RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ERVH48-1M5A8F1 160 aa7.89□□□□□ -1.15
LSM5-205ENST00000409952 LILRA1O75019 489 aa7.89□□□□□ -1.15
LSM5-205ENST00000409952 BMP1P13497 986 aa7.89□□□□□ -1.15
LSM5-205ENST00000409952 KIFC2Q96AC6 838 aa7.89□□□□□ -1.15
LSM5-205ENST00000409952 PGPEP1Q9NXJ5 209 aa7.89□□□□□ -1.15
LSM5-205ENST00000409952 WASHC4Q2M389 1173 aa7.88□□□□□ -1.15
LSM5-205ENST00000409952 PHTF2Q8N3S3 785 aa7.88□□□□□ -1.15
LSM5-205ENST00000409952 POM121CA8CG34 1229 aa7.87□□□□□ -1.15
LSM5-205ENST00000409952 CSB-PGBD3P0DP91 1061 aa7.87□□□□□ -1.15
LSM5-205ENST00000409952 ABL2P42684 1182 aa7.87□□□□□ -1.15
LSM5-205ENST00000409952 ZFP42Q96MM3 310 aa7.87□□□□□ -1.15
LSM5-205ENST00000409952 CEP126Q9P2H0 1117 aa7.87□□□□□ -1.15
LSM5-205ENST00000409952 CHIC2Q9UKJ5 165 aa7.87□□□□□ -1.15
LSM5-205ENST00000409952 EIF4G2P78344 907 aaKnown RBP eCLIP7.86□□□□□ -1.15
LSM5-205ENST00000409952 CCDC27Q2M243 656 aa7.86□□□□□ -1.15
LSM5-205ENST00000409952 RNF20Q5VTR2 975 aa7.86□□□□□ -1.15
LSM5-205ENST00000409952 KDF1Q8NAX2 398 aaPredicted RBP7.86□□□□□ -1.15
LSM5-205ENST00000409952 ZNF784Q8NCA9 323 aaPredicted RBP7.86□□□□□ -1.15
LSM5-205ENST00000409952 TMPRSS4Q9NRS4 437 aa7.86□□□□□ -1.15
LSM5-205ENST00000409952 ADD1P35611 737 aaKnown RBP7.85□□□□□ -1.15
LSM5-205ENST00000409952 VAC14Q08AM6 782 aa7.85□□□□□ -1.15
LSM5-205ENST00000409952 NFX1Q12986 1120 aaKnown RBP7.85□□□□□ -1.15
LSM5-205ENST00000409952 CBLBQ13191 982 aa7.85□□□□□ -1.15
LSM5-205ENST00000409952 LINC00528Q8N1L1 170 aa7.85□□□□□ -1.15
LSM5-205ENST00000409952 TSEN34Q9BSV6 310 aaKnown RBP7.85□□□□□ -1.15
LSM5-205ENST00000409952 SOX11P35716 441 aa7.84□□□□□ -1.15
LSM5-205ENST00000409952 ERVK-9P63128 1117 aa7.84□□□□□ -1.15
LSM5-205ENST00000409952 SCARF1Q14162 830 aa7.83□□□□□ -1.16
LSM5-205ENST00000409952 PURBQ96QR8 312 aaKnown RBP7.83□□□□□ -1.16
LSM5-205ENST00000409952 SOS2Q07890 1332 aaPredicted RBP7.82□□□□□ -1.16
LSM5-205ENST00000409952 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.82□□□□□ -1.16
LSM5-205ENST00000409952 SPINT1O43278 529 aa7.82□□□□□ -1.16
LSM5-205ENST00000409952 ADH1AP07327 375 aa7.82□□□□□ -1.16
LSM5-205ENST00000409952 INSM1Q01101 510 aaPredicted RBP7.82□□□□□ -1.16
LSM5-205ENST00000409952 SND1Q7KZF4 910 aaKnown RBP eCLIP7.82□□□□□ -1.16
LSM5-205ENST00000409952 TRIM52Q96A61 297 aa7.82□□□□□ -1.16
LSM5-205ENST00000409952 ALG2Q9H553 416 aa7.82□□□□□ -1.16
LSM5-205ENST00000409952 HMGB1P09429 215 aaKnown RBP7.81□□□□□ -1.16
LSM5-205ENST00000409952 CCDC85AQ96PX6 553 aaPredicted RBP7.81□□□□□ -1.16
LSM5-205ENST00000409952 IVNS1ABPQ9Y6Y0 642 aa7.81□□□□□ -1.16
LSM5-205ENST00000409952 RAB15P59190 212 aa7.8□□□□□ -1.16
LSM5-205ENST00000409952 SRPK2P78362 688 aaKnown RBP7.8□□□□□ -1.16
LSM5-205ENST00000409952 CFAP70Q5T0N1 1121 aa7.8□□□□□ -1.16
LSM5-205ENST00000409952 WFS1O76024 890 aa7.79□□□□□ -1.16
LSM5-205ENST00000409952 UPP2O95045 317 aa7.79□□□□□ -1.16
LSM5-205ENST00000409952 BMP2P12643 396 aa7.79□□□□□ -1.16
LSM5-205ENST00000409952 RFX1P22670 979 aa7.79□□□□□ -1.16
LSM5-205ENST00000409952 SCTRP47872 440 aa7.79□□□□□ -1.16
LSM5-205ENST00000409952 HDGFL1Q5TGJ6 251 aa7.79□□□□□ -1.16
LSM5-205ENST00000409952 CC2D2BQ6DHV5 1058 aa7.79□□□□□ -1.16
LSM5-205ENST00000409952 CYLDQ9NQC7 956 aa7.79□□□□□ -1.16
LSM5-205ENST00000409952 PTGIRP43119 386 aa7.78□□□□□ -1.16
LSM5-205ENST00000409952 C6orf118Q5T5N4 469 aa7.78□□□□□ -1.16
LSM5-205ENST00000409952 AGBL1Q96MI9 1066 aa7.78□□□□□ -1.16
LSM5-205ENST00000409952 OSBPL3Q9H4L5 887 aa7.78□□□□□ -1.16
LSM5-205ENST00000409952 PCDHB11Q9Y5F2 797 aa7.78□□□□□ -1.16
LSM5-205ENST00000409952 SOBPA7XYQ1 873 aa7.77□□□□□ -1.17
LSM5-205ENST00000409952 TERTO14746 1132 aaKnown RBP7.77□□□□□ -1.17
LSM5-205ENST00000409952 TSGA10IPQ3SY00 556 aa7.77□□□□□ -1.17
LSM5-205ENST00000409952 ADAMTS19Q8TE59 1207 aa7.77□□□□□ -1.17
LSM5-205ENST00000409952 CDCA7Q9BWT1 371 aaPredicted RBP7.77□□□□□ -1.17
LSM5-205ENST00000409952 SEMA3FQ13275 785 aa7.76□□□□□ -1.17
LSM5-205ENST00000409952 NPAS3Q8IXF0 933 aa7.76□□□□□ -1.17
LSM5-205ENST00000409952 NFATC2IPQ8NCF5 419 aa7.76□□□□□ -1.17
LSM5-205ENST00000409952 PPP1R12CQ9BZL4 782 aa7.76□□□□□ -1.17
LSM5-205ENST00000409952 VRTNQ9H8Y1 702 aa7.76□□□□□ -1.17
LSM5-205ENST00000409952 DNMT3LQ9UJW3 386 aa7.76□□□□□ -1.17
LSM5-205ENST00000409952 TTLL8A6PVC2 850 aa7.75□□□□□ -1.17
LSM5-205ENST00000409952 HSP90B1P14625 803 aaKnown RBP7.75□□□□□ -1.17
LSM5-205ENST00000409952 RELBQ01201 579 aa7.75□□□□□ -1.17
LSM5-205ENST00000409952 MAP7D1Q3KQU3 841 aa7.75□□□□□ -1.17
LSM5-205ENST00000409952 SLFNL1Q499Z3 407 aa7.75□□□□□ -1.17
LSM5-205ENST00000409952 RNF135Q8IUD6 432 aa7.75□□□□□ -1.17
LSM5-205ENST00000409952 USP35Q9P2H5 1018 aa7.75□□□□□ -1.17
LSM5-205ENST00000409952 CARNS1A5YM72 827 aa7.74□□□□□ -1.17
LSM5-205ENST00000409952 ATP5J2-PTCD1G3V325 749 aa7.74□□□□□ -1.17
LSM5-205ENST00000409952 CTSOP43234 321 aaPredicted RBP7.74□□□□□ -1.17
LSM5-205ENST00000409952 WIPF1O43516 503 aa7.73□□□□□ -1.17
LSM5-205ENST00000409952 VEGFBP49765 207 aa7.73□□□□□ -1.17
LSM5-205ENST00000409952 RNF144AP50876 292 aaPredicted RBP7.73□□□□□ -1.17
LSM5-205ENST00000409952 CYP2U1Q7Z449 544 aa7.73□□□□□ -1.17
LSM5-205ENST00000409952 RNF217Q8TC41 542 aa7.73□□□□□ -1.17
LSM5-205ENST00000409952 INSM2Q96T92 566 aaPredicted RBP7.73□□□□□ -1.17
LSM5-205ENST00000409952 ZNF395Q9H8N7 513 aaPredicted RBP7.73□□□□□ -1.17
LSM5-205ENST00000409952 NXF1Q9UBU9 619 aaKnown RBP7.73□□□□□ -1.17
LSM5-205ENST00000409952 DOLKQ9UPQ8 538 aa7.73□□□□□ -1.17
LSM5-205ENST00000409952 HRH3Q9Y5N1 445 aa7.73□□□□□ -1.17
LSM5-205ENST00000409952 PIK3CDO00329 1044 aa7.72□□□□□ -1.17
LSM5-205ENST00000409952 GPC1P35052 558 aa7.72□□□□□ -1.17
LSM5-205ENST00000409952 CLN3Q13286 438 aa7.72□□□□□ -1.17
LSM5-205ENST00000409952 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.72□□□□□ -1.17
LSM5-205ENST00000409952 PLPP7Q8NBV4 271 aa7.72□□□□□ -1.17
LSM5-205ENST00000409952 PUS7Q96PZ0 661 aaKnown RBP7.72□□□□□ -1.17
LSM5-205ENST00000409952 GNEQ9Y223 722 aaKnown RBP7.72□□□□□ -1.17
LSM5-205ENST00000409952 A0A1W2PRU2 124 aa7.71□□□□□ -1.18
LSM5-205ENST00000409952 PALM3A6NDB9 673 aaPredicted RBP7.71□□□□□ -1.18
LSM5-205ENST00000409952 TMEM88BA6NKF7 163 aa7.71□□□□□ -1.18
LSM5-205ENST00000409952 MAN1A2O60476 641 aa7.71□□□□□ -1.18
LSM5-205ENST00000409952 ATG7O95352 703 aa7.71□□□□□ -1.18
LSM5-205ENST00000409952 GNRH1P01148 92 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms