RNA–Protein interactions for RNA: ENST00000412922.6

COPS7B-209, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 5

Gene COPS7B, Length 1,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-209ENST00000412922 TMF1P82094 1093 aa17.03■□□□□ 0.32
COPS7B-209ENST00000412922 DDX54Q8TDD1 881 aaKnown RBP17.03■□□□□ 0.32
COPS7B-209ENST00000412922 SLC16A10Q8TF71 515 aa17.03■□□□□ 0.32
COPS7B-209ENST00000412922 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
COPS7B-209ENST00000412922 MEGF6O75095 1541 aa17.03■□□□□ 0.32
COPS7B-209ENST00000412922 ZNF827Q17R98 1081 aa17.02■□□□□ 0.32
COPS7B-209ENST00000412922 ARXQ96QS3 562 aa17.02■□□□□ 0.32
COPS7B-209ENST00000412922 USP47Q96K76 1375 aa17.02■□□□□ 0.31
COPS7B-209ENST00000412922 CDCA8Q53HL2 280 aa17.02■□□□□ 0.31
COPS7B-209ENST00000412922 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
COPS7B-209ENST00000412922 LRRC4BQ9NT99 713 aa17.01■□□□□ 0.31
COPS7B-209ENST00000412922 ZCRB1Q8TBF4 217 aaKnown RBP17■□□□□ 0.31
COPS7B-209ENST00000412922 AKT1S1Q96B36 256 aa17■□□□□ 0.31
COPS7B-209ENST00000412922 HMGB2P26583 209 aaKnown RBP17■□□□□ 0.31
COPS7B-209ENST00000412922 SYTL4Q96C24 671 aaPredicted RBP17■□□□□ 0.31
COPS7B-209ENST00000412922 POLD1P28340 1107 aa16.99■□□□□ 0.31
COPS7B-209ENST00000412922 NSD2O96028 1365 aa16.99■□□□□ 0.31
COPS7B-209ENST00000412922 FLT4P35916 1363 aa16.98■□□□□ 0.31
COPS7B-209ENST00000412922 RAPGEF4Q8WZA2 1011 aa16.98■□□□□ 0.31
COPS7B-209ENST00000412922 INSRP06213 1382 aa16.97■□□□□ 0.31
COPS7B-209ENST00000412922 PNPLA7Q6ZV29 1317 aa16.97■□□□□ 0.31
COPS7B-209ENST00000412922 PRIM1P49642 420 aaKnown RBP16.96■□□□□ 0.31
COPS7B-209ENST00000412922 TFCP2L1Q9NZI6 479 aa16.96■□□□□ 0.31
COPS7B-209ENST00000412922 C5P01031 1676 aa16.96■□□□□ 0.31
COPS7B-209ENST00000412922 FYB1O15117 783 aa16.96■□□□□ 0.3
COPS7B-209ENST00000412922 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.3
COPS7B-209ENST00000412922 PCDH11XQ9BZA7 1347 aa16.95■□□□□ 0.3
COPS7B-209ENST00000412922 PCDH11YQ9BZA8 1340 aa16.95■□□□□ 0.3
COPS7B-209ENST00000412922 ANKRD26Q9UPS8 1709 aa16.95■□□□□ 0.3
COPS7B-209ENST00000412922 GGNBP2Q9H3C7 697 aa16.95■□□□□ 0.3
COPS7B-209ENST00000412922 PKD1L3Q7Z443 1732 aa16.95■□□□□ 0.3
COPS7B-209ENST00000412922 TATP17735 454 aaPredicted RBP16.94■□□□□ 0.3
COPS7B-209ENST00000412922 CCNL1Q9UK58 526 aaPredicted RBP16.94■□□□□ 0.3
COPS7B-209ENST00000412922 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
COPS7B-209ENST00000412922 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
COPS7B-209ENST00000412922 ZNF784Q8NCA9 323 aaPredicted RBP16.93■□□□□ 0.3
COPS7B-209ENST00000412922 FBLN1P23142 703 aa16.92■□□□□ 0.3
COPS7B-209ENST00000412922 TAF1LQ8IZX4 1826 aa16.91■□□□□ 0.3
COPS7B-209ENST00000412922 NSD3Q9BZ95 1437 aa16.91■□□□□ 0.3
COPS7B-209ENST00000412922 CENPBP07199 599 aaPredicted RBP16.9■□□□□ 0.3
COPS7B-209ENST00000412922 GPR162Q16538 588 aa16.9■□□□□ 0.3
COPS7B-209ENST00000412922 USHBP1Q8N6Y0 703 aa16.9■□□□□ 0.3
COPS7B-209ENST00000412922 TOGARAM1Q9Y4F4 1720 aa16.9■□□□□ 0.3
COPS7B-209ENST00000412922 KLHL34Q8N239 644 aa16.9■□□□□ 0.3
COPS7B-209ENST00000412922 NCAPD2Q15021 1401 aa16.9■□□□□ 0.3
COPS7B-209ENST00000412922 ITGB4P16144 1822 aa16.89■□□□□ 0.29
COPS7B-209ENST00000412922 HSP90AB2PQ58FF8 381 aa16.88■□□□□ 0.29
COPS7B-209ENST00000412922 TIMELESSQ9UNS1 1208 aa16.88■□□□□ 0.29
COPS7B-209ENST00000412922 UTRNP46939 3433 aa16.88■□□□□ 0.29
COPS7B-209ENST00000412922 PALLDQ8WX93 1383 aa16.88■□□□□ 0.29
COPS7B-209ENST00000412922 KCNQ4P56696 695 aa16.88■□□□□ 0.29
COPS7B-209ENST00000412922 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
COPS7B-209ENST00000412922 C4BP0C0L5 1744 aa16.87■□□□□ 0.29
COPS7B-209ENST00000412922 SMARCC1Q92922 1105 aaPredicted RBP16.86■□□□□ 0.29
COPS7B-209ENST00000412922 PLEKHG2Q9H7P9 1386 aa16.86■□□□□ 0.29
COPS7B-209ENST00000412922 MSH5O43196 834 aa16.86■□□□□ 0.29
COPS7B-209ENST00000412922 MAP2P11137 1827 aaKnown RBP16.84■□□□□ 0.29
COPS7B-209ENST00000412922 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
COPS7B-209ENST00000412922 COL23A1Q86Y22 540 aaPredicted RBP16.84■□□□□ 0.29
COPS7B-209ENST00000412922 EMILIN1Q9Y6C2 1016 aa16.84■□□□□ 0.29
COPS7B-209ENST00000412922 SPG7Q9UQ90 795 aa16.83■□□□□ 0.28
COPS7B-209ENST00000412922 UBR3Q6ZT12 1888 aa16.83■□□□□ 0.28
COPS7B-209ENST00000412922 CYP27B1O15528 508 aa16.82■□□□□ 0.28
COPS7B-209ENST00000412922 GRIN3BO60391 1043 aa16.82■□□□□ 0.28
COPS7B-209ENST00000412922 MPRIPQ6WCQ1 1025 aa16.82■□□□□ 0.28
COPS7B-209ENST00000412922 CARD14Q9BXL6 1004 aa16.82■□□□□ 0.28
COPS7B-209ENST00000412922 NLGN2Q8NFZ4 835 aa16.82■□□□□ 0.28
COPS7B-209ENST00000412922 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
COPS7B-209ENST00000412922 AK7Q96M32 723 aa16.81■□□□□ 0.28
COPS7B-209ENST00000412922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.81■□□□□ 0.288e-10■■■□□ 14.8
COPS7B-209ENST00000412922 NKX1-1Q15270 411 aaPredicted RBP16.8■□□□□ 0.28
COPS7B-209ENST00000412922 PPM1GO15355 546 aaPredicted RBP16.8■□□□□ 0.28
COPS7B-209ENST00000412922 CD2APQ9Y5K6 639 aa16.79■□□□□ 0.28
COPS7B-209ENST00000412922 C1QTNF8P60827 252 aa16.78■□□□□ 0.28
COPS7B-209ENST00000412922 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
COPS7B-209ENST00000412922 GIGYF1O75420 1035 aaPredicted RBP16.77■□□□□ 0.28
COPS7B-209ENST00000412922 TMOD3Q9NYL9 352 aa16.77■□□□□ 0.28
COPS7B-209ENST00000412922 ZNF831Q5JPB2 1677 aa16.77■□□□□ 0.27
COPS7B-209ENST00000412922 SSFA2P28290 1259 aa16.76■□□□□ 0.27
COPS7B-209ENST00000412922 IFNL2Q8IZJ0 200 aa16.76■□□□□ 0.27
COPS7B-209ENST00000412922 PIGBQ92521 554 aa16.76■□□□□ 0.27
COPS7B-209ENST00000412922 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
COPS7B-209ENST00000412922 EYA1Q99502 592 aa16.75■□□□□ 0.27
COPS7B-209ENST00000412922 LOC102724428A0A0B4J2F2 783 aa16.74■□□□□ 0.27
COPS7B-209ENST00000412922 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
COPS7B-209ENST00000412922 SIK1P57059 783 aa16.74■□□□□ 0.27
COPS7B-209ENST00000412922 GOLGB1Q14789 3259 aaKnown RBP16.74■□□□□ 0.27
COPS7B-209ENST00000412922 POLKQ9UBT6 870 aa16.74■□□□□ 0.27
COPS7B-209ENST00000412922 PHKG2P15735 406 aa16.73■□□□□ 0.27
COPS7B-209ENST00000412922 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.72■□□□□ 0.27
COPS7B-209ENST00000412922 PHF14O94880 888 aa16.72■□□□□ 0.27
COPS7B-209ENST00000412922 IGSF1Q8N6C5 1336 aa16.71■□□□□ 0.27
COPS7B-209ENST00000412922 EIF4A2Q14240 407 aaKnown RBP16.71■□□□□ 0.27
COPS7B-209ENST00000412922 HSP90AB1P08238 724 aaKnown RBP16.7■□□□□ 0.26
COPS7B-209ENST00000412922 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
COPS7B-209ENST00000412922 COL5A3P25940 1745 aaPredicted RBP16.7■□□□□ 0.26
COPS7B-209ENST00000412922 KDRP35968 1356 aa16.7■□□□□ 0.26
COPS7B-209ENST00000412922 LINC00116Q8NCU8 138 aa16.7■□□□□ 0.26
COPS7B-209ENST00000412922 GTF3C3Q9Y5Q9 886 aa16.7■□□□□ 0.26
COPS7B-209ENST00000412922 ATP10DQ9P241 1426 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms