RNA–Protein interactions for RNA: ENST00000411612.5

GSE1-204, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-204ENST00000411612 TATP17735 454 aaPredicted RBP29.8■■■□□ 2.36
GSE1-204ENST00000411612 DDX54Q8TDD1 881 aaKnown RBP29.79■■■□□ 2.36
GSE1-204ENST00000411612 KCNQ2O43526 872 aa29.78■■■□□ 2.36
GSE1-204ENST00000411612 TNNT2P45379 298 aaPredicted RBP29.78■■■□□ 2.36
GSE1-204ENST00000411612 NBPF14Q5TI25 921 aa29.78■■■□□ 2.36
GSE1-204ENST00000411612 USHBP1Q8N6Y0 703 aa29.78■■■□□ 2.36
GSE1-204ENST00000411612 NUP188Q5SRE5 1749 aa29.78■■■□□ 2.36
GSE1-204ENST00000411612 PLEKHG2Q9H7P9 1386 aa29.77■■■□□ 2.36
GSE1-204ENST00000411612 SHANK3Q9BYB0 1731 aa29.76■■■□□ 2.35
GSE1-204ENST00000411612 NPC1L1Q9UHC9 1359 aa29.76■■■□□ 2.35
GSE1-204ENST00000411612 PROM2Q8N271 834 aa29.75■■■□□ 2.35
GSE1-204ENST00000411612 EYA1Q99502 592 aa29.75■■■□□ 2.35
GSE1-204ENST00000411612 EIF4A2Q14240 407 aaKnown RBP29.74■■■□□ 2.35
GSE1-204ENST00000411612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.74■■■□□ 2.35
GSE1-204ENST00000411612 R3HDM1Q15032 1099 aaKnown RBP29.73■■■□□ 2.35
GSE1-204ENST00000411612 ACSBG1Q96GR2 724 aa29.73■■■□□ 2.35
GSE1-204ENST00000411612 PCDH11XQ9BZA7 1347 aa29.71■■■□□ 2.35
GSE1-204ENST00000411612 PCDH11YQ9BZA8 1340 aa29.71■■■□□ 2.35
GSE1-204ENST00000411612 PSDA5PKW4 1024 aaPredicted RBP29.71■■■□□ 2.35
GSE1-204ENST00000411612 TXNRD1Q16881 649 aa29.7■■■□□ 2.35
GSE1-204ENST00000411612 IGSF1Q8N6C5 1336 aa29.69■■■□□ 2.34
GSE1-204ENST00000411612 PKD1L3Q7Z443 1732 aa29.68■■■□□ 2.34
GSE1-204ENST00000411612 BTAF1O14981 1849 aa29.67■■■□□ 2.34
GSE1-204ENST00000411612 SPG7Q9UQ90 795 aa29.67■■■□□ 2.34
GSE1-204ENST00000411612 PRIM1P49642 420 aaKnown RBP29.66■■■□□ 2.34
GSE1-204ENST00000411612 LRP5O75197 1615 aa29.66■■■□□ 2.34
GSE1-204ENST00000411612 CYP27B1O15528 508 aa29.65■■■□□ 2.34
GSE1-204ENST00000411612 NKX1-1Q15270 411 aaPredicted RBP29.65■■■□□ 2.34
GSE1-204ENST00000411612 KAT6BQ8WYB5 2073 aa29.64■■■□□ 2.33
GSE1-204ENST00000411612 SLC27A3Q5K4L6 730 aa29.61■■■□□ 2.33
GSE1-204ENST00000411612 DOT1LQ8TEK3 1739 aa29.61■■■□□ 2.33
GSE1-204ENST00000411612 IL13P35225 146 aa29.58■■■□□ 2.33
GSE1-204ENST00000411612 MTHFSP49914 203 aa29.58■■■□□ 2.33
GSE1-204ENST00000411612 CC2D1BQ5T0F9 858 aaKnown RBP29.58■■■□□ 2.33
GSE1-204ENST00000411612 SYTL4Q96C24 671 aaPredicted RBP29.58■■■□□ 2.33
GSE1-204ENST00000411612 ANO8Q9HCE9 1232 aaPredicted RBP29.58■■■□□ 2.33
GSE1-204ENST00000411612 KDRP35968 1356 aa29.56■■■□□ 2.32
GSE1-204ENST00000411612 IFNL2Q8IZJ0 200 aa29.56■■■□□ 2.32
GSE1-204ENST00000411612 SLC15A2Q16348 729 aa29.55■■■□□ 2.32
GSE1-204ENST00000411612 STK32BQ9NY57 414 aa29.55■■■□□ 2.32
GSE1-204ENST00000411612 HMGB2P26583 209 aaKnown RBP29.54■■■□□ 2.32
GSE1-204ENST00000411612 AMOTQ4VCS5 1084 aa29.54■■■□□ 2.32
GSE1-204ENST00000411612 PAPPAQ13219 1627 aa29.53■■■□□ 2.32
GSE1-204ENST00000411612 PHKG2P15735 406 aa29.53■■■□□ 2.32
GSE1-204ENST00000411612 LRRC4BQ9NT99 713 aa29.53■■■□□ 2.32
GSE1-204ENST00000411612 PLEKHO1Q53GL0 409 aaPredicted RBP29.52■■■□□ 2.32
GSE1-204ENST00000411612 LY75O60449 1722 aa29.51■■■□□ 2.32
GSE1-204ENST00000411612 HSP90AB1P08238 724 aaKnown RBP29.48■■■□□ 2.31
GSE1-204ENST00000411612 SULT6B1Q6IMI4 303 aa29.48■■■□□ 2.31
GSE1-204ENST00000411612 CASZ1Q86V15 1759 aa29.47■■■□□ 2.31
GSE1-204ENST00000411612 DIAPH1O60610 1272 aaKnown RBP29.47■■■□□ 2.31
GSE1-204ENST00000411612 SMARCC1Q92922 1105 aaPredicted RBP29.47■■■□□ 2.31
GSE1-204ENST00000411612 TOGARAM1Q9Y4F4 1720 aa29.47■■■□□ 2.31
GSE1-204ENST00000411612 MPRIPQ6WCQ1 1025 aa29.46■■■□□ 2.31
GSE1-204ENST00000411612 AEBP1Q8IUX7 1158 aa29.46■■■□□ 2.31
GSE1-204ENST00000411612 SPON1Q9HCB6 807 aa29.46■■■□□ 2.31
GSE1-204ENST00000411612 AKT1S1Q96B36 256 aa29.45■■■□□ 2.31
GSE1-204ENST00000411612 ITGB4P16144 1822 aa29.45■■■□□ 2.3
GSE1-204ENST00000411612 PIGBQ92521 554 aa29.44■■■□□ 2.3
GSE1-204ENST00000411612 DCAF5Q96JK2 942 aa29.44■■■□□ 2.3
GSE1-204ENST00000411612 ERVV-2B6SEH9 535 aa29.43■■■□□ 2.3
GSE1-204ENST00000411612 CCNL1Q9UK58 526 aaPredicted RBP29.42■■■□□ 2.3
GSE1-204ENST00000411612 COL3A1P02461 1466 aaPredicted RBP29.42■■■□□ 2.3
GSE1-204ENST00000411612 PALLDQ8WX93 1383 aa29.4■■■□□ 2.3
GSE1-204ENST00000411612 ZNF827Q17R98 1081 aa29.4■■■□□ 2.3
GSE1-204ENST00000411612 ZNF530Q6P9A1 599 aaPredicted RBP29.4■■■□□ 2.3
GSE1-204ENST00000411612 TMOD3Q9NYL9 352 aa29.4■■■□□ 2.3
GSE1-204ENST00000411612 QSER1Q2KHR3 1735 aa29.39■■■□□ 2.3
GSE1-204ENST00000411612 PDGFDQ9GZP0 370 aaPredicted RBP29.38■■■□□ 2.29
GSE1-204ENST00000411612 C1orf141Q5JVX7 400 aa29.37■■■□□ 2.29
GSE1-204ENST00000411612 SLC16A10Q8TF71 515 aa29.36■■■□□ 2.29
GSE1-204ENST00000411612 MTFR1LQ9H019 292 aa29.36■■■□□ 2.29
GSE1-204ENST00000411612 CFAP53Q96M91 514 aa29.35■■■□□ 2.29
GSE1-204ENST00000411612 PPP2R1AP30153 589 aa29.34■■■□□ 2.29
GSE1-204ENST00000411612 KCNQ4P56696 695 aa29.33■■■□□ 2.29
GSE1-204ENST00000411612 AKAP4Q5JQC9 854 aa29.33■■■□□ 2.29
GSE1-204ENST00000411612 KDM6AO15550 1401 aaPredicted RBP29.33■■■□□ 2.29
GSE1-204ENST00000411612 HMOX1P09601 288 aa29.32■■■□□ 2.28
GSE1-204ENST00000411612 CNGB1Q14028 1251 aaPredicted RBP29.32■■■□□ 2.28
GSE1-204ENST00000411612 TFCP2L1Q9NZI6 479 aa29.32■■■□□ 2.28
GSE1-204ENST00000411612 ZBTB7AO95365 584 aa29.3■■■□□ 2.28
GSE1-204ENST00000411612 PTGER2P43116 358 aa29.3■■■□□ 2.28
GSE1-204ENST00000411612 ATG3Q9NT62 314 aa29.3■■■□□ 2.28
GSE1-204ENST00000411612 ASAP1Q9ULH1 1129 aa29.3■■■□□ 2.28
GSE1-204ENST00000411612 PNPLA7Q6ZV29 1317 aa29.29■■■□□ 2.28
GSE1-204ENST00000411612 C5P01031 1676 aa29.29■■■□□ 2.28
GSE1-204ENST00000411612 LOC102724428A0A0B4J2F2 783 aa29.29■■■□□ 2.28
GSE1-204ENST00000411612 SIK1P57059 783 aa29.29■■■□□ 2.28
GSE1-204ENST00000411612 CABP4P57796 275 aa29.29■■■□□ 2.28
GSE1-204ENST00000411612 ZEB1P37275 1124 aaPredicted RBP29.28■■■□□ 2.28
GSE1-204ENST00000411612 SGIP1Q9BQI5 828 aa29.28■■■□□ 2.28
GSE1-204ENST00000411612 TAF1LQ8IZX4 1826 aa29.28■■■□□ 2.28
GSE1-204ENST00000411612 FLAD1Q8NFF5 587 aa29.27■■■□□ 2.28
GSE1-204ENST00000411612 NUDCQ9Y266 331 aa29.27■■■□□ 2.28
GSE1-204ENST00000411612 ZNF831Q5JPB2 1677 aa29.26■■■□□ 2.27
GSE1-204ENST00000411612 U2SURPO15042 1029 aaKnown RBP29.26■■■□□ 2.27
GSE1-204ENST00000411612 PPP1R1BQ9UD71 204 aaPredicted RBP29.26■■■□□ 2.27
GSE1-204ENST00000411612 MTHFSDQ2M296 383 aaKnown RBP29.25■■■□□ 2.27
GSE1-204ENST00000411612 ATF5Q9Y2D1 282 aaPredicted RBP29.25■■■□□ 2.27
GSE1-204ENST00000411612 SCN11AQ9UI33 1791 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms