RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 LTV1Q96GA3 475 aaPredicted RBP3.39□□□□□ -1.87
RNU4-53P-201ENST00000410828 AK7Q96M32 723 aa3.39□□□□□ -1.87
RNU4-53P-201ENST00000410828 PAPPAQ13219 1627 aa3.39□□□□□ -1.87
RNU4-53P-201ENST00000410828 ABCC6O95255 1503 aa3.39□□□□□ -1.87
RNU4-53P-201ENST00000410828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 PHF14O94880 888 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 AMPHP49418 695 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 TGFB2P61812 414 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 ARHGAP27Q6ZUM4 889 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 HDGFL2Q7Z4V5 671 aaPredicted RBP3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 TMC1Q8TDI8 760 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 RAPGEF4Q8WZA2 1011 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 SMARCC1Q92922 1105 aaPredicted RBP3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 NMRK2Q9NPI5 230 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 BCS1LQ9Y276 419 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 TOPAZ1Q8N9V7 1692 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 ARHGEF28Q8N1W1 1705 aaKnown RBP3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 CGNL1Q0VF96 1302 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 COL18A1P39060 1754 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 NSD2O96028 1365 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 PALLDQ8WX93 1383 aa3.38□□□□□ -1.87
RNU4-53P-201ENST00000410828 TRPM1Q7Z4N2 1603 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 NHSQ6T4R5 1651 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 A0A0G2JLW4 131 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 FCHSD2O94868 740 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 MMP10P09238 476 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 TATP17735 454 aaPredicted RBP3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 SSFA2P28290 1259 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 HOXC9P31274 260 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 HTRA3P83110 453 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 C9orf131Q5VYM1 1079 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 MPRIPQ6WCQ1 1025 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 SMC1BQ8NDV3 1235 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 COG3Q96JB2 828 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 SLC12A5Q9H2X9 1139 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 TERF2IPQ9NYB0 399 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 NFAT5O94916 1531 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 MAP3K19Q56UN5 1328 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 KDM2BQ8NHM5 1336 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 SBNO2Q9Y2G9 1366 aa3.37□□□□□ -1.87
RNU4-53P-201ENST00000410828 NSD3Q9BZ95 1437 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 AKAP12Q02952 1782 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 LOC102724428A0A0B4J2F2 783 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 HSPA1AP0DMV8 641 aaKnown RBP3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 HSPA1BP0DMV9 641 aaKnown RBP3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 DPEP1P16444 411 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 SIK1P57059 783 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 NBPF6Q5VWK0 638 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 SMIM5Q71RC9 77 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 AMIGO3Q86WK7 504 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 NLGN1Q8N2Q7 840 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 L3MBTL2Q969R5 705 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 NBPF4Q96M43 638 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 PCDH11XQ9BZA7 1347 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 PCDH11YQ9BZA8 1340 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 PIK3C2AO00443 1686 aa3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 ROCK2O75116 1388 aaKnown RBP3.36□□□□□ -1.87
RNU4-53P-201ENST00000410828 BTAF1O14981 1849 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 GNPATO15228 680 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 CYP27B1O15528 508 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 SLC34A2O95436 690 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 ATP6V1AP38606 617 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 TMF1P82094 1093 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 TRAPPC3LQ5T215 181 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 PIGBQ92521 554 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 PUS7Q96PZ0 661 aaKnown RBP3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 RRAGCQ9HB90 399 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 CCDC87Q9NVE4 849 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 RNF181Q9P0P0 153 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 PIM2Q9P1W9 311 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 RTCBQ9Y3I0 505 aaKnown RBP3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 PLEKHG2Q9H7P9 1386 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 EDC4Q6P2E9 1401 aaKnown RBP3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 PXDNLA1KZ92 1463 aa3.35□□□□□ -1.87
RNU4-53P-201ENST00000410828 MEGF6O75095 1541 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 COL24A1Q17RW2 1714 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 VEGFAP15692 232 aaPredicted RBP3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 ADRA2BP18089 450 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 KCNA3P22001 575 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 FBLN1P23142 703 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 RFC4P35249 363 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 NKX1-1Q15270 411 aaPredicted RBP3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 HSP90AB2PQ58FF8 381 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 DALRD3Q5D0E6 543 aaKnown RBP3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 USHBP1Q8N6Y0 703 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 LINC00116Q8NCU8 138 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 DCAF5Q96JK2 942 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 CARD11Q9BXL7 1154 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 TMOD3Q9NYL9 352 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 PCDH10Q9P2E7 1040 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 SPG7Q9UQ90 795 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 PARP3Q9Y6F1 533 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 WNK3Q9BYP7 1800 aa3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 ZC3H4Q9UPT8 1303 aaKnown RBP3.34□□□□□ -1.87
RNU4-53P-201ENST00000410828 A0A1W2PP64 1363 aa3.34□□□□□ -1.88
RNU4-53P-201ENST00000410828 RTL1A6NKG5 1358 aa3.34□□□□□ -1.88
RNU4-53P-201ENST00000410828 SMG6Q86US8 1419 aaKnown RBP3.34□□□□□ -1.88
RNU4-53P-201ENST00000410828 CD163L1Q9NR16 1453 aa3.34□□□□□ -1.88
RNU4-53P-201ENST00000410828 QRICH2Q9H0J4 1663 aa3.33□□□□□ -1.88
RNU4-53P-201ENST00000410828 QSER1Q2KHR3 1735 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms