RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 CTNNA3Q9UI47 895 aa18.17■□□□□ 0.5
ABCC1-201ENST00000399408 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
ABCC1-201ENST00000399408 SMC2O95347 1197 aa18.17■□□□□ 0.5
ABCC1-201ENST00000399408 MX1P20591 662 aa18.17■□□□□ 0.5
ABCC1-201ENST00000399408 DISP3Q9P2K9 1392 aa18.16■□□□□ 0.5
ABCC1-201ENST00000399408 GPATCH8Q9UKJ3 1502 aaKnown RBP18.16■□□□□ 0.5
ABCC1-201ENST00000399408 NAP1L1P55209 391 aaKnown RBP18.16■□□□□ 0.5
ABCC1-201ENST00000399408 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
ABCC1-201ENST00000399408 R3HCC1Q9Y3T6 440 aaKnown RBP18.16■□□□□ 0.5
ABCC1-201ENST00000399408 RAB11FIP3O75154 756 aa18.16■□□□□ 0.5
ABCC1-201ENST00000399408 CCDC192P0DO97 292 aa18.16■□□□□ 0.5
ABCC1-201ENST00000399408 FMNL2Q96PY5 1086 aa18.16■□□□□ 0.5
ABCC1-201ENST00000399408 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
ABCC1-201ENST00000399408 DENND4BO75064 1496 aaPredicted RBP18.16■□□□□ 0.5
ABCC1-201ENST00000399408 AMOTQ4VCS5 1084 aa18.15■□□□□ 0.5
ABCC1-201ENST00000399408 CCDC69A6NI79 296 aa18.15■□□□□ 0.5
ABCC1-201ENST00000399408 PRM3Q9NNZ6 103 aa18.15■□□□□ 0.5
ABCC1-201ENST00000399408 AMOTL2Q9Y2J4 779 aa18.15■□□□□ 0.5
ABCC1-201ENST00000399408 AEBP2Q6ZN18 517 aaPredicted RBP18.14■□□□□ 0.49
ABCC1-201ENST00000399408 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
ABCC1-201ENST00000399408 PHF8Q9UPP1 1060 aa18.14■□□□□ 0.49
ABCC1-201ENST00000399408 NUTM2BA6NNL0 878 aaPredicted RBP18.14■□□□□ 0.49
ABCC1-201ENST00000399408 NUTM2EB1AL46 878 aaPredicted RBP18.14■□□□□ 0.49
ABCC1-201ENST00000399408 EPS15P42566 896 aa18.14■□□□□ 0.49
ABCC1-201ENST00000399408 TEX35Q5T0J7 233 aa18.14■□□□□ 0.49
ABCC1-201ENST00000399408 NUTM2AQ8IVF1 878 aaPredicted RBP18.14■□□□□ 0.49
ABCC1-201ENST00000399408 KLHL34Q8N239 644 aa18.14■□□□□ 0.49
ABCC1-201ENST00000399408 MCM4P33991 863 aa18.14■□□□□ 0.49
ABCC1-201ENST00000399408 ME1P48163 572 aa18.14■□□□□ 0.49
ABCC1-201ENST00000399408 FILIP1LQ4L180 1135 aa18.14■□□□□ 0.49
ABCC1-201ENST00000399408 LARP1Q6PKG0 1096 aaKnown RBP18.14■□□□□ 0.49
ABCC1-201ENST00000399408 TNMDQ9H2S6 317 aa18.14■□□□□ 0.49
ABCC1-201ENST00000399408 OFD1O75665 1012 aa18.13■□□□□ 0.49
ABCC1-201ENST00000399408 GLRX3O76003 335 aaKnown RBP18.13■□□□□ 0.49
ABCC1-201ENST00000399408 ZNF771Q7L3S4 317 aaPredicted RBP18.13■□□□□ 0.49
ABCC1-201ENST00000399408 PIP4K2AP48426 406 aaPredicted RBP18.13■□□□□ 0.49
ABCC1-201ENST00000399408 CDK5RAP3Q96JB5 506 aa18.13■□□□□ 0.49
ABCC1-201ENST00000399408 CDKL5O76039 1030 aa18.12■□□□□ 0.49
ABCC1-201ENST00000399408 BRPF3Q9ULD4 1205 aa18.12■□□□□ 0.49
ABCC1-201ENST00000399408 STARD3NLO95772 234 aa18.12■□□□□ 0.49
ABCC1-201ENST00000399408 PDIA4P13667 645 aaKnown RBP18.12■□□□□ 0.49
ABCC1-201ENST00000399408 SMARCA5O60264 1052 aaPredicted RBP18.11■□□□□ 0.49
ABCC1-201ENST00000399408 USHBP1Q8N6Y0 703 aa18.11■□□□□ 0.49
ABCC1-201ENST00000399408 ACBD3Q9H3P7 528 aa18.11■□□□□ 0.49
ABCC1-201ENST00000399408 GRPEL1Q9HAV7 217 aa18.11■□□□□ 0.49
ABCC1-201ENST00000399408 CCP110O43303 1012 aa18.1■□□□□ 0.49
ABCC1-201ENST00000399408 TRIM27P14373 513 aa18.1■□□□□ 0.49
ABCC1-201ENST00000399408 SPATA32Q96LK8 384 aa18.1■□□□□ 0.49
ABCC1-201ENST00000399408 TTC21BQ7Z4L5 1316 aa18.1■□□□□ 0.49
ABCC1-201ENST00000399408 NUP133Q8WUM0 1156 aa18.1■□□□□ 0.49
ABCC1-201ENST00000399408 STK11IPQ8N1F8 1099 aa18.1■□□□□ 0.49
ABCC1-201ENST00000399408 SMARCE1Q969G3 411 aa18.1■□□□□ 0.49
ABCC1-201ENST00000399408 CASTP20810 708 aaKnown RBP18.09■□□□□ 0.49
ABCC1-201ENST00000399408 MAGEC2Q9UBF1 373 aaPredicted RBP18.09■□□□□ 0.49
ABCC1-201ENST00000399408 ANKRD36BQ8N2N9 1353 aa18.09■□□□□ 0.49
ABCC1-201ENST00000399408 CFAP45Q9UL16 551 aa18.09■□□□□ 0.49
ABCC1-201ENST00000399408 TDO2P48775 406 aa18.09■□□□□ 0.49
ABCC1-201ENST00000399408 CT47A1Q5JQC4 288 aaPredicted RBP18.09■□□□□ 0.49
ABCC1-201ENST00000399408 RUFY1Q96T51 708 aa18.09■□□□□ 0.49
ABCC1-201ENST00000399408 UGGT2Q9NYU1 1516 aa18.09■□□□□ 0.49
ABCC1-201ENST00000399408 F6X3S4 739 aa18.08■□□□□ 0.49
ABCC1-201ENST00000399408 DNAAF4Q8WXU2 420 aa18.08■□□□□ 0.49
ABCC1-201ENST00000399408 PTPRCP08575 1304 aa18.08■□□□□ 0.49
ABCC1-201ENST00000399408 IGHMBP2P38935 993 aaKnown RBP18.08■□□□□ 0.49
ABCC1-201ENST00000399408 DHX8Q14562 1220 aaKnown RBP18.08■□□□□ 0.48
ABCC1-201ENST00000399408 CCDC85AQ96PX6 553 aaPredicted RBP18.08■□□□□ 0.48
ABCC1-201ENST00000399408 PTPRKQ15262 1439 aa18.08■□□□□ 0.48
ABCC1-201ENST00000399408 KDM5BQ9UGL1 1544 aa18.08■□□□□ 0.48
ABCC1-201ENST00000399408 UBAC1Q9BSL1 405 aa18.08■□□□□ 0.48
ABCC1-201ENST00000399408 DACH1Q9UI36 760 aa18.08■□□□□ 0.48
ABCC1-201ENST00000399408 RAI14Q9P0K7 980 aa18.07■□□□□ 0.48
ABCC1-201ENST00000399408 MYD88Q99836 296 aa18.07■□□□□ 0.48
ABCC1-201ENST00000399408 AKAP2Q9Y2D5 859 aa18.07■□□□□ 0.48
ABCC1-201ENST00000399408 SETQ01105 290 aaPredicted RBP18.07■□□□□ 0.48
ABCC1-201ENST00000399408 IMMTQ16891 758 aaKnown RBP18.07■□□□□ 0.48
ABCC1-201ENST00000399408 SPC24Q8NBT2 197 aa18.07■□□□□ 0.48
ABCC1-201ENST00000399408 IDH1O75874 414 aaKnown RBP18.07■□□□□ 0.48
ABCC1-201ENST00000399408 NOL7Q9UMY1 257 aaKnown RBP18.07■□□□□ 0.48
ABCC1-201ENST00000399408 CCAR1Q8IX12 1150 aaKnown RBP18.07■□□□□ 0.48
ABCC1-201ENST00000399408 TMOD3Q9NYL9 352 aa18.07■□□□□ 0.48
ABCC1-201ENST00000399408 IL16Q14005 1332 aa18.07■□□□□ 0.48
ABCC1-201ENST00000399408 PTCD1O75127 700 aaKnown RBP18.07■□□□□ 0.48
ABCC1-201ENST00000399408 SKAP1Q86WV1 359 aa18.07■□□□□ 0.48
ABCC1-201ENST00000399408 VSIG10Q8N0Z9 540 aa18.07■□□□□ 0.48
ABCC1-201ENST00000399408 SERPINC1P01008 464 aa18.06■□□□□ 0.48
ABCC1-201ENST00000399408 MPRIPQ6WCQ1 1025 aa18.06■□□□□ 0.48
ABCC1-201ENST00000399408 AK7Q96M32 723 aa18.06■□□□□ 0.48
ABCC1-201ENST00000399408 HSP90B2PQ58FF3 399 aa18.06■□□□□ 0.48
ABCC1-201ENST00000399408 DBF4Q9UBU7 674 aaPredicted RBP18.06■□□□□ 0.48
ABCC1-201ENST00000399408 RAPGEF6Q8TEU7 1601 aa18.06■□□□□ 0.48
ABCC1-201ENST00000399408 FOXO3O43524 673 aa18.06■□□□□ 0.48
ABCC1-201ENST00000399408 HMGN5P82970 282 aaKnown RBP18.06■□□□□ 0.48
ABCC1-201ENST00000399408 METTL24Q5JXM2 366 aa18.06■□□□□ 0.48
ABCC1-201ENST00000399408 LRP2BPQ9P2M1 347 aa18.06■□□□□ 0.48
ABCC1-201ENST00000399408 RALGAPBQ86X10 1494 aa18.06■□□□□ 0.48
ABCC1-201ENST00000399408 AIDAQ96BJ3 306 aa18.06■□□□□ 0.48
ABCC1-201ENST00000399408 KRT18P05783 430 aaKnown RBP18.05■□□□□ 0.48
ABCC1-201ENST00000399408 BRPF1P55201 1214 aaPredicted RBP18.05■□□□□ 0.48
ABCC1-201ENST00000399408 PRPF40BQ6NWY9 871 aaKnown RBP18.05■□□□□ 0.48
ABCC1-201ENST00000399408 CAGE1Q8TC20 777 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms