RNA–Protein interactions for RNA: ENST00000410720.1

RNU6-248P-201, Transcript of RNA, U6 small nuclear 248, pseudogene, humanhuman

BASIC

Gene RNU6-248P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-248P-201ENST00000410720 DNMT3LQ9UJW3 386 aa7.67□□□□□ -1.18
RNU6-248P-201ENST00000410720 VEGFBP49765 207 aa7.66□□□□□ -1.18
RNU6-248P-201ENST00000410720 RAB6BQ9NRW1 208 aa7.66□□□□□ -1.18
RNU6-248P-201ENST00000410720 SOS2Q07890 1332 aaPredicted RBP7.66□□□□□ -1.18
RNU6-248P-201ENST00000410720 PIK3CDO00329 1044 aa7.65□□□□□ -1.18
RNU6-248P-201ENST00000410720 CYP2U1Q7Z449 544 aa7.65□□□□□ -1.18
RNU6-248P-201ENST00000410720 SKIP12755 728 aa7.64□□□□□ -1.19
RNU6-248P-201ENST00000410720 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.64□□□□□ -1.19
RNU6-248P-201ENST00000410720 HDGFL1Q5TGJ6 251 aa7.64□□□□□ -1.19
RNU6-248P-201ENST00000410720 PHTF2Q8N3S3 785 aa7.64□□□□□ -1.19
RNU6-248P-201ENST00000410720 KDF1Q8NAX2 398 aaPredicted RBP7.64□□□□□ -1.19
RNU6-248P-201ENST00000410720 PLPP7Q8NBV4 271 aa7.64□□□□□ -1.19
RNU6-248P-201ENST00000410720 NLRP3Q96P20 1036 aa7.64□□□□□ -1.19
RNU6-248P-201ENST00000410720 OSBPL3Q9H4L5 887 aa7.64□□□□□ -1.19
RNU6-248P-201ENST00000410720 ALG2Q9H553 416 aa7.64□□□□□ -1.19
RNU6-248P-201ENST00000410720 ARHGEF10LQ9HCE6 1279 aa7.64□□□□□ -1.19
RNU6-248P-201ENST00000410720 A0A1W2PRU2 124 aa7.63□□□□□ -1.19
RNU6-248P-201ENST00000410720 NFX1Q12986 1120 aaKnown RBP7.63□□□□□ -1.19
RNU6-248P-201ENST00000410720 USP4Q13107 963 aa7.63□□□□□ -1.19
RNU6-248P-201ENST00000410720 TERTO14746 1132 aaKnown RBP7.62□□□□□ -1.19
RNU6-248P-201ENST00000410720 WFS1O76024 890 aa7.62□□□□□ -1.19
RNU6-248P-201ENST00000410720 NXF1Q9UBU9 619 aaKnown RBP7.62□□□□□ -1.19
RNU6-248P-201ENST00000410720 GTF3C3Q9Y5Q9 886 aa7.62□□□□□ -1.19
RNU6-248P-201ENST00000410720 SLC27A3Q5K4L6 730 aa7.61□□□□□ -1.19
RNU6-248P-201ENST00000410720 FOXD4L5Q5VV16 416 aaPredicted RBP7.61□□□□□ -1.19
RNU6-248P-201ENST00000410720 PRICKLE2Q7Z3G6 844 aa7.61□□□□□ -1.19
RNU6-248P-201ENST00000410720 DEPDC4Q8N2C3 294 aa7.61□□□□□ -1.19
RNU6-248P-201ENST00000410720 RNF217Q8TC41 542 aa7.61□□□□□ -1.19
RNU6-248P-201ENST00000410720 ADAMTS19Q8TE59 1207 aa7.61□□□□□ -1.19
RNU6-248P-201ENST00000410720 GLMNQ92990 594 aa7.61□□□□□ -1.19
RNU6-248P-201ENST00000410720 SIRT1Q96EB6 747 aa7.61□□□□□ -1.19
RNU6-248P-201ENST00000410720 TRAK2O60296 914 aa7.6□□□□□ -1.19
RNU6-248P-201ENST00000410720 STAU1O95793 577 aaKnown RBP7.6□□□□□ -1.19
RNU6-248P-201ENST00000410720 EML3Q32P44 896 aa7.6□□□□□ -1.19
RNU6-248P-201ENST00000410720 MAP7D1Q3KQU3 841 aa7.6□□□□□ -1.19
RNU6-248P-201ENST00000410720 LCE2CQ5TA81 110 aa7.6□□□□□ -1.19
RNU6-248P-201ENST00000410720 FNBP4Q8N3X1 1017 aaPredicted RBP7.6□□□□□ -1.19
RNU6-248P-201ENST00000410720 SLC16A10Q8TF71 515 aa7.6□□□□□ -1.19
RNU6-248P-201ENST00000410720 A6NJR5 290 aa7.59□□□□□ -1.19
RNU6-248P-201ENST00000410720 GNRH1P01148 92 aa7.59□□□□□ -1.19
RNU6-248P-201ENST00000410720 PTSQ03393 145 aa7.59□□□□□ -1.19
RNU6-248P-201ENST00000410720 LYSMD3Q7Z3D4 306 aa7.59□□□□□ -1.19
RNU6-248P-201ENST00000410720 CALR3Q96L12 384 aaKnown RBP7.59□□□□□ -1.19
RNU6-248P-201ENST00000410720 RHOQP17081 205 aa7.58□□□□□ -1.2
RNU6-248P-201ENST00000410720 PSME1Q06323 249 aa7.58□□□□□ -1.2
RNU6-248P-201ENST00000410720 NCOA4Q13772 614 aa7.58□□□□□ -1.2
RNU6-248P-201ENST00000410720 CNKSR1Q969H4 720 aa7.58□□□□□ -1.2
RNU6-248P-201ENST00000410720 ZNF777Q9ULD5 760 aaPredicted RBP7.58□□□□□ -1.2
RNU6-248P-201ENST00000410720 USP17L5A8MUK1 530 aa7.57□□□□□ -1.2
RNU6-248P-201ENST00000410720 RNF144AP50876 292 aaPredicted RBP7.57□□□□□ -1.2
RNU6-248P-201ENST00000410720 CLN3Q13286 438 aa7.57□□□□□ -1.2
RNU6-248P-201ENST00000410720 TBC1D9Q6ZT07 1266 aa7.57□□□□□ -1.2
RNU6-248P-201ENST00000410720 IL2RAP01589 272 aa7.56□□□□□ -1.2
RNU6-248P-201ENST00000410720 ESCO1Q5FWF5 840 aa7.56□□□□□ -1.2
RNU6-248P-201ENST00000410720 UCN2Q96RP3 112 aa7.56□□□□□ -1.2
RNU6-248P-201ENST00000410720 CHIC2Q9UKJ5 165 aa7.56□□□□□ -1.2
RNU6-248P-201ENST00000410720 NOD1Q9Y239 953 aa7.56□□□□□ -1.2
RNU6-248P-201ENST00000410720 H3BM21 787 aa7.55□□□□□ -1.2
RNU6-248P-201ENST00000410720 PPFIA3O75145 1194 aa7.55□□□□□ -1.2
RNU6-248P-201ENST00000410720 GTF2E1P29083 439 aaPredicted RBP7.55□□□□□ -1.2
RNU6-248P-201ENST00000410720 POU4F2Q12837 409 aa7.55□□□□□ -1.2
RNU6-248P-201ENST00000410720 CCDC155Q8N6L0 562 aa7.55□□□□□ -1.2
RNU6-248P-201ENST00000410720 NFATC2IPQ8NCF5 419 aa7.55□□□□□ -1.2
RNU6-248P-201ENST00000410720 ESYT1Q9BSJ8 1104 aa7.55□□□□□ -1.2
RNU6-248P-201ENST00000410720 ETNK1Q9HBU6 452 aa7.55□□□□□ -1.2
RNU6-248P-201ENST00000410720 SERTAD1Q9UHV2 236 aa7.55□□□□□ -1.2
RNU6-248P-201ENST00000410720 USP17L3A6NCW0 530 aa7.54□□□□□ -1.2
RNU6-248P-201ENST00000410720 USP17L4A6NCW7 530 aa7.54□□□□□ -1.2
RNU6-248P-201ENST00000410720 WIPF1O43516 503 aa7.54□□□□□ -1.2
RNU6-248P-201ENST00000410720 ATP9BO43861 1147 aa7.54□□□□□ -1.2
RNU6-248P-201ENST00000410720 GPC1P35052 558 aa7.54□□□□□ -1.2
RNU6-248P-201ENST00000410720 GDF10P55107 478 aa7.54□□□□□ -1.2
RNU6-248P-201ENST00000410720 GTF2IP78347 998 aa7.54□□□□□ -1.2
RNU6-248P-201ENST00000410720 CENPCQ03188 943 aa7.54□□□□□ -1.2
RNU6-248P-201ENST00000410720 USP17L2Q6R6M4 530 aa7.54□□□□□ -1.2
RNU6-248P-201ENST00000410720 USP17L1Q7RTZ2 530 aa7.54□□□□□ -1.2
RNU6-248P-201ENST00000410720 IRF7Q92985 503 aa7.54□□□□□ -1.2
RNU6-248P-201ENST00000410720 ZSCAN10Q96SZ4 725 aaPredicted RBP7.54□□□□□ -1.2
RNU6-248P-201ENST00000410720 CDC14CA4D256 554 aa7.53□□□□□ -1.2
RNU6-248P-201ENST00000410720 PHKA2P46019 1235 aa7.53□□□□□ -1.2
RNU6-248P-201ENST00000410720 TLR1Q15399 786 aa7.53□□□□□ -1.2
RNU6-248P-201ENST00000410720 TMEM214Q6NUQ4 689 aaKnown RBP7.53□□□□□ -1.2
RNU6-248P-201ENST00000410720 NPAS3Q8IXF0 933 aa7.53□□□□□ -1.2
RNU6-248P-201ENST00000410720 TFIP11Q9UBB9 837 aaKnown RBP7.53□□□□□ -1.2
RNU6-248P-201ENST00000410720 ERBB4Q15303 1308 aa7.52□□□□□ -1.2
RNU6-248P-201ENST00000410720 RIPOR1Q6ZS17 1223 aa7.52□□□□□ -1.21
RNU6-248P-201ENST00000410720 XAGE2Q96GT9 111 aa7.52□□□□□ -1.21
RNU6-248P-201ENST00000410720 GAS2L1Q99501 681 aaPredicted RBP7.52□□□□□ -1.21
RNU6-248P-201ENST00000410720 SLC35F4A4IF30 521 aa7.51□□□□□ -1.21
RNU6-248P-201ENST00000410720 WASLO00401 505 aaPredicted RBP7.51□□□□□ -1.21
RNU6-248P-201ENST00000410720 LZTS3O60299 673 aaPredicted RBP7.51□□□□□ -1.21
RNU6-248P-201ENST00000410720 INHAP05111 366 aa7.51□□□□□ -1.21
RNU6-248P-201ENST00000410720 SCNN1DP51172 638 aa7.51□□□□□ -1.21
RNU6-248P-201ENST00000410720 GNASQ5JWF2 1037 aa7.51□□□□□ -1.21
RNU6-248P-201ENST00000410720 TAS1R3Q7RTX0 852 aa7.51□□□□□ -1.21
RNU6-248P-201ENST00000410720 GRIP2Q9C0E4 1043 aa7.51□□□□□ -1.21
RNU6-248P-201ENST00000410720 ZMYND15Q9H091 742 aa7.51□□□□□ -1.21
RNU6-248P-201ENST00000410720 SENP3-EIF4A1A0A087X0R7 540 aa7.5□□□□□ -1.21
RNU6-248P-201ENST00000410720 PALM3A6NDB9 673 aaPredicted RBP7.5□□□□□ -1.21
RNU6-248P-201ENST00000410720 ITGA6P23229 1130 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms