RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 RTF1Q92541 710 aaKnown RBP20.73■□□□□ 0.91
HCG18-233ENST00000412685 GCC1Q96CN9 775 aa20.73■□□□□ 0.91
HCG18-233ENST00000412685 MARF1Q9Y4F3 1742 aaKnown RBP20.73■□□□□ 0.91
HCG18-233ENST00000412685 ABTB2Q8N961 1025 aa20.72■□□□□ 0.91
HCG18-233ENST00000412685 CHD2O14647 1828 aaKnown RBP20.72■□□□□ 0.91
HCG18-233ENST00000412685 SIRT2Q8IXJ6 389 aa20.72■□□□□ 0.91
HCG18-233ENST00000412685 HOXC9P31274 260 aa20.71■□□□□ 0.91
HCG18-233ENST00000412685 GAS2L2Q8NHY3 880 aa20.71■□□□□ 0.91
HCG18-233ENST00000412685 USP54Q70EL1 1684 aa20.71■□□□□ 0.91
HCG18-233ENST00000412685 BECN1Q14457 450 aa20.71■□□□□ 0.91
HCG18-233ENST00000412685 ZNF142P52746 1687 aaPredicted RBP20.7■□□□□ 0.9
HCG18-233ENST00000412685 RGS12O14924 1447 aa20.7■□□□□ 0.9
HCG18-233ENST00000412685 INTS3Q68E01 1043 aaKnown RBP20.7■□□□□ 0.9
HCG18-233ENST00000412685 PHF8Q9UPP1 1060 aa20.7■□□□□ 0.9
HCG18-233ENST00000412685 MIS18AQ9NYP9 233 aa20.69■□□□□ 0.9
HCG18-233ENST00000412685 ANKRD45Q5TZF3 282 aa20.69■□□□□ 0.9
HCG18-233ENST00000412685 TSPYL4Q9UJ04 414 aa20.68■□□□□ 0.9
HCG18-233ENST00000412685 PTPRCP08575 1304 aa20.67■□□□□ 0.9
HCG18-233ENST00000412685 NFKBIBQ15653 356 aa20.67■□□□□ 0.9
HCG18-233ENST00000412685 RBM33Q96EV2 1170 aaKnown RBP20.67■□□□□ 0.9
HCG18-233ENST00000412685 C14orf37Q86TY3 774 aa20.66■□□□□ 0.9
HCG18-233ENST00000412685 NWD1Q149M9 1564 aa20.66■□□□□ 0.9
HCG18-233ENST00000412685 MFAP1P55081 439 aaKnown RBP20.66■□□□□ 0.9
HCG18-233ENST00000412685 HTATSF1O43719 755 aaKnown RBP20.65■□□□□ 0.9
HCG18-233ENST00000412685 SLC4A2P04920 1241 aa20.64■□□□□ 0.9
HCG18-233ENST00000412685 C22orf23Q9BZE7 217 aa20.64■□□□□ 0.9
HCG18-233ENST00000412685 BMP2KLQ5H9B9 411 aa20.64■□□□□ 0.89
HCG18-233ENST00000412685 ADGRL3Q9HAR2 1447 aa20.64■□□□□ 0.89
HCG18-233ENST00000412685 RTL1A6NKG5 1358 aa20.63■□□□□ 0.89
HCG18-233ENST00000412685 LTV1Q96GA3 475 aaPredicted RBP20.63■□□□□ 0.89
HCG18-233ENST00000412685 ADAMTSL3P82987 1691 aa20.63■□□□□ 0.89
HCG18-233ENST00000412685 GNAT3A8MTJ3 354 aa20.63■□□□□ 0.89
HCG18-233ENST00000412685 SETD1BQ9UPS6 1966 aaKnown RBP20.62■□□□□ 0.89
HCG18-233ENST00000412685 LRRC37A3O60309 1634 aa20.62■□□□□ 0.89
HCG18-233ENST00000412685 MSH6P52701 1360 aa20.62■□□□□ 0.89
HCG18-233ENST00000412685 TBC1D2Q9BYX2 928 aa20.61■□□□□ 0.89
HCG18-233ENST00000412685 ATP10DQ9P241 1426 aa20.61■□□□□ 0.89
HCG18-233ENST00000412685 ESCO1Q5FWF5 840 aa20.6■□□□□ 0.89
HCG18-233ENST00000412685 DCTPP1Q9H773 170 aa20.6■□□□□ 0.89
HCG18-233ENST00000412685 MAP3K5Q99683 1374 aa20.6■□□□□ 0.89
HCG18-233ENST00000412685 PSME1Q06323 249 aa20.59■□□□□ 0.89
HCG18-233ENST00000412685 ANKRD44Q8N8A2 993 aa20.59■□□□□ 0.89
HCG18-233ENST00000412685 LTN1O94822 1766 aa20.59■□□□□ 0.89
HCG18-233ENST00000412685 IP6K1Q92551 441 aa20.58■□□□□ 0.89
HCG18-233ENST00000412685 NPHP4O75161 1426 aaPredicted RBP20.58■□□□□ 0.89
HCG18-233ENST00000412685 NFAT5O94916 1531 aa20.58■□□□□ 0.88
HCG18-233ENST00000412685 G2E3Q7L622 706 aa20.58■□□□□ 0.88
HCG18-233ENST00000412685 RPAP2Q8IXW5 612 aaPredicted RBP20.58■□□□□ 0.88
HCG18-233ENST00000412685 CEP85Q6P2H3 762 aa20.57■□□□□ 0.88
HCG18-233ENST00000412685 IL17REQ8NFR9 667 aa20.57■□□□□ 0.88
HCG18-233ENST00000412685 MEIS3Q99687 375 aa20.57■□□□□ 0.88
HCG18-233ENST00000412685 USHBP1Q8N6Y0 703 aa20.57■□□□□ 0.88
HCG18-233ENST00000412685 STK31Q9BXU1 1019 aa20.56■□□□□ 0.88
HCG18-233ENST00000412685 SLKQ9H2G2 1235 aaPredicted RBP20.56■□□□□ 0.88
HCG18-233ENST00000412685 FRAT2O75474 233 aaPredicted RBP20.55■□□□□ 0.88
HCG18-233ENST00000412685 KCNH5Q8NCM2 988 aa20.54■□□□□ 0.88
HCG18-233ENST00000412685 F6X3S4 739 aa20.54■□□□□ 0.88
HCG18-233ENST00000412685 CCT4P50991 539 aaKnown RBP20.54■□□□□ 0.88
HCG18-233ENST00000412685 TAF7Q15545 349 aaPredicted RBP20.54■□□□□ 0.88
HCG18-233ENST00000412685 ANTXR1Q9H6X2 564 aa20.54■□□□□ 0.88
HCG18-233ENST00000412685 BABAM1Q9NWV8 329 aa20.54■□□□□ 0.88
HCG18-233ENST00000412685 RBM25P49756 843 aaKnown RBP20.53■□□□□ 0.88
HCG18-233ENST00000412685 CCDC30Q5VVM6 783 aa20.53■□□□□ 0.88
HCG18-233ENST00000412685 SLC4A10Q6U841 1118 aa20.53■□□□□ 0.88
HCG18-233ENST00000412685 NBPF6Q5VWK0 638 aa20.52■□□□□ 0.88
HCG18-233ENST00000412685 PLEKHM2Q8IWE5 1019 aa20.52■□□□□ 0.88
HCG18-233ENST00000412685 NBPF4Q96M43 638 aa20.52■□□□□ 0.88
HCG18-233ENST00000412685 SOS1Q07889 1333 aaPredicted RBP20.52■□□□□ 0.87
HCG18-233ENST00000412685 TBC1D9Q6ZT07 1266 aa20.51■□□□□ 0.87
HCG18-233ENST00000412685 ORAI2Q96SN7 254 aa20.51■□□□□ 0.87
HCG18-233ENST00000412685 FAM208AQ9UK61 1670 aaKnown RBP20.51■□□□□ 0.87
HCG18-233ENST00000412685 FLIIQ13045 1269 aa20.5■□□□□ 0.87
HCG18-233ENST00000412685 ZBTB7CA1YPR0 619 aa20.5■□□□□ 0.87
HCG18-233ENST00000412685 GSPT1P15170 499 aaKnown RBP20.49■□□□□ 0.87
HCG18-233ENST00000412685 PHRF1Q9P1Y6 1649 aaKnown RBP20.49■□□□□ 0.87
HCG18-233ENST00000412685 NECTIN2Q92692 538 aa20.49■□□□□ 0.87
HCG18-233ENST00000412685 CEMIPQ8WUJ3 1361 aa20.49■□□□□ 0.87
HCG18-233ENST00000412685 FKBP5Q13451 457 aaPredicted RBP20.48■□□□□ 0.87
HCG18-233ENST00000412685 CDC45O75419 566 aa20.48■□□□□ 0.87
HCG18-233ENST00000412685 XPCQ01831 940 aaPredicted RBP20.48■□□□□ 0.87
HCG18-233ENST00000412685 C16orf71Q8IYS4 520 aaPredicted RBP20.48■□□□□ 0.87
HCG18-233ENST00000412685 HMMRO75330 724 aa20.47■□□□□ 0.87
HCG18-233ENST00000412685 GCP02774 474 aa20.46■□□□□ 0.87
HCG18-233ENST00000412685 TTC22Q5TAA0 569 aa20.46■□□□□ 0.87
HCG18-233ENST00000412685 CACNA1FO60840 1977 aa20.46■□□□□ 0.87
HCG18-233ENST00000412685 PRKCSHP14314 528 aaPredicted RBP20.45■□□□□ 0.86
HCG18-233ENST00000412685 GSE1Q14687 1217 aa20.45■□□□□ 0.86
HCG18-233ENST00000412685 HSCBQ8IWL3 235 aa20.45■□□□□ 0.86
HCG18-233ENST00000412685 OTUD7AQ8TE49 926 aaPredicted RBP20.45■□□□□ 0.86
HCG18-233ENST00000412685 LRRC59Q96AG4 307 aaKnown RBP20.45■□□□□ 0.86
HCG18-233ENST00000412685 APBB1O00213 710 aa20.45■□□□□ 0.86
HCG18-233ENST00000412685 GNAI2P04899 355 aa20.45■□□□□ 0.86
HCG18-233ENST00000412685 ARHGEF25Q86VW2 580 aa20.45■□□□□ 0.86
HCG18-233ENST00000412685 SPRYD3Q8NCJ5 442 aa20.45■□□□□ 0.86
HCG18-233ENST00000412685 SMARCA5O60264 1052 aaPredicted RBP20.44■□□□□ 0.86
HCG18-233ENST00000412685 SLIT3O75094 1523 aa20.44■□□□□ 0.86
HCG18-233ENST00000412685 RGPD2P0DJD1 1756 aa20.44■□□□□ 0.86
HCG18-233ENST00000412685 MED1Q15648 1581 aaPredicted RBP20.44■□□□□ 0.86
HCG18-233ENST00000412685 HDGFL1Q5TGJ6 251 aa20.43■□□□□ 0.86
HCG18-233ENST00000412685 PROSER2Q86WR7 435 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms