RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 BAZ1AQ9NRL2 1556 aaPredicted RBP13.59□□□□□ -0.23
HLCS-202ENST00000399120 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
HLCS-202ENST00000399120 TATP17735 454 aaPredicted RBP13.59□□□□□ -0.23
HLCS-202ENST00000399120 BCCIPQ9P287 314 aaKnown RBP eCLIP13.59□□□□□ -0.23
HLCS-202ENST00000399120 PDS5BQ9NTI5 1447 aa13.59□□□□□ -0.23
HLCS-202ENST00000399120 KIF2AO00139 706 aaPredicted RBP13.59□□□□□ -0.23
HLCS-202ENST00000399120 MAPK8IP2Q13387 824 aaPredicted RBP13.59□□□□□ -0.23
HLCS-202ENST00000399120 CABP2Q9NPB3 220 aa13.59□□□□□ -0.23
HLCS-202ENST00000399120 ABTB2Q8N961 1025 aa13.58□□□□□ -0.23
HLCS-202ENST00000399120 DDX23Q9BUQ8 820 aaKnown RBP13.58□□□□□ -0.23
HLCS-202ENST00000399120 ZSCAN12O43309 604 aa13.58□□□□□ -0.24
HLCS-202ENST00000399120 KIF5CO60282 957 aa13.58□□□□□ -0.24
HLCS-202ENST00000399120 RNF187Q5TA31 235 aaPredicted RBP13.58□□□□□ -0.24
HLCS-202ENST00000399120 CACNA2D4Q7Z3S7 1137 aa13.58□□□□□ -0.24
HLCS-202ENST00000399120 CABP4P57796 275 aa13.58□□□□□ -0.24
HLCS-202ENST00000399120 HDGFL1Q5TGJ6 251 aa13.58□□□□□ -0.24
HLCS-202ENST00000399120 SRCIN1Q9C0H9 1055 aa13.58□□□□□ -0.24
HLCS-202ENST00000399120 DDX11Q96FC9 970 aa13.58□□□□□ -0.24
HLCS-202ENST00000399120 KRT32Q14532 448 aa13.58□□□□□ -0.24
HLCS-202ENST00000399120 JAKMIP1Q96N16 626 aaKnown RBP13.58□□□□□ -0.24
HLCS-202ENST00000399120 STRN4Q9NRL3 753 aa13.58□□□□□ -0.24
HLCS-202ENST00000399120 RAI14Q9P0K7 980 aa13.58□□□□□ -0.24
HLCS-202ENST00000399120 CNTLNQ9NXG0 1405 aa13.57□□□□□ -0.24
HLCS-202ENST00000399120 EXOSC9Q06265 439 aaKnown RBP13.57□□□□□ -0.24
HLCS-202ENST00000399120 NOB1Q9ULX3 412 aaKnown RBP13.57□□□□□ -0.24
HLCS-202ENST00000399120 CCDC150Q8NCX0 1101 aa13.57□□□□□ -0.24
HLCS-202ENST00000399120 RRBP1Q9P2E9 1410 aaKnown RBP13.57□□□□□ -0.24
HLCS-202ENST00000399120 MAP3K11Q16584 847 aa13.57□□□□□ -0.24
HLCS-202ENST00000399120 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
HLCS-202ENST00000399120 AACSQ86V21 672 aa13.57□□□□□ -0.24
HLCS-202ENST00000399120 CCDC175P0C221 793 aa13.56□□□□□ -0.24
HLCS-202ENST00000399120 MTHFSP49914 203 aa13.56□□□□□ -0.24
HLCS-202ENST00000399120 PTPN14Q15678 1187 aa13.56□□□□□ -0.24
HLCS-202ENST00000399120 TCP11L2Q8N4U5 519 aa13.56□□□□□ -0.24
HLCS-202ENST00000399120 SEC63Q9UGP8 760 aaKnown RBP13.56□□□□□ -0.24
HLCS-202ENST00000399120 PRKAR2BP31323 418 aa13.56□□□□□ -0.24
HLCS-202ENST00000399120 KIF4BQ2VIQ3 1234 aa13.56□□□□□ -0.24
HLCS-202ENST00000399120 TMOD2Q9NZR1 351 aa13.56□□□□□ -0.24
HLCS-202ENST00000399120 PDIA4P13667 645 aaKnown RBP13.55□□□□□ -0.24
HLCS-202ENST00000399120 CTNNA2P26232 953 aa13.55□□□□□ -0.24
HLCS-202ENST00000399120 PNISRQ8TF01 805 aaKnown RBP13.55□□□□□ -0.24
HLCS-202ENST00000399120 FERP16591 822 aa13.55□□□□□ -0.24
HLCS-202ENST00000399120 SFPQP23246 707 aaKnown RBP eCLIP13.55□□□□□ -0.24
HLCS-202ENST00000399120 PAFAH1B1P43034 410 aa13.55□□□□□ -0.24
HLCS-202ENST00000399120 FAM107BQ9H098 131 aa13.55□□□□□ -0.24
HLCS-202ENST00000399120 TAOK3Q9H2K8 898 aa13.55□□□□□ -0.24
HLCS-202ENST00000399120 LRP2BPQ9P2M1 347 aa13.55□□□□□ -0.24
HLCS-202ENST00000399120 MACROD2A1Z1Q3 448 aa13.55□□□□□ -0.24
HLCS-202ENST00000399120 RRP9O43818 475 aaKnown RBP13.55□□□□□ -0.24
HLCS-202ENST00000399120 FGFR1OPO95684 399 aaKnown RBP13.55□□□□□ -0.24
HLCS-202ENST00000399120 PABPN1LA6NDY0 278 aaKnown RBP13.55□□□□□ -0.24
HLCS-202ENST00000399120 CHMP4BP1P59074 171 aa13.55□□□□□ -0.24
HLCS-202ENST00000399120 GIGYF2Q6Y7W6 1299 aaKnown RBP13.54□□□□□ -0.24
HLCS-202ENST00000399120 UBA5Q9GZZ9 404 aa13.54□□□□□ -0.24
HLCS-202ENST00000399120 HOMER2Q9NSB8 354 aa13.54□□□□□ -0.24
HLCS-202ENST00000399120 USO1O60763 962 aaKnown RBP13.54□□□□□ -0.24
HLCS-202ENST00000399120 SPECC1Q5M775 1068 aa13.54□□□□□ -0.24
HLCS-202ENST00000399120 PODXL2Q9NZ53 605 aa13.54□□□□□ -0.24
HLCS-202ENST00000399120 ADAMTS8Q9UP79 889 aa13.54□□□□□ -0.24
HLCS-202ENST00000399120 TMEM87AQ8NBN3 555 aa13.54□□□□□ -0.24
HLCS-202ENST00000399120 MYL6BP14649 208 aa13.54□□□□□ -0.24
HLCS-202ENST00000399120 JPH4Q96JJ6 628 aa13.54□□□□□ -0.24
HLCS-202ENST00000399120 CFAP57Q96MR6 1250 aa13.54□□□□□ -0.24
HLCS-202ENST00000399120 URI1O94763 535 aaPredicted RBP13.53□□□□□ -0.24
HLCS-202ENST00000399120 CWC27Q6UX04 472 aaKnown RBP13.53□□□□□ -0.24
HLCS-202ENST00000399120 FERMT2Q96AC1 680 aa13.53□□□□□ -0.24
HLCS-202ENST00000399120 PUS7Q96PZ0 661 aaKnown RBP13.53□□□□□ -0.24
HLCS-202ENST00000399120 PSMD1Q99460 953 aa13.53□□□□□ -0.24
HLCS-202ENST00000399120 ZNF287Q9HBT7 754 aa13.53□□□□□ -0.24
HLCS-202ENST00000399120 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
HLCS-202ENST00000399120 ESCO1Q5FWF5 840 aa13.53□□□□□ -0.24
HLCS-202ENST00000399120 CEP126Q9P2H0 1117 aa13.53□□□□□ -0.24
HLCS-202ENST00000399120 C6orf163Q5TEZ5 329 aa13.53□□□□□ -0.24
HLCS-202ENST00000399120 KIF18AQ8NI77 898 aa13.53□□□□□ -0.24
HLCS-202ENST00000399120 ZNF428Q96B54 188 aa13.53□□□□□ -0.24
HLCS-202ENST00000399120 DNA2P51530 1060 aa13.52□□□□□ -0.24
HLCS-202ENST00000399120 KLHL10Q6JEL2 608 aa13.52□□□□□ -0.24
HLCS-202ENST00000399120 NACADO15069 1562 aa13.52□□□□□ -0.24
HLCS-202ENST00000399120 PDE3AQ14432 1141 aa13.52□□□□□ -0.24
HLCS-202ENST00000399120 TSNARE1Q96NA8 513 aa13.52□□□□□ -0.24
HLCS-202ENST00000399120 ESPNB1AK53 854 aa13.52□□□□□ -0.25
HLCS-202ENST00000399120 CAMK4Q16566 473 aa13.52□□□□□ -0.25
HLCS-202ENST00000399120 CCDC83Q8IWF9 413 aa13.52□□□□□ -0.25
HLCS-202ENST00000399120 AIDAQ96BJ3 306 aa13.52□□□□□ -0.25
HLCS-202ENST00000399120 STAC3Q96MF2 364 aa13.52□□□□□ -0.25
HLCS-202ENST00000399120 TOP1P11387 765 aaKnown RBP13.52□□□□□ -0.25
HLCS-202ENST00000399120 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.52□□□□□ -0.25
HLCS-202ENST00000399120 BRD4O60885 1362 aaPredicted RBP13.52□□□□□ -0.25
HLCS-202ENST00000399120 FSD2A1L4K1 749 aa13.52□□□□□ -0.25
HLCS-202ENST00000399120 ANO10Q9NW15 660 aa13.52□□□□□ -0.25
HLCS-202ENST00000399120 IL27Q8NEV9 243 aa13.51□□□□□ -0.25
HLCS-202ENST00000399120 NAA15Q9BXJ9 866 aaKnown RBP13.51□□□□□ -0.25
HLCS-202ENST00000399120 SPG7Q9UQ90 795 aa13.51□□□□□ -0.25
HLCS-202ENST00000399120 SPECC1LQ69YQ0 1117 aa13.51□□□□□ -0.25
HLCS-202ENST00000399120 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
HLCS-202ENST00000399120 RAPGEF2Q9Y4G8 1499 aa13.51□□□□□ -0.25
HLCS-202ENST00000399120 IDH1O75874 414 aaKnown RBP13.51□□□□□ -0.25
HLCS-202ENST00000399120 IGHMBP2P38935 993 aaKnown RBP13.51□□□□□ -0.25
HLCS-202ENST00000399120 TDRD12Q587J7 1177 aaKnown RBP13.51□□□□□ -0.25
HLCS-202ENST00000399120 SPINK5Q9NQ38 1064 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms