RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 NUTM2GQ5VZR2 741 aa21.33■■□□□ 1
DNMT3A-205ENST00000402667 KIF24Q5T7B8 1368 aa21.32■■□□□ 1
DNMT3A-205ENST00000402667 BECN1Q14457 450 aa21.32■■□□□ 1
DNMT3A-205ENST00000402667 NFKBIBQ15653 356 aa21.32■■□□□ 1
DNMT3A-205ENST00000402667 ANKLE2Q86XL3 938 aa21.32■■□□□ 1
DNMT3A-205ENST00000402667 RTF1Q92541 710 aaKnown RBP21.31■■□□□ 1
DNMT3A-205ENST00000402667 ANKRD45Q5TZF3 282 aa21.3■■□□□ 1
DNMT3A-205ENST00000402667 INTS3Q68E01 1043 aaKnown RBP21.3■■□□□ 1
DNMT3A-205ENST00000402667 ABTB2Q8N961 1025 aa21.3■■□□□ 1
DNMT3A-205ENST00000402667 MIS18AQ9NYP9 233 aa21.3■■□□□ 1
DNMT3A-205ENST00000402667 HOXC9P31274 260 aa21.3■■□□□ 1
DNMT3A-205ENST00000402667 GAS2L2Q8NHY3 880 aa21.29■■□□□ 1
DNMT3A-205ENST00000402667 MARF1Q9Y4F3 1742 aaKnown RBP21.28■■□□□ 1
DNMT3A-205ENST00000402667 RGS12O14924 1447 aa21.28■■□□□ 1
DNMT3A-205ENST00000402667 MFAP1P55081 439 aaKnown RBP21.27■■□□□ 1
DNMT3A-205ENST00000402667 TSPYL4Q9UJ04 414 aa21.27■■□□□ 1
DNMT3A-205ENST00000402667 PHF8Q9UPP1 1060 aa21.27■■□□□ 1
DNMT3A-205ENST00000402667 CHD2O14647 1828 aaKnown RBP21.27■■□□□ 1
DNMT3A-205ENST00000402667 C22orf23Q9BZE7 217 aa21.27■□□□□ 0.99
DNMT3A-205ENST00000402667 PTPRCP08575 1304 aa21.26■□□□□ 0.99
DNMT3A-205ENST00000402667 RBM33Q96EV2 1170 aaKnown RBP21.26■□□□□ 0.99
DNMT3A-205ENST00000402667 USP54Q70EL1 1684 aa21.25■□□□□ 0.99
DNMT3A-205ENST00000402667 HTATSF1O43719 755 aaKnown RBP21.24■□□□□ 0.99
DNMT3A-205ENST00000402667 SLC4A2P04920 1241 aa21.24■□□□□ 0.99
DNMT3A-205ENST00000402667 BMP2KLQ5H9B9 411 aa21.24■□□□□ 0.99
DNMT3A-205ENST00000402667 C14orf37Q86TY3 774 aa21.23■□□□□ 0.99
DNMT3A-205ENST00000402667 TBC1D2Q9BYX2 928 aa21.23■□□□□ 0.99
DNMT3A-205ENST00000402667 NWD1Q149M9 1564 aa21.22■□□□□ 0.99
DNMT3A-205ENST00000402667 LTV1Q96GA3 475 aaPredicted RBP21.22■□□□□ 0.99
DNMT3A-205ENST00000402667 GNAT3A8MTJ3 354 aa21.21■□□□□ 0.99
DNMT3A-205ENST00000402667 DCTPP1Q9H773 170 aa21.21■□□□□ 0.99
DNMT3A-205ENST00000402667 ZNF142P52746 1687 aaPredicted RBP21.21■□□□□ 0.99
DNMT3A-205ENST00000402667 ANKRD44Q8N8A2 993 aa21.2■□□□□ 0.98
DNMT3A-205ENST00000402667 G2E3Q7L622 706 aa21.19■□□□□ 0.98
DNMT3A-205ENST00000402667 RPAP2Q8IXW5 612 aaPredicted RBP21.19■□□□□ 0.98
DNMT3A-205ENST00000402667 MSH6P52701 1360 aa21.19■□□□□ 0.98
DNMT3A-205ENST00000402667 ATP10DQ9P241 1426 aa21.19■□□□□ 0.98
DNMT3A-205ENST00000402667 FRAT2O75474 233 aaPredicted RBP21.18■□□□□ 0.98
DNMT3A-205ENST00000402667 RTL1A6NKG5 1358 aa21.18■□□□□ 0.98
DNMT3A-205ENST00000402667 SLKQ9H2G2 1235 aaPredicted RBP21.18■□□□□ 0.98
DNMT3A-205ENST00000402667 ESCO1Q5FWF5 840 aa21.17■□□□□ 0.98
DNMT3A-205ENST00000402667 CEP85Q6P2H3 762 aa21.17■□□□□ 0.98
DNMT3A-205ENST00000402667 IL17REQ8NFR9 667 aa21.17■□□□□ 0.98
DNMT3A-205ENST00000402667 MEIS3Q99687 375 aa21.17■□□□□ 0.98
DNMT3A-205ENST00000402667 ADGRL3Q9HAR2 1447 aa21.17■□□□□ 0.98
DNMT3A-205ENST00000402667 SETD1BQ9UPS6 1966 aaKnown RBP21.17■□□□□ 0.98
DNMT3A-205ENST00000402667 PSME1Q06323 249 aa21.17■□□□□ 0.98
DNMT3A-205ENST00000402667 ANTXR1Q9H6X2 564 aa21.17■□□□□ 0.98
DNMT3A-205ENST00000402667 IP6K1Q92551 441 aa21.16■□□□□ 0.98
DNMT3A-205ENST00000402667 LRRC37A3O60309 1634 aa21.16■□□□□ 0.98
DNMT3A-205ENST00000402667 MAP3K5Q99683 1374 aa21.16■□□□□ 0.98
DNMT3A-205ENST00000402667 ADAMTSL3P82987 1691 aa21.16■□□□□ 0.98
DNMT3A-205ENST00000402667 RBM25P49756 843 aaKnown RBP21.15■□□□□ 0.98
DNMT3A-205ENST00000402667 USHBP1Q8N6Y0 703 aa21.15■□□□□ 0.98
DNMT3A-205ENST00000402667 F6X3S4 739 aa21.14■□□□□ 0.97
DNMT3A-205ENST00000402667 LTN1O94822 1766 aa21.14■□□□□ 0.97
DNMT3A-205ENST00000402667 PLEKHM2Q8IWE5 1019 aa21.13■□□□□ 0.97
DNMT3A-205ENST00000402667 STK31Q9BXU1 1019 aa21.13■□□□□ 0.97
DNMT3A-205ENST00000402667 SLC4A10Q6U841 1118 aa21.13■□□□□ 0.97
DNMT3A-205ENST00000402667 NFAT5O94916 1531 aa21.13■□□□□ 0.97
DNMT3A-205ENST00000402667 CCT4P50991 539 aaKnown RBP21.12■□□□□ 0.97
DNMT3A-205ENST00000402667 TAF7Q15545 349 aaPredicted RBP21.12■□□□□ 0.97
DNMT3A-205ENST00000402667 NPHP4O75161 1426 aaPredicted RBP21.12■□□□□ 0.97
DNMT3A-205ENST00000402667 CCDC30Q5VVM6 783 aa21.12■□□□□ 0.97
DNMT3A-205ENST00000402667 TBC1D9Q6ZT07 1266 aa21.12■□□□□ 0.97
DNMT3A-205ENST00000402667 BABAM1Q9NWV8 329 aa21.12■□□□□ 0.97
DNMT3A-205ENST00000402667 NBPF6Q5VWK0 638 aa21.11■□□□□ 0.97
DNMT3A-205ENST00000402667 KCNH5Q8NCM2 988 aa21.11■□□□□ 0.97
DNMT3A-205ENST00000402667 NBPF4Q96M43 638 aa21.11■□□□□ 0.97
DNMT3A-205ENST00000402667 C16orf71Q8IYS4 520 aaPredicted RBP21.1■□□□□ 0.97
DNMT3A-205ENST00000402667 GSPT1P15170 499 aaKnown RBP21.1■□□□□ 0.97
DNMT3A-205ENST00000402667 SOS1Q07889 1333 aaPredicted RBP21.09■□□□□ 0.97
DNMT3A-205ENST00000402667 FLIIQ13045 1269 aa21.09■□□□□ 0.97
DNMT3A-205ENST00000402667 GSE1Q14687 1217 aa21.09■□□□□ 0.97
DNMT3A-205ENST00000402667 NECTIN2Q92692 538 aa21.09■□□□□ 0.97
DNMT3A-205ENST00000402667 ORAI2Q96SN7 254 aa21.09■□□□□ 0.97
DNMT3A-205ENST00000402667 SPRYD3Q8NCJ5 442 aa21.08■□□□□ 0.97
DNMT3A-205ENST00000402667 ZBTB7CA1YPR0 619 aa21.07■□□□□ 0.96
DNMT3A-205ENST00000402667 CDC45O75419 566 aa21.07■□□□□ 0.96
DNMT3A-205ENST00000402667 FKBP5Q13451 457 aaPredicted RBP21.07■□□□□ 0.96
DNMT3A-205ENST00000402667 TTC22Q5TAA0 569 aa21.07■□□□□ 0.96
DNMT3A-205ENST00000402667 HMMRO75330 724 aa21.06■□□□□ 0.96
DNMT3A-205ENST00000402667 HSCBQ8IWL3 235 aa21.06■□□□□ 0.96
DNMT3A-205ENST00000402667 OTUD7AQ8TE49 926 aaPredicted RBP21.06■□□□□ 0.96
DNMT3A-205ENST00000402667 CEMIPQ8WUJ3 1361 aa21.06■□□□□ 0.96
DNMT3A-205ENST00000402667 FAM208AQ9UK61 1670 aaKnown RBP21.06■□□□□ 0.96
DNMT3A-205ENST00000402667 SMARCA5O60264 1052 aaPredicted RBP21.05■□□□□ 0.96
DNMT3A-205ENST00000402667 APBB1O00213 710 aa21.05■□□□□ 0.96
DNMT3A-205ENST00000402667 XPCQ01831 940 aaPredicted RBP21.05■□□□□ 0.96
DNMT3A-205ENST00000402667 GCP02774 474 aa21.04■□□□□ 0.96
DNMT3A-205ENST00000402667 GNAI2P04899 355 aa21.04■□□□□ 0.96
DNMT3A-205ENST00000402667 SNX21Q969T3 373 aa21.04■□□□□ 0.96
DNMT3A-205ENST00000402667 KIF2CQ99661 725 aa21.04■□□□□ 0.96
DNMT3A-205ENST00000402667 CACNA1FO60840 1977 aa21.04■□□□□ 0.96
DNMT3A-205ENST00000402667 LRRC59Q96AG4 307 aaKnown RBP21.04■□□□□ 0.96
DNMT3A-205ENST00000402667 LGR6Q9HBX8 967 aa21.04■□□□□ 0.96
DNMT3A-205ENST00000402667 PHRF1Q9P1Y6 1649 aaKnown RBP21.03■□□□□ 0.96
DNMT3A-205ENST00000402667 ARHGEF25Q86VW2 580 aa21.03■□□□□ 0.96
DNMT3A-205ENST00000402667 HDGFL1Q5TGJ6 251 aa21.01■□□□□ 0.95
DNMT3A-205ENST00000402667 GNAI3P08754 354 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms