RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 PSME1Q06323 249 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 ESCO1Q5FWF5 840 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 ZNF428Q96B54 188 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 OCEL1Q9H607 264 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 C19orf44Q9H6X5 657 aa8.09□□□□□ -1.11
GTF3C3-202ENST00000409364 KIF20BQ96Q89 1820 aa8.08□□□□□ -1.12
GTF3C3-202ENST00000409364 KIF24Q5T7B8 1368 aa8.08□□□□□ -1.12
GTF3C3-202ENST00000409364 HSPA2P54652 639 aa8.08□□□□□ -1.12
GTF3C3-202ENST00000409364 GNAI1P63096 354 aa8.08□□□□□ -1.12
GTF3C3-202ENST00000409364 HSP90AB2PQ58FF8 381 aa8.08□□□□□ -1.12
GTF3C3-202ENST00000409364 PLA2G2EQ9NZK7 142 aa8.08□□□□□ -1.12
GTF3C3-202ENST00000409364 ADGRL3Q9HAR2 1447 aa8.07□□□□□ -1.12
GTF3C3-202ENST00000409364 MON2Q7Z3U7 1717 aa8.07□□□□□ -1.12
GTF3C3-202ENST00000409364 MAP3K19Q56UN5 1328 aa8.07□□□□□ -1.12
GTF3C3-202ENST00000409364 FANCIQ9NVI1 1328 aa8.07□□□□□ -1.12
GTF3C3-202ENST00000409364 EXOSC9Q06265 439 aaKnown RBP8.07□□□□□ -1.12
GTF3C3-202ENST00000409364 SULT6B1Q6IMI4 303 aa8.07□□□□□ -1.12
GTF3C3-202ENST00000409364 LMTK3Q96Q04 1460 aa8.07□□□□□ -1.12
GTF3C3-202ENST00000409364 SBNO1A3KN83 1393 aa8.07□□□□□ -1.12
GTF3C3-202ENST00000409364 AKAP12Q02952 1782 aa8.06□□□□□ -1.12
GTF3C3-202ENST00000409364 FRAT1Q92837 279 aaPredicted RBP8.06□□□□□ -1.12
GTF3C3-202ENST00000409364 TSR2Q969E8 191 aaKnown RBP8.06□□□□□ -1.12
GTF3C3-202ENST00000409364 RBM33Q96EV2 1170 aaKnown RBP8.06□□□□□ -1.12
GTF3C3-202ENST00000409364 IFT57Q9NWB7 429 aa8.06□□□□□ -1.12
GTF3C3-202ENST00000409364 RBM19Q9Y4C8 960 aaKnown RBP8.06□□□□□ -1.12
GTF3C3-202ENST00000409364 FLT4P35916 1363 aa8.06□□□□□ -1.12
GTF3C3-202ENST00000409364 TOPAZ1Q8N9V7 1692 aa8.06□□□□□ -1.12
GTF3C3-202ENST00000409364 SOX12O15370 315 aa8.06□□□□□ -1.12
GTF3C3-202ENST00000409364 IPO8O15397 1037 aaKnown RBP8.06□□□□□ -1.12
GTF3C3-202ENST00000409364 KCNH5Q8NCM2 988 aa8.06□□□□□ -1.12
GTF3C3-202ENST00000409364 CFAP44Q96MT7 982 aa8.06□□□□□ -1.12
GTF3C3-202ENST00000409364 TCERG1O14776 1098 aaKnown RBP8.05□□□□□ -1.12
GTF3C3-202ENST00000409364 ZNF853P0CG23 659 aa8.05□□□□□ -1.12
GTF3C3-202ENST00000409364 ALDH1L2Q3SY69 923 aa8.05□□□□□ -1.12
GTF3C3-202ENST00000409364 ZKSCAN2Q63HK3 967 aa8.05□□□□□ -1.12
GTF3C3-202ENST00000409364 CENPQQ7L2Z9 268 aaPredicted RBP8.05□□□□□ -1.12
GTF3C3-202ENST00000409364 ITSN1Q15811 1721 aa8.05□□□□□ -1.12
GTF3C3-202ENST00000409364 CHD2O14647 1828 aaKnown RBP8.05□□□□□ -1.12
GTF3C3-202ENST00000409364 ATF3P18847 181 aa8.04□□□□□ -1.12
GTF3C3-202ENST00000409364 HOXC9P31274 260 aa8.04□□□□□ -1.12
GTF3C3-202ENST00000409364 HAP1P54257 671 aaPredicted RBP8.04□□□□□ -1.12
GTF3C3-202ENST00000409364 BRPF1P55201 1214 aaPredicted RBP8.04□□□□□ -1.12
GTF3C3-202ENST00000409364 NUTM2GQ5VZR2 741 aa8.04□□□□□ -1.12
GTF3C3-202ENST00000409364 SMC4Q9NTJ3 1288 aa8.04□□□□□ -1.12
GTF3C3-202ENST00000409364 LAS1LQ9Y4W2 734 aaKnown RBP8.04□□□□□ -1.12
GTF3C3-202ENST00000409364 NCOA3Q9Y6Q9 1424 aa8.04□□□□□ -1.12
GTF3C3-202ENST00000409364 MAP2P11137 1827 aaKnown RBP8.04□□□□□ -1.12
GTF3C3-202ENST00000409364 ARHGEF10O15013 1369 aa8.04□□□□□ -1.12
GTF3C3-202ENST00000409364 FOXO3O43524 673 aa8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 C3orf67Q6ZVT6 689 aa8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 AEBP1Q8IUX7 1158 aa8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 SSH1Q8WYL5 1049 aa8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 IP6K1Q92551 441 aa8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 ORAI2Q96SN7 254 aa8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 EYA1Q99502 592 aa8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 HTATSF1O43719 755 aaKnown RBP8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 KRT28Q7Z3Y7 464 aa8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 DZIP1LQ8IYY4 767 aaKnown RBP8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 GAS2L2Q8NHY3 880 aa8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 PANK1Q8TE04 598 aa8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 CLUAP1Q96AJ1 413 aa8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 COG6Q9Y2V7 657 aa8.03□□□□□ -1.12
GTF3C3-202ENST00000409364 NRKQ7Z2Y5 1582 aa8.02□□□□□ -1.12
GTF3C3-202ENST00000409364 IGSF1Q8N6C5 1336 aa8.02□□□□□ -1.13
GTF3C3-202ENST00000409364 LRRC7Q96NW7 1537 aa8.02□□□□□ -1.13
GTF3C3-202ENST00000409364 VAMP4O75379 141 aa8.02□□□□□ -1.13
GTF3C3-202ENST00000409364 ATF7IPQ6VMQ6 1270 aa8.02□□□□□ -1.13
GTF3C3-202ENST00000409364 CADPS2Q86UW7 1296 aa8.02□□□□□ -1.13
GTF3C3-202ENST00000409364 FTSJ3Q8IY81 847 aaKnown RBP8.02□□□□□ -1.13
GTF3C3-202ENST00000409364 RTF1Q92541 710 aaKnown RBP8.02□□□□□ -1.13
GTF3C3-202ENST00000409364 THUMPD2Q9BTF0 503 aaKnown RBP8.02□□□□□ -1.13
GTF3C3-202ENST00000409364 BCL2L13Q9BXK5 485 aa8.02□□□□□ -1.13
GTF3C3-202ENST00000409364 KDM2BQ8NHM5 1336 aa8.02□□□□□ -1.13
GTF3C3-202ENST00000409364 KIF16BQ96L93 1317 aa8.02□□□□□ -1.13
GTF3C3-202ENST00000409364 FMN2Q9NZ56 1722 aa8.01□□□□□ -1.13
GTF3C3-202ENST00000409364 CHL1O00533 1208 aa8.01□□□□□ -1.13
GTF3C3-202ENST00000409364 ARHGAP45Q92619 1136 aa8.01□□□□□ -1.13
GTF3C3-202ENST00000409364 MBIPQ9NS73 344 aa8.01□□□□□ -1.13
GTF3C3-202ENST00000409364 NOB1Q9ULX3 412 aaKnown RBP8.01□□□□□ -1.13
GTF3C3-202ENST00000409364 RTL1A6NKG5 1358 aa8.01□□□□□ -1.13
GTF3C3-202ENST00000409364 KDRP35968 1356 aa8.01□□□□□ -1.13
GTF3C3-202ENST00000409364 ERBB3P21860 1342 aa8.01□□□□□ -1.13
GTF3C3-202ENST00000409364 STRCQ7RTU9 1775 aa8.01□□□□□ -1.13
GTF3C3-202ENST00000409364 TMEM94Q12767 1356 aa8.01□□□□□ -1.13
GTF3C3-202ENST00000409364 FAM83GA6ND36 823 aa8□□□□□ -1.13
GTF3C3-202ENST00000409364 GCP02774 474 aa8□□□□□ -1.13
GTF3C3-202ENST00000409364 MVPQ14764 893 aaKnown RBP8□□□□□ -1.13
GTF3C3-202ENST00000409364 ERICH6Q7L0X2 663 aa8□□□□□ -1.13
GTF3C3-202ENST00000409364 CHMP4BQ9H444 224 aaKnown RBP8□□□□□ -1.13
GTF3C3-202ENST00000409364 DDX19BQ9UMR2 479 aa8□□□□□ -1.13
GTF3C3-202ENST00000409364 RLBP1P12271 317 aa8□□□□□ -1.13
GTF3C3-202ENST00000409364 TRIM27P14373 513 aa8□□□□□ -1.13
GTF3C3-202ENST00000409364 DCTN1Q14203 1278 aa8□□□□□ -1.13
GTF3C3-202ENST00000409364 MTHFSDQ2M296 383 aaKnown RBP8□□□□□ -1.13
GTF3C3-202ENST00000409364 TWISTNBQ3B726 338 aaPredicted RBP8□□□□□ -1.13
GTF3C3-202ENST00000409364 NWD1Q149M9 1564 aa7.99□□□□□ -1.13
GTF3C3-202ENST00000409364 C1orf167Q5SNV9 1468 aa7.99□□□□□ -1.13
GTF3C3-202ENST00000409364 LMOD2Q6P5Q4 547 aa7.99□□□□□ -1.13
GTF3C3-202ENST00000409364 ARHGEF25Q86VW2 580 aa7.99□□□□□ -1.13
GTF3C3-202ENST00000409364 TMEM106CQ9BVX2 250 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms