RNA–Protein interactions for RNA: ENST00000412074.6

CHRNB4-202, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNB4, Length 1,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-202ENST00000412074 THSD7AQ9UPZ6 1657 aa24.34■■□□□ 1.49
CHRNB4-202ENST00000412074 MARCH10Q8NA82 808 aaPredicted RBP24.32■■□□□ 1.48
CHRNB4-202ENST00000412074 WDR43Q15061 677 aaKnown RBP eCLIP24.31■■□□□ 1.48
CHRNB4-202ENST00000412074 RGPD1P0DJD0 1748 aa24.31■■□□□ 1.48
CHRNB4-202ENST00000412074 OVOS2A0A0G2JMS6 1433 aa24.31■■□□□ 1.48
CHRNB4-202ENST00000412074 KDRP35968 1356 aa24.31■■□□□ 1.48
CHRNB4-202ENST00000412074 PLEKHO1Q53GL0 409 aaPredicted RBP24.3■■□□□ 1.48
CHRNB4-202ENST00000412074 MIER1Q8N108 512 aa24.3■■□□□ 1.48
CHRNB4-202ENST00000412074 SPG7Q9UQ90 795 aa24.3■■□□□ 1.48
CHRNB4-202ENST00000412074 PRKAR2BP31323 418 aa24.29■■□□□ 1.48
CHRNB4-202ENST00000412074 RSPH6AQ9H0K4 717 aa24.29■■□□□ 1.48
CHRNB4-202ENST00000412074 BRWD3Q6RI45 1802 aa24.29■■□□□ 1.48
CHRNB4-202ENST00000412074 FCHSD2O94868 740 aa24.29■■□□□ 1.48
CHRNB4-202ENST00000412074 WNK3Q9BYP7 1800 aa24.28■■□□□ 1.48
CHRNB4-202ENST00000412074 TNS2Q63HR2 1409 aa24.28■■□□□ 1.48
CHRNB4-202ENST00000412074 PARP4Q9UKK3 1724 aaKnown RBP24.28■■□□□ 1.48
CHRNB4-202ENST00000412074 AMOTQ4VCS5 1084 aa24.27■■□□□ 1.48
CHRNB4-202ENST00000412074 ADAMTS8Q9UP79 889 aa24.27■■□□□ 1.48
CHRNB4-202ENST00000412074 LRRC37A3O60309 1634 aa24.26■■□□□ 1.47
CHRNB4-202ENST00000412074 PHACTR3Q96KR7 559 aa24.26■■□□□ 1.47
CHRNB4-202ENST00000412074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.26■■□□□ 1.47
CHRNB4-202ENST00000412074 CYP27B1O15528 508 aa24.25■■□□□ 1.47
CHRNB4-202ENST00000412074 ZNF530Q6P9A1 599 aaPredicted RBP24.25■■□□□ 1.47
CHRNB4-202ENST00000412074 MTHFSDQ2M296 383 aaKnown RBP24.24■■□□□ 1.47
CHRNB4-202ENST00000412074 PCDH11XQ9BZA7 1347 aa24.23■■□□□ 1.47
CHRNB4-202ENST00000412074 PCDH11YQ9BZA8 1340 aa24.23■■□□□ 1.47
CHRNB4-202ENST00000412074 FAM196AQ6ZSG2 479 aa24.23■■□□□ 1.47
CHRNB4-202ENST00000412074 PNISRQ8TF01 805 aaKnown RBP24.23■■□□□ 1.47
CHRNB4-202ENST00000412074 CCDC146Q8IYE0 955 aa24.22■■□□□ 1.47
CHRNB4-202ENST00000412074 IFNL2Q8IZJ0 200 aa24.22■■□□□ 1.47
CHRNB4-202ENST00000412074 PNNQ9H307 717 aaKnown RBP24.22■■□□□ 1.47
CHRNB4-202ENST00000412074 NEFMP07197 916 aa24.21■■□□□ 1.47
CHRNB4-202ENST00000412074 PHKG2P15735 406 aa24.21■■□□□ 1.47
CHRNB4-202ENST00000412074 ACSBG1Q96GR2 724 aa24.21■■□□□ 1.47
CHRNB4-202ENST00000412074 C1orf141Q5JVX7 400 aa24.2■■□□□ 1.46
CHRNB4-202ENST00000412074 PLEKHF1Q96S99 279 aa24.2■■□□□ 1.46
CHRNB4-202ENST00000412074 FAM9BQ8IZU0 186 aa24.19■■□□□ 1.46
CHRNB4-202ENST00000412074 CCER2I3L3R5 266 aa24.18■■□□□ 1.46
CHRNB4-202ENST00000412074 TRIM37O94972 964 aa24.17■■□□□ 1.46
CHRNB4-202ENST00000412074 MAPK8IP3Q9UPT6 1336 aa24.17■■□□□ 1.46
CHRNB4-202ENST00000412074 MPRIPQ6WCQ1 1025 aa24.16■■□□□ 1.46
CHRNB4-202ENST00000412074 GAS2L2Q8NHY3 880 aa24.16■■□□□ 1.46
CHRNB4-202ENST00000412074 KCNQ2O43526 872 aa24.16■■□□□ 1.46
CHRNB4-202ENST00000412074 AKAP4Q5JQC9 854 aa24.16■■□□□ 1.46
CHRNB4-202ENST00000412074 SYTL4Q96C24 671 aaPredicted RBP24.16■■□□□ 1.46
CHRNB4-202ENST00000412074 PRIM1P49642 420 aaKnown RBP24.15■■□□□ 1.46
CHRNB4-202ENST00000412074 NKX1-1Q15270 411 aaPredicted RBP24.15■■□□□ 1.46
CHRNB4-202ENST00000412074 RUNDC1Q96C34 613 aa24.15■■□□□ 1.46
CHRNB4-202ENST00000412074 PKD1L3Q7Z443 1732 aa24.15■■□□□ 1.46
CHRNB4-202ENST00000412074 PLEKHG2Q9H7P9 1386 aa24.14■■□□□ 1.46
CHRNB4-202ENST00000412074 SHANK3Q9BYB0 1731 aa24.14■■□□□ 1.45
CHRNB4-202ENST00000412074 PTF1AQ7RTS3 328 aa24.14■■□□□ 1.45
CHRNB4-202ENST00000412074 HSP90AB1P08238 724 aaKnown RBP24.13■■□□□ 1.45
CHRNB4-202ENST00000412074 SENP3-EIF4A1A0A087X0R7 540 aa24.12■■□□□ 1.45
CHRNB4-202ENST00000412074 UPF1Q92900 1129 aaKnown RBP eCLIP24.12■■□□□ 1.45
CHRNB4-202ENST00000412074 LGR6Q9HBX8 967 aa24.12■■□□□ 1.45
CHRNB4-202ENST00000412074 GNAT3A8MTJ3 354 aa24.11■■□□□ 1.45
CHRNB4-202ENST00000412074 NEUROD2Q15784 382 aa24.11■■□□□ 1.45
CHRNB4-202ENST00000412074 DCAF5Q96JK2 942 aa24.11■■□□□ 1.45
CHRNB4-202ENST00000412074 RRP7AQ9Y3A4 280 aaKnown RBP24.11■■□□□ 1.45
CHRNB4-202ENST00000412074 NFE2L2Q16236 605 aa24.1■■□□□ 1.45
CHRNB4-202ENST00000412074 BCL11BQ9C0K0 894 aaPredicted RBP24.09■■□□□ 1.45
CHRNB4-202ENST00000412074 BCL9O00512 1426 aa24.09■■□□□ 1.45
CHRNB4-202ENST00000412074 APAF1O14727 1248 aa24.08■■□□□ 1.45
CHRNB4-202ENST00000412074 RNMTO43148 476 aaKnown RBP24.08■■□□□ 1.45
CHRNB4-202ENST00000412074 SF3B2Q13435 895 aaKnown RBP24.08■■□□□ 1.45
CHRNB4-202ENST00000412074 MAP3K5Q99683 1374 aa24.08■■□□□ 1.44
CHRNB4-202ENST00000412074 KAT6BQ8WYB5 2073 aa24.07■■□□□ 1.44
CHRNB4-202ENST00000412074 TMPOP42166 694 aaKnown RBP24.07■■□□□ 1.44
CHRNB4-202ENST00000412074 RIPK4P57078 832 aa24.07■■□□□ 1.44
CHRNB4-202ENST00000412074 RTF1Q92541 710 aaKnown RBP24.07■■□□□ 1.44
CHRNB4-202ENST00000412074 APBA3O96018 575 aa24.06■■□□□ 1.44
CHRNB4-202ENST00000412074 CABP4P57796 275 aa24.06■■□□□ 1.44
CHRNB4-202ENST00000412074 DCTN1Q14203 1278 aa24.06■■□□□ 1.44
CHRNB4-202ENST00000412074 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
CHRNB4-202ENST00000412074 MCM10Q7L590 875 aa24.05■■□□□ 1.44
CHRNB4-202ENST00000412074 KDM6AO15550 1401 aaPredicted RBP24.05■■□□□ 1.44
CHRNB4-202ENST00000412074 ERVV-2B6SEH9 535 aa24.04■■□□□ 1.44
CHRNB4-202ENST00000412074 CCDC125Q86Z20 511 aa24.04■■□□□ 1.44
CHRNB4-202ENST00000412074 TMOD3Q9NYL9 352 aa24.04■■□□□ 1.44
CHRNB4-202ENST00000412074 NFATC2IPQ8NCF5 419 aa24.03■■□□□ 1.44
CHRNB4-202ENST00000412074 PIGBQ92521 554 aa24.03■■□□□ 1.44
CHRNB4-202ENST00000412074 SOCS7O14512 581 aa24.02■■□□□ 1.44
CHRNB4-202ENST00000412074 HTATSF1O43719 755 aaKnown RBP24.02■■□□□ 1.44
CHRNB4-202ENST00000412074 DEFB132Q7Z7B7 95 aa24.02■■□□□ 1.44
CHRNB4-202ENST00000412074 EP400Q96L91 3159 aa24.01■■□□□ 1.43
CHRNB4-202ENST00000412074 THUMPD2Q9BTF0 503 aaKnown RBP24.01■■□□□ 1.43
CHRNB4-202ENST00000412074 SALL2Q9Y467 1007 aaPredicted RBP24.01■■□□□ 1.43
CHRNB4-202ENST00000412074 DOT1LQ8TEK3 1739 aa24■■□□□ 1.43
CHRNB4-202ENST00000412074 SBF2Q86WG5 1849 aa24■■□□□ 1.43
CHRNB4-202ENST00000412074 EN1Q05925 392 aaPredicted RBP24■■□□□ 1.43
CHRNB4-202ENST00000412074 TEFQ10587 303 aa24■■□□□ 1.43
CHRNB4-202ENST00000412074 SLC52A2Q9HAB3 445 aa24■■□□□ 1.43
CHRNB4-202ENST00000412074 BAG6P46379 1132 aa23.99■■□□□ 1.43
CHRNB4-202ENST00000412074 TOGARAM1Q9Y4F4 1720 aa23.97■■□□□ 1.43
CHRNB4-202ENST00000412074 ASAP1Q9ULH1 1129 aa23.97■■□□□ 1.43
CHRNB4-202ENST00000412074 TRIM35Q9UPQ4 493 aa23.97■■□□□ 1.43
CHRNB4-202ENST00000412074 NHSQ6T4R5 1651 aa23.96■■□□□ 1.43
CHRNB4-202ENST00000412074 LMOD3Q0VAK6 560 aa23.96■■□□□ 1.43
CHRNB4-202ENST00000412074 EZH2Q15910 746 aaKnown RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms