RNA–Protein interactions for RNA: ENST00000412870.1

CASKP1-201, Transcript of calcium/calmodulin dependent serine protein kinase pseudogene 1, humanhuman

BASIC

Gene CASKP1, Length 582 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKP1-201ENST00000412870 USP17L12C9JPN9 530 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 USP17L11C9JVI0 530 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 USP17L21D6R901 530 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 USP17L18D6R9N7 530 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 USP17L22D6RA61 530 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 USP17L17D6RBQ6 530 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 USP17L19D6RCP7 530 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 USP17L20D6RJB6 530 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 BMP1P13497 986 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 KCNA1Q09470 495 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 USP17L24Q0WX57 530 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 ERFEQ4G0M1 354 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 ZNF511Q8NB15 262 aa11.27□□□□□ -0.61
CASKP1-201ENST00000412870 FAM196BA6NMK8 535 aa11.26□□□□□ -0.61
CASKP1-201ENST00000412870 CCDC85AQ96PX6 553 aaPredicted RBP11.26□□□□□ -0.61
CASKP1-201ENST00000412870 NXF1Q9UBU9 619 aaKnown RBP11.26□□□□□ -0.61
CASKP1-201ENST00000412870 PTK7Q13308 1070 aa11.25□□□□□ -0.61
CASKP1-201ENST00000412870 TRIM46Q7Z4K8 759 aa11.25□□□□□ -0.61
CASKP1-201ENST00000412870 BPHLQ86WA6 291 aaPredicted RBP11.25□□□□□ -0.61
CASKP1-201ENST00000412870 GIGYF1O75420 1035 aaPredicted RBP11.24□□□□□ -0.61
CASKP1-201ENST00000412870 MAP7D1Q3KQU3 841 aa11.24□□□□□ -0.61
CASKP1-201ENST00000412870 ZSCAN1Q8NBB4 408 aa11.24□□□□□ -0.61
CASKP1-201ENST00000412870 PATL2C9JE40 543 aaKnown RBP11.23□□□□□ -0.61
CASKP1-201ENST00000412870 ATP5J2-PTCD1G3V325 749 aa11.23□□□□□ -0.61
CASKP1-201ENST00000412870 LZTS3O60299 673 aaPredicted RBP11.23□□□□□ -0.61
CASKP1-201ENST00000412870 ALDH1A1P00352 501 aa11.23□□□□□ -0.61
CASKP1-201ENST00000412870 RASA1P20936 1047 aa11.23□□□□□ -0.61
CASKP1-201ENST00000412870 AGERQ15109 404 aa11.23□□□□□ -0.61
CASKP1-201ENST00000412870 SLC16A10Q8TF71 515 aa11.23□□□□□ -0.61
CASKP1-201ENST00000412870 C1QTNF2Q9BXJ5 285 aa11.23□□□□□ -0.61
CASKP1-201ENST00000412870 SH3BP2P78314 561 aa11.22□□□□□ -0.61
CASKP1-201ENST00000412870 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
CASKP1-201ENST00000412870 EML3Q32P44 896 aa11.22□□□□□ -0.61
CASKP1-201ENST00000412870 LARP1Q6PKG0 1096 aaKnown RBP11.22□□□□□ -0.61
CASKP1-201ENST00000412870 CLDN10P78369 228 aa11.21□□□□□ -0.61
CASKP1-201ENST00000412870 TMCO4Q5TGY1 634 aa11.21□□□□□ -0.61
CASKP1-201ENST00000412870 SLAIN2Q9P270 581 aa11.21□□□□□ -0.61
CASKP1-201ENST00000412870 OGFOD1Q8N543 542 aa11.2□□□□□ -0.62
CASKP1-201ENST00000412870 SLC10A4Q96EP9 437 aa11.2□□□□□ -0.62
CASKP1-201ENST00000412870 DOLKQ9UPQ8 538 aa11.2□□□□□ -0.62
CASKP1-201ENST00000412870 IVNS1ABPQ9Y6Y0 642 aa11.2□□□□□ -0.62
CASKP1-201ENST00000412870 FAM181BA6NEQ2 426 aa11.19□□□□□ -0.62
CASKP1-201ENST00000412870 WNT7BP56706 349 aa11.19□□□□□ -0.62
CASKP1-201ENST00000412870 FAM69CQ0P6D2 419 aa11.19□□□□□ -0.62
CASKP1-201ENST00000412870 ANKMY2Q8IV38 441 aa11.19□□□□□ -0.62
CASKP1-201ENST00000412870 ESPNB1AK53 854 aa11.18□□□□□ -0.62
CASKP1-201ENST00000412870 OXLD1Q5BKU9 147 aa11.18□□□□□ -0.62
CASKP1-201ENST00000412870 CDCA7Q9BWT1 371 aaPredicted RBP11.18□□□□□ -0.62
CASKP1-201ENST00000412870 KIAA1024Q9UPX6 916 aa11.18□□□□□ -0.62
CASKP1-201ENST00000412870 H3BM21 787 aa11.17□□□□□ -0.62
CASKP1-201ENST00000412870 SIAH2O43255 324 aa11.17□□□□□ -0.62
CASKP1-201ENST00000412870 DPYDQ12882 1025 aa11.17□□□□□ -0.62
CASKP1-201ENST00000412870 PHLDB3Q6NSJ2 640 aa11.17□□□□□ -0.62
CASKP1-201ENST00000412870 TRMT44Q8IYL2 757 aaKnown RBP11.17□□□□□ -0.62
CASKP1-201ENST00000412870 FAM200AQ8TCP9 573 aa11.17□□□□□ -0.62
CASKP1-201ENST00000412870 IRF7Q92985 503 aa11.17□□□□□ -0.62
CASKP1-201ENST00000412870 ZNF594Q96JF6 807 aaPredicted RBP11.17□□□□□ -0.62
CASKP1-201ENST00000412870 NOD1Q9Y239 953 aa11.17□□□□□ -0.62
CASKP1-201ENST00000412870 DKK1O94907 266 aa11.16□□□□□ -0.62
CASKP1-201ENST00000412870 TRIM50Q86XT4 487 aa11.16□□□□□ -0.62
CASKP1-201ENST00000412870 DNAAF2Q9NVR5 837 aaKnown RBP11.16□□□□□ -0.62
CASKP1-201ENST00000412870 ZBTB7BO15156 539 aaPredicted RBP11.15□□□□□ -0.62
CASKP1-201ENST00000412870 CAPN5O15484 640 aaPredicted RBP11.15□□□□□ -0.62
CASKP1-201ENST00000412870 MFAP1P55081 439 aaKnown RBP11.15□□□□□ -0.62
CASKP1-201ENST00000412870 NBPF20Q3BBV1 942 aa11.14□□□□□ -0.63
CASKP1-201ENST00000412870 RNF20Q5VTR2 975 aa11.14□□□□□ -0.63
CASKP1-201ENST00000412870 ATP1A2P50993 1020 aa11.13□□□□□ -0.63
CASKP1-201ENST00000412870 GTF2IP78347 998 aa11.13□□□□□ -0.63
CASKP1-201ENST00000412870 B4GALNT3Q6L9W6 998 aa11.13□□□□□ -0.63
CASKP1-201ENST00000412870 NPM2Q86SE8 214 aaKnown RBP11.13□□□□□ -0.63
CASKP1-201ENST00000412870 LARGE2Q8N3Y3 721 aa11.13□□□□□ -0.63
CASKP1-201ENST00000412870 CLP1Q92989 425 aaKnown RBP11.13□□□□□ -0.63
CASKP1-201ENST00000412870 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
CASKP1-201ENST00000412870 PCDHB11Q9Y5F2 797 aa11.13□□□□□ -0.63
CASKP1-201ENST00000412870 SSFA2P28290 1259 aa11.12□□□□□ -0.63
CASKP1-201ENST00000412870 NPAS3Q8IXF0 933 aa11.12□□□□□ -0.63
CASKP1-201ENST00000412870 SIX5Q8N196 739 aa11.12□□□□□ -0.63
CASKP1-201ENST00000412870 RGS22Q8NE09 1264 aa11.12□□□□□ -0.63
CASKP1-201ENST00000412870 SEPT12Q8IYM1 358 aa11.11□□□□□ -0.63
CASKP1-201ENST00000412870 EHBP1Q8NDI1 1231 aa11.11□□□□□ -0.63
CASKP1-201ENST00000412870 CDV3Q9UKY7 258 aaKnown RBP11.11□□□□□ -0.63
CASKP1-201ENST00000412870 PCDHGA11Q9Y5H2 935 aa11.11□□□□□ -0.63
CASKP1-201ENST00000412870 TXNDC2Q86VQ3 553 aa11.1□□□□□ -0.63
CASKP1-201ENST00000412870 ZFP42Q96MM3 310 aa11.1□□□□□ -0.63
CASKP1-201ENST00000412870 KCTD15Q96SI1 283 aaPredicted RBP11.1□□□□□ -0.63
CASKP1-201ENST00000412870 MTMR7Q9Y216 660 aa11.1□□□□□ -0.63
CASKP1-201ENST00000412870 RAB15P59190 212 aa11.09□□□□□ -0.63
CASKP1-201ENST00000412870 WASF2Q9Y6W5 498 aa11.09□□□□□ -0.63
CASKP1-201ENST00000412870 VARSP26640 1264 aaKnown RBP11.08□□□□□ -0.64
CASKP1-201ENST00000412870 SWI5Q1ZZU3 235 aa11.08□□□□□ -0.64
CASKP1-201ENST00000412870 INTS6LQ5JSJ4 861 aaKnown RBP11.08□□□□□ -0.64
CASKP1-201ENST00000412870 CCDC102BQ68D86 513 aa11.08□□□□□ -0.64
CASKP1-201ENST00000412870 SND1Q7KZF4 910 aaKnown RBP eCLIP11.08□□□□□ -0.64
CASKP1-201ENST00000412870 SFI1A8K8P3 1242 aa11.07□□□□□ -0.64
CASKP1-201ENST00000412870 ATP2B4P23634 1241 aa11.07□□□□□ -0.64
CASKP1-201ENST00000412870 SUZ12Q15022 739 aaKnown RBP11.07□□□□□ -0.64
CASKP1-201ENST00000412870 TPCN2Q8NHX9 752 aa11.07□□□□□ -0.64
CASKP1-201ENST00000412870 MAP4K5Q9Y4K4 846 aa11.07□□□□□ -0.64
CASKP1-201ENST00000412870 SOBPA7XYQ1 873 aa11.06□□□□□ -0.64
CASKP1-201ENST00000412870 SEC13P55735 322 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms