71■■■■■ 4.11
CSNK1E-206ENST00000413574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP40.71■■■■■ 4.11
CSNK1E-206ENST00000413574 CYP27B1O15528 508 aa40.71■■■■■ 4.11
CSNK1E-206ENST00000413574 PCDH11XQ9BZA7 1347 aa40.69■■■■■ 4.1
CSNK1E-206ENST00000413574 PCDH11YQ9BZA8 1340 aa40.69■■■■■ 4.1
CSNK1E-206ENST00000413574 PLEKHG2Q9H7P9 1386 aa40.68■■■■■ 4.1
CSNK1E-206ENST00000413574 AMOTQ4VCS5 1084 aa40.67■■■■■ 4.1
CSNK1E-206ENST00000413574 PLEKHF1Q96S99 279 aa40.67■■■■■ 4.1
CSNK1E-206ENST00000413574 CCER2I3L3R5 266 aa40.67■■■■■ 4.1
CSNK1E-206ENST00000413574 MTHFSDQ2M296 383 aaKnown RBP40.67■■■■■ 4.1
CSNK1E-206ENST00000413574 ZNF530Q6P9A1 599 aaPredicted RBP40.65■■■■■ 4.1
CSNK1E-206ENST00000413574 CCDC146Q8IYE0 955 aa40.65■■■■■ 4.1
CSNK1E-206ENST00000413574 PHKG2P15735 406 aa40.62■■■■■ 4.09
CSNK1E-206ENST00000413574 IFNL2Q8IZJ0 200 aa40.6■■■■■ 4.09
CSNK1E-206ENST00000413574 KAT6BQ8WYB5 2073 aa40.6■■■■■ 4.09
CSNK1E-206ENST00000413574 FAM9BQ8IZU0 186 aa40.6■■■■■ 4.09
CSNK1E-206ENST00000413574 SBF2Q86WG5 1849 aa40.59■■■■■ 4.09
CSNK1E-206ENST00000413574 PNNQ9H307 717 aaKnown RBP40.59■■■■■ 4.09
CSNK1E-206ENST00000413574 FAM196AQ6ZSG2 479 aa40.58■■■■■ 4.09
CSNK1E-206ENST00000413574 C1orf141Q5JVX7 400 aa40.56■■■■■ 4.08
CSNK1E-206ENST00000413574 MAPK8IP3Q9UPT6 1336 aa40.55■■■■■ 4.08
CSNK1E-206ENST00000413574 NEFMP07197 916 aa40.55■■■■■ 4.08
CSNK1E-206ENST00000413574 DOT1LQ8TEK3 1739 aa40.55■■■■■ 4.08
CSNK1E-206ENST00000413574 GAS2L2Q8NHY3 880 aa40.54■■■■■ 4.08
CSNK1E-206ENST00000413574 ACSBG1Q96GR2 724 aa40.54■■■■■ 4.08
CSNK1E-206ENST00000413574 DLG5Q8TDM6 1919 aa40.54■■■■■ 4.08
CSNK1E-206ENST00000413574 RUNDC1Q96C34 613 aa40.53■■■■■ 4.08
CSNK1E-206ENST00000413574 TOGARAM1Q9Y4F4 1720 aa40.53■■■■■ 4.08
CSNK1E-206ENST00000413574 VIRMAQ69YN4 1812 aaKnown RBP40.53■■■■■ 4.08
CSNK1E-206ENST00000413574 AKAP4Q5JQC9 854 aa40.53■■■■■ 4.08
CSNK1E-206ENST00000413574 NKX1-1Q15270 411 aaPredicted RBP40.52■■■■■ 4.08
CSNK1E-206ENST00000413574 BCL9O00512 1426 aa40.51■■■■■ 4.08
CSNK1E-206ENST00000413574 MPRIPQ6WCQ1 1025 aa40.51■■■■■ 4.08
CSNK1E-206ENST00000413574 PTF1AQ7RTS3 328 aa40.49■■■■■ 4.07
CSNK1E-206ENST00000413574 KDM6AO15550 1401 aaPredicted RBP40.48■■■■■ 4.07
CSNK1E-206ENST00000413574 KCNQ2O43526 872 aa40.48■■■■■ 4.07
CSNK1E-206ENST00000413574 TRIM37O94972 964 aa40.48■■■■■ 4.07
CSNK1E-206ENST00000413574 SCN11AQ9UI33 1791 aa40.46■■■■■ 4.07
CSNK1E-206ENST00000413574 MAP3K5Q99683 1374 aa40.46■■■■■ 4.07
CSNK1E-206ENST00000413574 NFE2L2Q16236 605 aa40.45■■■■■ 4.07
CSNK1E-206ENST00000413574 RRP7AQ9Y3A4 280 aaKnown RBP40.45■■■■■ 4.07
CSNK1E-206ENST00000413574 ITGB4P16144 1822 aa40.45■■■■■ 4.07
CSNK1E-206ENST00000413574 SENP3-EIF4A1A0A087X0R7 540 aa40.45■■■■■ 4.07
CSNK1E-206ENST00000413574 GNAT3A8MTJ3 354 aa40.45■■■■■ 4.07
CSNK1E-206ENST00000413574 HSP90AB1P08238 724 aaKnown RBP40.45■■■■■ 4.07
CSNK1E-206ENST00000413574 LGR6Q9HBX8 967 aa40.45■■■■■ 4.07
CSNK1E-206ENST00000413574 NHSQ6T4R5 1651 aa40.45■■■■■ 4.07
CSNK1E-206ENST00000413574 PRIM1P49642 420 aaKnown RBP40.44■■■■■ 4.06
CSNK1E-206ENST00000413574 DCAF5Q96JK2 942 aa40.44■■■■■ 4.06
CSNK1E-206ENST00000413574 SYTL4Q96C24 671 aaPredicted RBP40.43■■■■■ 4.06
CSNK1E-206ENST00000413574 TMPOP42166 694 aaKnown RBP40.42■■■■■ 4.06
CSNK1E-206ENST00000413574 APAF1O14727 1248 aa40.41■■■■■ 4.06
CSNK1E-206ENST00000413574 NEUROD2Q15784 382 aa40.41■■■■■ 4.06
CSNK1E-206ENST00000413574 TNS1Q9HBL0 1735 aaKnown RBP40.39■■■■■ 4.06
CSNK1E-206ENST00000413574 ADAMTS7Q9UKP4 1686 aa40.39■■■■■ 4.06
CSNK1E-206ENST00000413574 RNMTO43148 476 aaKnown RBP40.38■■■■■ 4.05
CSNK1E-206ENST00000413574 RIPK4P57078 832 aa40.38■■■■■ 4.05
CSNK1E-206ENST00000413574 IL17REQ8NFR9 667 aa40.38■■■■■ 4.05
CSNK1E-206ENST00000413574 DCTN1Q14203 1278 aa40.37■■■■■ 4.05
CSNK1E-206ENST00000413574 UPF1Q92900 1129 aaKnown RBP eCLIP40.37■■■■■ 4.05
CSNK1E-206ENST00000413574 BTAF1O14981 1849 aa40.36■■■■■ 4.05
CSNK1E-206ENST00000413574 MCM10Q7L590 875 aa40.36■■■■■ 4.05
CSNK1E-206ENST00000413574 BCL11BQ9C0K0 894 aaPredicted RBP40.36■■■■■ 4.05
CSNK1E-206ENST00000413574 RTF1Q92541 710 aaKnown RBP40.34■■■■■ 4.05
CSNK1E-206ENST00000413574 ERVV-2B6SEH9 535 aa40.32■■■■■ 4.05
CSNK1E-206ENST00000413574 CABP4P57796 275 aa40.31■■■■■ 4.04
CSNK1E-206ENST00000413574 NFATC2IPQ8NCF5 419 aa40.3■■■■■ 4.04
CSNK1E-206ENST00000413574 PIGBQ92521 554 aa40.3■■■■■ 4.04
CSNK1E-206ENST00000413574 TMOD3Q9NYL9 352 aa40.3■■■■■ 4.04
CSNK1E-206ENST00000413574 HTATSF1O43719 755 aaKnown RBP40.29■■■■■ 4.04
CSNK1E-206ENST00000413574 THUMPD2Q9BTF0 503 aaKnown RBP40.29■■■■■ 4.04
CSNK1E-206ENST00000413574 CEMIPQ8WUJ3 1361 aa40.28■■■■■ 4.04
CSNK1E-206ENST00000413574 TRIM35Q9UPQ4 493 aa40.27■■■■■ 4.04
CSNK1E-206ENST00000413574 APBA3O96018 575 aa40.27■■■■■ 4.04
CSNK1E-206ENST00000413574 MRC1P22897 1456 aa40.26■■■■■ 4.04
CSNK1E-206ENST00000413574 SLC52A2Q9HAB3 445 aa40.26■■■■■ 4.04
CSNK1E-206ENST00000413574 SIPA1L3O60292 1781 aaPredicted RBP40.25■■■■■ 4.03
CSNK1E-206ENST00000413574 SF3B2Q13435 895 aaKnown RBP40.24■■■■■ 4.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms