RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 APBB1O00213 710 aa19.12■□□□□ 0.65
ATG4B-205ENST00000404914 SMARCA5O60264 1052 aaPredicted RBP19.12■□□□□ 0.65
ATG4B-205ENST00000404914 NUCB2P80303 420 aa19.12■□□□□ 0.65
ATG4B-205ENST00000404914 SYCE3A1L190 88 aa19.11■□□□□ 0.65
ATG4B-205ENST00000404914 FCHSD2O94868 740 aa19.11■□□□□ 0.65
ATG4B-205ENST00000404914 ZNF500O60304 480 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-205ENST00000404914 ARHGAP45Q92619 1136 aa19.11■□□□□ 0.65
ATG4B-205ENST00000404914 UQCRHLA0A096LP55 91 aa19.11■□□□□ 0.65
ATG4B-205ENST00000404914 UQCRHP07919 91 aa19.11■□□□□ 0.65
ATG4B-205ENST00000404914 NEXMIFQ5QGS0 1516 aa19.1■□□□□ 0.65
ATG4B-205ENST00000404914 ZBTB7CA1YPR0 619 aa19.1■□□□□ 0.65
ATG4B-205ENST00000404914 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.1■□□□□ 0.651e-8■□□□□ 9.2
ATG4B-205ENST00000404914 RNF214Q8ND24 703 aa19.1■□□□□ 0.65
ATG4B-205ENST00000404914 FAM83GA6ND36 823 aa19.09■□□□□ 0.65
ATG4B-205ENST00000404914 TWISTNBQ3B726 338 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-205ENST00000404914 RPGRIP1LQ68CZ1 1315 aa19.09■□□□□ 0.65
ATG4B-205ENST00000404914 SDSP20132 328 aa19.09■□□□□ 0.65
ATG4B-205ENST00000404914 NFE2L2Q16236 605 aa19.09■□□□□ 0.65
ATG4B-205ENST00000404914 DCTPP1Q9H773 170 aa19.09■□□□□ 0.65
ATG4B-205ENST00000404914 POLKQ9UBT6 870 aa19.09■□□□□ 0.65
ATG4B-205ENST00000404914 A2ML1A8K2U0 1454 aa19.08■□□□□ 0.65
ATG4B-205ENST00000404914 ZKSCAN5Q9Y2L8 839 aa19.08■□□□□ 0.65
ATG4B-205ENST00000404914 UBR1Q8IWV7 1749 aa19.08■□□□□ 0.65
ATG4B-205ENST00000404914 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.64
ATG4B-205ENST00000404914 DCTN1Q14203 1278 aa19.07■□□□□ 0.64
ATG4B-205ENST00000404914 HS1BP3Q53T59 392 aa19.07■□□□□ 0.64
ATG4B-205ENST00000404914 JARID2Q92833 1246 aaPredicted RBP19.07■□□□□ 0.64
ATG4B-205ENST00000404914 PRAM1Q96QH2 718 aa19.07■□□□□ 0.64
ATG4B-205ENST00000404914 ZNF428Q96B54 188 aa19.07■□□□□ 0.64
ATG4B-205ENST00000404914 TERF2IPQ9NYB0 399 aa19.07■□□□□ 0.64
ATG4B-205ENST00000404914 CABP1Q9NZU7 370 aa19.07■□□□□ 0.64
ATG4B-205ENST00000404914 ZNF853P0CG23 659 aa19.07■□□□□ 0.64
ATG4B-205ENST00000404914 TERF1P54274 439 aa19.07■□□□□ 0.64
ATG4B-205ENST00000404914 KRT24Q2M2I5 525 aa19.07■□□□□ 0.64
ATG4B-205ENST00000404914 PRDM4Q9UKN5 801 aa19.07■□□□□ 0.64
ATG4B-205ENST00000404914 VGFO15240 615 aaPredicted RBP19.06■□□□□ 0.64
ATG4B-205ENST00000404914 MPNDQ8N594 471 aa19.06■□□□□ 0.64
ATG4B-205ENST00000404914 EMILIN1Q9Y6C2 1016 aa19.06■□□□□ 0.64
ATG4B-205ENST00000404914 LRSAM1Q6UWE0 723 aa19.05■□□□□ 0.64
ATG4B-205ENST00000404914 ATP10DQ9P241 1426 aa19.05■□□□□ 0.64
ATG4B-205ENST00000404914 CDC42BPGQ6DT37 1551 aa19.05■□□□□ 0.64
ATG4B-205ENST00000404914 INTS3Q68E01 1043 aaKnown RBP19.04■□□□□ 0.64
ATG4B-205ENST00000404914 IFT57Q9NWB7 429 aa19.04■□□□□ 0.64
ATG4B-205ENST00000404914 SETD1BQ9UPS6 1966 aaKnown RBP19.04■□□□□ 0.64
ATG4B-205ENST00000404914 GNAI1P63096 354 aa19.03■□□□□ 0.64
ATG4B-205ENST00000404914 DLG5Q8TDM6 1919 aa19.03■□□□□ 0.64
ATG4B-205ENST00000404914 CHMP4BQ9H444 224 aaKnown RBP19.03■□□□□ 0.64
ATG4B-205ENST00000404914 MAP2P11137 1827 aaKnown RBP19.03■□□□□ 0.64
ATG4B-205ENST00000404914 KIF20BQ96Q89 1820 aa19.02■□□□□ 0.64
ATG4B-205ENST00000404914 CWC22Q9HCG8 908 aaKnown RBP19.02■□□□□ 0.63
ATG4B-205ENST00000404914 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.63
ATG4B-205ENST00000404914 FOXD4L6Q3SYB3 417 aaPredicted RBP19.01■□□□□ 0.63
ATG4B-205ENST00000404914 FOXD4L3Q6VB84 417 aaPredicted RBP19.01■□□□□ 0.63
ATG4B-205ENST00000404914 CDK19Q9BWU1 502 aa19.01■□□□□ 0.63
ATG4B-205ENST00000404914 CEP170BQ9Y4F5 1589 aaPredicted RBP19.01■□□□□ 0.63
ATG4B-205ENST00000404914 ST18O60284 1047 aa19.01■□□□□ 0.63
ATG4B-205ENST00000404914 ANKRD44Q8N8A2 993 aa19.01■□□□□ 0.63
ATG4B-205ENST00000404914 API5Q9BZZ5 524 aaKnown RBP19.01■□□□□ 0.63
ATG4B-205ENST00000404914 CEP85Q6P2H3 762 aa19■□□□□ 0.63
ATG4B-205ENST00000404914 TSC1Q92574 1164 aa19■□□□□ 0.63
ATG4B-205ENST00000404914 ZFYVE9O95405 1425 aa19■□□□□ 0.63
ATG4B-205ENST00000404914 TSHZ3Q63HK5 1081 aa19■□□□□ 0.63
ATG4B-205ENST00000404914 NOL8Q76FK4 1167 aaKnown RBP19■□□□□ 0.63
ATG4B-205ENST00000404914 HDGFL2Q7Z4V5 671 aaPredicted RBP19■□□□□ 0.63
ATG4B-205ENST00000404914 YTHDC2Q9H6S0 1430 aaKnown RBP19■□□□□ 0.63
ATG4B-205ENST00000404914 RGS12O14924 1447 aa18.99■□□□□ 0.63
ATG4B-205ENST00000404914 TMX3Q96JJ7 454 aa18.99■□□□□ 0.63
ATG4B-205ENST00000404914 MEIS3Q99687 375 aa18.99■□□□□ 0.63
ATG4B-205ENST00000404914 IL13P35225 146 aa18.98■□□□□ 0.63
ATG4B-205ENST00000404914 CFAP44Q96MT7 982 aa18.98■□□□□ 0.63
ATG4B-205ENST00000404914 GDPD2Q9HCC8 539 aa18.98■□□□□ 0.63
ATG4B-205ENST00000404914 PRDM10Q9NQV6 1147 aa18.98■□□□□ 0.63
ATG4B-205ENST00000404914 RIMS2Q9UQ26 1411 aa18.98■□□□□ 0.63
ATG4B-205ENST00000404914 MSH6P52701 1360 aa18.98■□□□□ 0.63
ATG4B-205ENST00000404914 NEK4P51957 841 aa18.98■□□□□ 0.63
ATG4B-205ENST00000404914 LTKP29376 864 aa18.97■□□□□ 0.63
ATG4B-205ENST00000404914 ZNF830Q96NB3 372 aaPredicted RBP18.97■□□□□ 0.63
ATG4B-205ENST00000404914 PALD1Q9ULE6 856 aa18.97■□□□□ 0.63
ATG4B-205ENST00000404914 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.97■□□□□ 0.63
ATG4B-205ENST00000404914 CCDC39Q9UFE4 941 aa18.96■□□□□ 0.63
ATG4B-205ENST00000404914 TMEM2Q9UHN6 1383 aa18.96■□□□□ 0.63
ATG4B-205ENST00000404914 ZNF142P52746 1687 aaPredicted RBP18.96■□□□□ 0.63
ATG4B-205ENST00000404914 GADD45BO75293 160 aaPredicted RBP18.96■□□□□ 0.63
ATG4B-205ENST00000404914 SASS6Q6UVJ0 657 aa18.95■□□□□ 0.62
ATG4B-205ENST00000404914 RTL1A6NKG5 1358 aa18.95■□□□□ 0.62
ATG4B-205ENST00000404914 C17orf53Q8N3J3 647 aaPredicted RBP18.95■□□□□ 0.62
ATG4B-205ENST00000404914 DYNC1I1O14576 645 aa18.95■□□□□ 0.62
ATG4B-205ENST00000404914 ERC2O15083 957 aa18.95■□□□□ 0.62
ATG4B-205ENST00000404914 TCHHQ07283 1943 aa18.94■□□□□ 0.62
ATG4B-205ENST00000404914 BRD1O95696 1058 aa18.94■□□□□ 0.62
ATG4B-205ENST00000404914 NME9Q86XW9 330 aa18.94■□□□□ 0.62
ATG4B-205ENST00000404914 MAP7D2Q96T17 732 aa18.94■□□□□ 0.62
ATG4B-205ENST00000404914 RRS1Q15050 365 aaKnown RBP18.93■□□□□ 0.62
ATG4B-205ENST00000404914 CSPP1Q1MSJ5 1256 aa18.93■□□□□ 0.62
ATG4B-205ENST00000404914 TPRNQ4KMQ1 711 aa18.93■□□□□ 0.62
ATG4B-205ENST00000404914 REC8O95072 547 aa18.93■□□□□ 0.62
ATG4B-205ENST00000404914 MCM5P33992 734 aa18.93■□□□□ 0.62
ATG4B-205ENST00000404914 FAM177BA6PVY3 158 aa18.92■□□□□ 0.62
ATG4B-205ENST00000404914 PTMAP06454 111 aaKnown RBP18.92■□□□□ 0.62
ATG4B-205ENST00000404914 CASC1Q6TDU7 716 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms