RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TPD52L1Q16890 204 aaPredicted RBP20.14■□□□□ 0.82
PCDHA13-202ENST00000409494 CTNNA3Q9UI47 895 aa20.14■□□□□ 0.82
PCDHA13-202ENST00000409494 MAST1Q9Y2H9 1570 aa20.14■□□□□ 0.81
PCDHA13-202ENST00000409494 ANKRD24Q8TF21 1146 aa20.14■□□□□ 0.81
PCDHA13-202ENST00000409494 GOLGA6L19H0YKK7 550 aa20.14■□□□□ 0.81
PCDHA13-202ENST00000409494 ZPR1O75312 459 aa20.14■□□□□ 0.81
PCDHA13-202ENST00000409494 ANKRD20A12PQ8NF67 263 aa20.13■□□□□ 0.81
PCDHA13-202ENST00000409494 DNAJC2Q99543 621 aaKnown RBP20.13■□□□□ 0.81
PCDHA13-202ENST00000409494 ARHGEF5Q12774 1597 aa20.13■□□□□ 0.81
PCDHA13-202ENST00000409494 TPM1P09493 284 aa20.13■□□□□ 0.81
PCDHA13-202ENST00000409494 A0A087WZG4 1122 aa20.13■□□□□ 0.81
PCDHA13-202ENST00000409494 TSR1Q2NL82 804 aaKnown RBP20.13■□□□□ 0.81
PCDHA13-202ENST00000409494 MCM10Q7L590 875 aa20.13■□□□□ 0.81
PCDHA13-202ENST00000409494 KIF1BPQ96EK5 621 aa20.13■□□□□ 0.81
PCDHA13-202ENST00000409494 BECN2A8MW95 431 aa20.12■□□□□ 0.81
PCDHA13-202ENST00000409494 FYB1O15117 783 aa20.12■□□□□ 0.81
PCDHA13-202ENST00000409494 RAD21O60216 631 aa20.12■□□□□ 0.81
PCDHA13-202ENST00000409494 MAGI2Q86UL8 1455 aa20.12■□□□□ 0.81
PCDHA13-202ENST00000409494 ADAMTS2O95450 1211 aa20.11■□□□□ 0.81
PCDHA13-202ENST00000409494 TPM3P06753 285 aa20.11■□□□□ 0.81
PCDHA13-202ENST00000409494 ZFYVE9O95405 1425 aa20.11■□□□□ 0.81
PCDHA13-202ENST00000409494 SIRT1Q96EB6 747 aa20.11■□□□□ 0.81
PCDHA13-202ENST00000409494 CHD1LQ86WJ1 897 aa20.1■□□□□ 0.81
PCDHA13-202ENST00000409494 YTHDC2Q9H6S0 1430 aaKnown RBP20.1■□□□□ 0.81
PCDHA13-202ENST00000409494 RARSP54136 660 aaKnown RBP20.1■□□□□ 0.81
PCDHA13-202ENST00000409494 ZFYVE16Q7Z3T8 1539 aa20.1■□□□□ 0.81
PCDHA13-202ENST00000409494 KRT32Q14532 448 aa20.1■□□□□ 0.81
PCDHA13-202ENST00000409494 KCNA6P17658 529 aa20.09■□□□□ 0.81
PCDHA13-202ENST00000409494 NPATQ14207 1427 aa20.09■□□□□ 0.81
PCDHA13-202ENST00000409494 SMARCC1Q92922 1105 aaPredicted RBP20.09■□□□□ 0.81
PCDHA13-202ENST00000409494 FLT4P35916 1363 aa20.09■□□□□ 0.81
PCDHA13-202ENST00000409494 DNAAF4Q8WXU2 420 aa20.09■□□□□ 0.81
PCDHA13-202ENST00000409494 ABCA8O94911 1581 aa20.09■□□□□ 0.81
PCDHA13-202ENST00000409494 POLR3AO14802 1390 aaPredicted RBP20.09■□□□□ 0.81
PCDHA13-202ENST00000409494 PTCD1O75127 700 aaKnown RBP20.08■□□□□ 0.81
PCDHA13-202ENST00000409494 LRRC59Q96AG4 307 aaKnown RBP20.08■□□□□ 0.81
PCDHA13-202ENST00000409494 CWC22Q9HCG8 908 aaKnown RBP20.08■□□□□ 0.81
PCDHA13-202ENST00000409494 CCDC73Q6ZRK6 1079 aa20.08■□□□□ 0.8
PCDHA13-202ENST00000409494 UBAP1LF5GYI3 381 aa20.08■□□□□ 0.8
PCDHA13-202ENST00000409494 SOS1Q07889 1333 aaPredicted RBP20.08■□□□□ 0.8
PCDHA13-202ENST00000409494 IFIT1P09914 478 aaKnown RBP20.07■□□□□ 0.8
PCDHA13-202ENST00000409494 SNRPA1P09661 255 aaKnown RBP20.07■□□□□ 0.8
PCDHA13-202ENST00000409494 VPS37CA5D8V6 355 aaPredicted RBP20.07■□□□□ 0.8
PCDHA13-202ENST00000409494 HSP90AA2PQ14568 343 aaPredicted RBP20.07■□□□□ 0.8
PCDHA13-202ENST00000409494 AMER1Q5JTC6 1135 aaPredicted RBP20.07■□□□□ 0.8
PCDHA13-202ENST00000409494 AACSQ86V21 672 aa20.07■□□□□ 0.8
PCDHA13-202ENST00000409494 IL27Q8NEV9 243 aa20.07■□□□□ 0.8
PCDHA13-202ENST00000409494 GLRX3O76003 335 aaKnown RBP20.07■□□□□ 0.8
PCDHA13-202ENST00000409494 CEP89Q96ST8 783 aa20.07■□□□□ 0.8
PCDHA13-202ENST00000409494 PZPP20742 1482 aa20.06■□□□□ 0.8
PCDHA13-202ENST00000409494 SSH1Q8WYL5 1049 aa20.06■□□□□ 0.8
PCDHA13-202ENST00000409494 ARHGAP45Q92619 1136 aa20.06■□□□□ 0.8
PCDHA13-202ENST00000409494 MPRIPQ6WCQ1 1025 aa20.06■□□□□ 0.8
PCDHA13-202ENST00000409494 ABCC1P33527 1531 aa20.06■□□□□ 0.8
PCDHA13-202ENST00000409494 C1orf115Q9H7X2 142 aa20.06■□□□□ 0.8
PCDHA13-202ENST00000409494 TMEM57Q8N5G2 664 aa20.05■□□□□ 0.8
PCDHA13-202ENST00000409494 BICD2Q8TD16 824 aa20.05■□□□□ 0.8
PCDHA13-202ENST00000409494 CCDC43Q96MW1 224 aaKnown RBP20.05■□□□□ 0.8
PCDHA13-202ENST00000409494 CYP46A1Q9Y6A2 500 aa20.05■□□□□ 0.8
PCDHA13-202ENST00000409494 PIK3R4Q99570 1358 aa20.05■□□□□ 0.8
PCDHA13-202ENST00000409494 ZCRB1Q8TBF4 217 aaKnown RBP20.05■□□□□ 0.8
PCDHA13-202ENST00000409494 CDCA7Q9BWT1 371 aaPredicted RBP20.04■□□□□ 0.8
PCDHA13-202ENST00000409494 NPC1L1Q9UHC9 1359 aa20.04■□□□□ 0.8
PCDHA13-202ENST00000409494 MRE11P49959 708 aa20.04■□□□□ 0.8
PCDHA13-202ENST00000409494 AKAP4Q5JQC9 854 aa20.04■□□□□ 0.8
PCDHA13-202ENST00000409494 USHBP1Q8N6Y0 703 aa20.04■□□□□ 0.8
PCDHA13-202ENST00000409494 ZNF287Q9HBT7 754 aa20.04■□□□□ 0.8
PCDHA13-202ENST00000409494 ARID3AQ99856 593 aa20.03■□□□□ 0.8
PCDHA13-202ENST00000409494 SIL1Q9H173 461 aa20.03■□□□□ 0.8
PCDHA13-202ENST00000409494 IFIT5Q13325 482 aaKnown RBP20.02■□□□□ 0.8
PCDHA13-202ENST00000409494 FOXD4L6Q3SYB3 417 aaPredicted RBP20.02■□□□□ 0.8
PCDHA13-202ENST00000409494 CAVIN4Q5BKX8 364 aa20.02■□□□□ 0.8
PCDHA13-202ENST00000409494 FOXD4L3Q6VB84 417 aaPredicted RBP20.02■□□□□ 0.8
PCDHA13-202ENST00000409494 MYO5CQ9NQX4 1742 aa20.02■□□□□ 0.8
PCDHA13-202ENST00000409494 NEK4P51957 841 aa20.02■□□□□ 0.8
PCDHA13-202ENST00000409494 TESK2Q96S53 571 aa20.02■□□□□ 0.8
PCDHA13-202ENST00000409494 THUMPD2Q9BTF0 503 aaKnown RBP20.02■□□□□ 0.8
PCDHA13-202ENST00000409494 METTL24Q5JXM2 366 aa20.02■□□□□ 0.79
PCDHA13-202ENST00000409494 TRAK2O60296 914 aa20.01■□□□□ 0.79
PCDHA13-202ENST00000409494 TRIM22Q8IYM9 498 aa20.01■□□□□ 0.79
PCDHA13-202ENST00000409494 ZSCAN31Q96LW9 406 aaPredicted RBP20.01■□□□□ 0.79
PCDHA13-202ENST00000409494 FLIIQ13045 1269 aa20.01■□□□□ 0.79
PCDHA13-202ENST00000409494 AEBP1Q8IUX7 1158 aa20.01■□□□□ 0.79
PCDHA13-202ENST00000409494 TMOD2Q9NZR1 351 aa20.01■□□□□ 0.79
PCDHA13-202ENST00000409494 PIK3C2GO75747 1445 aa20.01■□□□□ 0.79
PCDHA13-202ENST00000409494 DCTN1Q14203 1278 aa20.01■□□□□ 0.79
PCDHA13-202ENST00000409494 PPP1R42Q7Z4L9 355 aa20■□□□□ 0.79
PCDHA13-202ENST00000409494 MYD88Q99836 296 aa20■□□□□ 0.79
PCDHA13-202ENST00000409494 BRPF3Q9ULD4 1205 aa20■□□□□ 0.79
PCDHA13-202ENST00000409494 PARD3Q8TEW0 1356 aa20■□□□□ 0.79
PCDHA13-202ENST00000409494 CDKL5O76039 1030 aa20■□□□□ 0.79
PCDHA13-202ENST00000409494 JMYQ8N9B5 988 aa19.99■□□□□ 0.79
PCDHA13-202ENST00000409494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.99■□□□□ 0.79
PCDHA13-202ENST00000409494 SLF2Q8IX21 1173 aa19.99■□□□□ 0.79
PCDHA13-202ENST00000409494 ZNF396Q96N95 335 aaPredicted RBP19.99■□□□□ 0.79
PCDHA13-202ENST00000409494 TMEM2Q9UHN6 1383 aa19.99■□□□□ 0.79
PCDHA13-202ENST00000409494 ANKRD18BA2A2Z9 1011 aa19.99■□□□□ 0.79
PCDHA13-202ENST00000409494 IKQ13123 557 aaPredicted RBP19.98■□□□□ 0.79
PCDHA13-202ENST00000409494 CREBRFQ8IUR6 639 aa19.98■□□□□ 0.79
PCDHA13-202ENST00000409494 MIS18AQ9NYP9 233 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms